EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000003257 (Gene tree)
Gene ID: -
Gene Symbol: ddx28
Alias: zgc:153386
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 28
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 3836 bases
Position: chrBDQW01000003.1:6128013-6131848
Accession: ZDB-GENE-061013-64
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000004367	DEAD	PF00270.29	9.6e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000004462	-	1704	-	ENSSDUP00000004367	567 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000003257's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000003257's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000003257	ddx28	64	32.787	ENSSDUG00000012334	ddx1	57	32.787
ENSSDUG00000003257	ddx28	64	30.601	ENSSDUG00000016136	-	70	30.601
ENSSDUG00000003257	ddx28	68	30.964	ENSSDUG00000020120	ddx43	51	30.102

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000003257	ddx28	89	46.911	ENSG00000182810	DDX28	94	47.490	Homo_sapiens
ENSSDUG00000003257	ddx28	99	80.282	ENSAPOG00000000991	ddx28	98	80.282	Acanthochromis_polyacanthus
ENSSDUG00000003257	ddx28	89	47.276	ENSAMEG00000019426	DDX28	94	47.860	Ailuropoda_melanoleuca
ENSSDUG00000003257	ddx28	99	80.851	ENSACIG00000021615	ddx28	99	80.851	Amphilophus_citrinellus
ENSSDUG00000003257	ddx28	99	81.129	ENSAOCG00000004610	ddx28	98	81.129	Amphiprion_ocellaris
ENSSDUG00000003257	ddx28	99	81.129	ENSAPEG00000002143	ddx28	98	81.129	Amphiprion_percula
ENSSDUG00000003257	ddx28	99	82.218	ENSATEG00000018691	ddx28	100	82.218	Anabas_testudineus
ENSSDUG00000003257	ddx28	89	45.401	ENSACAG00000009755	DDX28	93	45.401	Anolis_carolinensis
ENSSDUG00000003257	ddx28	98	76.523	ENSACLG00000012984	ddx28	99	76.523	Astatotilapia_calliptera
ENSSDUG00000003257	ddx28	99	59.622	ENSAMXG00000005878	ddx28	100	59.622	Astyanax_mexicanus
ENSSDUG00000003257	ddx28	89	47.758	ENSBTAG00000004290	DDX28	92	47.758	Bos_taurus
ENSSDUG00000003257	ddx28	92	45.779	ENSCAFG00000020327	DDX28	98	46.341	Canis_familiaris
ENSSDUG00000003257	ddx28	92	45.779	ENSCAFG00020019785	DDX28	98	46.341	Canis_lupus_dingo
ENSSDUG00000003257	ddx28	89	48.047	ENSCHIG00000009658	DDX28	92	48.047	Capra_hircus
ENSSDUG00000003257	ddx28	89	48.242	ENSCPOG00000013746	DDX28	94	48.242	Cavia_porcellus
ENSSDUG00000003257	ddx28	89	47.969	ENSCSAG00000018472	DDX28	92	47.969	Chlorocebus_sabaeus
ENSSDUG00000003257	ddx28	81	49.460	ENSCPBG00000012105	DDX28	81	52.099	Chrysemys_picta_bellii
ENSSDUG00000003257	ddx28	66	36.623	ENSCSAVG00000006341	-	98	36.883	Ciona_savignyi
ENSSDUG00000003257	ddx28	86	48.193	ENSCGRG00001024412	Ddx28	93	48.497	Cricetulus_griseus_chok1gshd
ENSSDUG00000003257	ddx28	98	71.631	ENSCSEG00000011651	ddx28	99	71.631	Cynoglossus_semilaevis
ENSSDUG00000003257	ddx28	99	74.517	ENSCVAG00000004044	ddx28	100	74.517	Cyprinodon_variegatus
ENSSDUG00000003257	ddx28	98	62.923	ENSDARG00000060411	ddx28	98	62.923	Danio_rerio
ENSSDUG00000003257	ddx28	64	55.014	ENSDNOG00000033593	DDX28	99	55.014	Dasypus_novemcinctus
ENSSDUG00000003257	ddx28	84	48.171	ENSDORG00000028868	Ddx28	93	47.115	Dipodomys_ordii
ENSSDUG00000003257	ddx28	82	37.204	FBgn0086130	Dbp21E2	84	36.989	Drosophila_melanogaster
ENSSDUG00000003257	ddx28	89	48.155	ENSETEG00000001062	-	93	48.155	Echinops_telfairi
ENSSDUG00000003257	ddx28	72	42.328	ENSEBUG00000004791	ddx28	76	40.865	Eptatretus_burgeri
ENSSDUG00000003257	ddx28	89	47.582	ENSEASG00005020387	DDX28	99	46.225	Equus_asinus_asinus
ENSSDUG00000003257	ddx28	89	47.776	ENSECAG00000006451	DDX28	93	48.054	Equus_caballus
ENSSDUG00000003257	ddx28	72	41.247	ENSEEUG00000005017	DDX28	95	41.966	Erinaceus_europaeus
ENSSDUG00000003257	ddx28	90	70.428	ENSELUG00000005302	ddx28	99	69.540	Esox_lucius
ENSSDUG00000003257	ddx28	95	47.339	ENSFCAG00000012858	DDX28	99	47.339	Felis_catus
ENSSDUG00000003257	ddx28	99	71.958	ENSFHEG00000012573	ddx28	99	71.958	Fundulus_heteroclitus
ENSSDUG00000003257	ddx28	92	70.732	ENSGMOG00000017045	ddx28	99	70.919	Gadus_morhua
ENSSDUG00000003257	ddx28	90	43.916	ENSGALG00000048700	DDX28	89	43.833	Gallus_gallus
ENSSDUG00000003257	ddx28	98	74.643	ENSGAFG00000009249	ddx28	99	74.643	Gambusia_affinis
ENSSDUG00000003257	ddx28	95	78.771	ENSGACG00000016367	ddx28	99	78.771	Gasterosteus_aculeatus
ENSSDUG00000003257	ddx28	79	46.341	ENSGAGG00000004565	DDX28	98	46.341	Gopherus_agassizii
ENSSDUG00000003257	ddx28	89	47.104	ENSGGOG00000001220	DDX28	94	47.683	Gorilla_gorilla
ENSSDUG00000003257	ddx28	98	79.928	ENSHBUG00000001016	ddx28	99	79.928	Haplochromis_burtoni
ENSSDUG00000003257	ddx28	98	71.607	ENSHCOG00000017590	ddx28	98	71.607	Hippocampus_comes
ENSSDUG00000003257	ddx28	99	61.606	ENSIPUG00000017350	Ddx28	100	61.606	Ictalurus_punctatus
ENSSDUG00000003257	ddx28	89	47.481	ENSSTOG00000002064	DDX28	94	47.481	Ictidomys_tridecemlineatus
ENSSDUG00000003257	ddx28	89	47.767	ENSJJAG00000012460	-	93	47.767	Jaculus_jaculus
ENSSDUG00000003257	ddx28	99	73.944	ENSKMAG00000018183	ddx28	99	74.074	Kryptolebias_marmoratus
ENSSDUG00000003257	ddx28	98	79.610	ENSLBEG00000006072	ddx28	99	79.610	Labrus_bergylta
ENSSDUG00000003257	ddx28	95	55.249	ENSLACG00000005578	DDX28	93	55.249	Latimeria_chalumnae
ENSSDUG00000003257	ddx28	90	62.257	ENSLOCG00000017604	ddx28	91	62.257	Lepisosteus_oculatus
ENSSDUG00000003257	ddx28	89	48.837	ENSLAFG00000031239	DDX28	93	48.837	Loxodonta_africana
ENSSDUG00000003257	ddx28	89	47.969	ENSMMUG00000010836	DDX28	92	47.969	Macaca_mulatta
ENSSDUG00000003257	ddx28	98	78.253	ENSMAMG00000020220	ddx28	98	78.253	Mastacembelus_armatus
ENSSDUG00000003257	ddx28	98	80.108	ENSMZEG00005009292	ddx28	99	80.108	Maylandia_zebra
ENSSDUG00000003257	ddx28	89	38.372	ENSMICG00000012346	-	93	38.178	Microcebus_murinus
ENSSDUG00000003257	ddx28	89	48.544	ENSMOCG00000009815	Ddx28	93	48.544	Microtus_ochrogaster
ENSSDUG00000003257	ddx28	99	76.554	ENSMMOG00000000270	ddx28	100	76.554	Mola_mola
ENSSDUG00000003257	ddx28	89	48.431	ENSMODG00000005303	DDX28	92	49.020	Monodelphis_domestica
ENSSDUG00000003257	ddx28	99	79.541	ENSMALG00000008864	ddx28	99	79.541	Monopterus_albus
ENSSDUG00000003257	ddx28	89	47.379	MGP_CAROLIEiJ_G0031510	Ddx28	93	47.379	Mus_caroli
ENSSDUG00000003257	ddx28	89	47.379	ENSMUSG00000045538	Ddx28	93	47.379	Mus_musculus
ENSSDUG00000003257	ddx28	89	47.184	MGP_PahariEiJ_G0023110	Ddx28	93	47.184	Mus_pahari
ENSSDUG00000003257	ddx28	89	47.573	MGP_SPRETEiJ_G0032628	Ddx28	93	47.573	Mus_spretus
ENSSDUG00000003257	ddx28	65	50.938	ENSMPUG00000006915	DDX28	92	50.938	Mustela_putorius_furo
ENSSDUG00000003257	ddx28	88	47.929	ENSMLUG00000005899	DDX28	92	48.323	Myotis_lucifugus
ENSSDUG00000003257	ddx28	89	48.842	ENSNGAG00000015762	Ddx28	93	48.649	Nannospalax_galili
ENSSDUG00000003257	ddx28	98	80.072	ENSNBRG00000001337	ddx28	100	80.072	Neolamprologus_brichardi
ENSSDUG00000003257	ddx28	99	80.392	ENSONIG00000020597	ddx28	99	80.392	Oreochromis_niloticus
ENSSDUG00000003257	ddx28	51	52.740	ENSOANG00000003551	-	98	53.357	Ornithorhynchus_anatinus
ENSSDUG00000003257	ddx28	89	48.242	ENSOCUG00000023074	DDX28	93	48.242	Oryctolagus_cuniculus
ENSSDUG00000003257	ddx28	98	74.735	ENSORLG00000011968	ddx28	99	74.867	Oryzias_latipes
ENSSDUG00000003257	ddx28	98	75.179	ENSORLG00020001951	ddx28	99	75.179	Oryzias_latipes_hni
ENSSDUG00000003257	ddx28	98	75.893	ENSORLG00015023030	ddx28	99	75.893	Oryzias_latipes_hsok
ENSSDUG00000003257	ddx28	99	75.133	ENSOMEG00000012445	ddx28	99	75.133	Oryzias_melastigma
ENSSDUG00000003257	ddx28	89	48.170	ENSOGAG00000016895	DDX28	94	48.170	Otolemur_garnettii
ENSSDUG00000003257	ddx28	78	46.563	ENSOARG00000003313	DDX28	99	46.563	Ovis_aries
ENSSDUG00000003257	ddx28	89	45.349	ENSPPAG00000036971	DDX28	93	45.349	Pan_paniscus
ENSSDUG00000003257	ddx28	95	47.523	ENSPPRG00000018322	DDX28	99	47.523	Panthera_pardus
ENSSDUG00000003257	ddx28	95	46.055	ENSPTIG00000006444	DDX28	99	46.055	Panthera_tigris_altaica
ENSSDUG00000003257	ddx28	89	47.490	ENSPTRG00000008258	DDX28	94	47.490	Pan_troglodytes
ENSSDUG00000003257	ddx28	93	64.540	ENSPKIG00000021200	ddx28	98	64.540	Paramormyrops_kingsleyae
ENSSDUG00000003257	ddx28	50	56.294	ENSPSIG00000001127	DDX28	95	56.294	Pelodiscus_sinensis
ENSSDUG00000003257	ddx28	96	70.201	ENSPMGG00000007908	ddx28	97	70.201	Periophthalmus_magnuspinnatus
ENSSDUG00000003257	ddx28	89	47.389	ENSPEMG00000003395	Ddx28	93	47.389	Peromyscus_maniculatus_bairdii
ENSSDUG00000003257	ddx28	98	74.911	ENSPFOG00000020838	DDX28	99	74.911	Poecilia_formosa
ENSSDUG00000003257	ddx28	98	74.911	ENSPFOG00000020952	ddx28	98	74.911	Poecilia_formosa
ENSSDUG00000003257	ddx28	98	74.377	ENSPLAG00000016292	ddx28	98	74.377	Poecilia_latipinna
ENSSDUG00000003257	ddx28	98	74.911	ENSPMEG00000011311	ddx28	97	74.911	Poecilia_mexicana
ENSSDUG00000003257	ddx28	98	74.733	ENSPREG00000002899	ddx28	98	74.733	Poecilia_reticulata
ENSSDUG00000003257	ddx28	89	47.184	ENSPPYG00000007481	DDX28	94	47.767	Pongo_abelii
ENSSDUG00000003257	ddx28	89	47.961	ENSPCOG00000024632	DDX28	93	47.961	Propithecus_coquereli
ENSSDUG00000003257	ddx28	98	80.108	ENSPNYG00000018804	ddx28	99	80.108	Pundamilia_nyererei
ENSSDUG00000003257	ddx28	91	63.168	ENSPNAG00000014597	ddx28	96	63.168	Pygocentrus_nattereri
ENSSDUG00000003257	ddx28	89	47.379	ENSRNOG00000019817	Ddx28	93	47.379	Rattus_norvegicus
ENSSDUG00000003257	ddx28	89	64.314	ENSSFOG00015010181	ddx28	92	64.314	Scleropages_formosus
ENSSDUG00000003257	ddx28	91	84.170	ENSSMAG00000006831	ddx28	97	84.170	Scophthalmus_maximus
ENSSDUG00000003257	ddx28	100	98.765	ENSSLDG00000004513	ddx28	100	98.765	Seriola_lalandi_dorsalis
ENSSDUG00000003257	ddx28	89	47.750	ENSSARG00000014169	DDX28	93	48.141	Sorex_araneus
ENSSDUG00000003257	ddx28	99	80.247	ENSSPAG00000000988	ddx28	99	80.247	Stegastes_partitus
ENSSDUG00000003257	ddx28	89	47.379	ENSSSCG00000026038	DDX28	93	47.573	Sus_scrofa
ENSSDUG00000003257	ddx28	99	70.796	ENSTRUG00000007815	ddx28	100	70.796	Takifugu_rubripes
ENSSDUG00000003257	ddx28	89	74.753	ENSTNIG00000011352	ddx28	100	74.753	Tetraodon_nigroviridis
ENSSDUG00000003257	ddx28	72	60.465	ENSTBEG00000017695	DDX28	76	60.465	Tupaia_belangeri
ENSSDUG00000003257	ddx28	89	47.184	ENSUAMG00000016116	DDX28	94	47.767	Ursus_americanus
ENSSDUG00000003257	ddx28	77	49.213	ENSUMAG00000019200	DDX28	89	49.888	Ursus_maritimus
ENSSDUG00000003257	ddx28	77	41.084	ENSVVUG00000012876	DDX28	86	41.761	Vulpes_vulpes
ENSSDUG00000003257	ddx28	90	46.875	ENSXETG00000005435	ddx28	99	46.875	Xenopus_tropicalis
ENSSDUG00000003257	ddx28	96	75.636	ENSXCOG00000012364	ddx28	96	75.636	Xiphophorus_couchianus
ENSSDUG00000003257	ddx28	91	78.571	ENSXMAG00000019603	ddx28	93	78.571	Xiphophorus_maculatus