EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000003299 (Gene tree)
Gene ID: 111226492
Gene Symbol: prpf19
Alias: fb18f09|prp19|wu:fb18f09|zgc:56158
Full Name: pre-mRNA processing factor 19
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 6853 bases
Position: chrBDQW01000160.1:331689-338541
Accession: 111226492
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000004504	Prp19	PF08606.11	1.5e-33	1	1
ENSSDUP00000004471	Prp19	PF08606.11	1.6e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000004567	-	3522	XM_022751672	ENSSDUP00000004471	505 (aa)	XP_022607393	UPI0008746A69
ENSSDUT00000004598	-	1473	-	ENSSDUP00000004504	490 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000003299's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03040	Spliceosome	KEGG
sdu04120	Ubiquitin mediated proteolysis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000003299's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000003299	prpf19	54	30.252	ENSSDUG00000016161	POC1A	61	30.252

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000003299	prpf19	100	85.545	ENSG00000110107	PRPF19	100	88.571	Homo_sapiens
ENSSDUG00000003299	prpf19	100	99.208	ENSAPOG00000017823	prpf19	100	99.208	Acanthochromis_polyacanthus
ENSSDUG00000003299	prpf19	100	85.341	ENSAMEG00000007375	PRPF19	99	85.341	Ailuropoda_melanoleuca
ENSSDUG00000003299	prpf19	99	97.024	ENSACIG00000015876	prpf19	99	97.024	Amphilophus_citrinellus
ENSSDUG00000003299	prpf19	100	99.208	ENSAOCG00000020444	prpf19	100	99.208	Amphiprion_ocellaris
ENSSDUG00000003299	prpf19	100	99.208	ENSAPEG00000016076	prpf19	100	99.208	Amphiprion_percula
ENSSDUG00000003299	prpf19	100	99.406	ENSATEG00000008840	prpf19	100	99.406	Anabas_testudineus
ENSSDUG00000003299	prpf19	100	86.139	ENSACAG00000017797	PRPF19	100	86.139	Anolis_carolinensis
ENSSDUG00000003299	prpf19	72	31.746	ENSANAG00000018849	WDR36	59	31.746	Aotus_nancymaae
ENSSDUG00000003299	prpf19	100	85.347	ENSANAG00000021762	PRPF19	100	85.347	Aotus_nancymaae
ENSSDUG00000003299	prpf19	100	98.218	ENSACLG00000009416	prpf19	100	98.276	Astatotilapia_calliptera
ENSSDUG00000003299	prpf19	100	95.644	ENSAMXG00000011547	prpf19	100	95.644	Astyanax_mexicanus
ENSSDUG00000003299	prpf19	100	85.545	ENSBTAG00000014366	PRPF19	100	85.545	Bos_taurus
ENSSDUG00000003299	prpf19	100	52.860	WBGene00020423	prp-19	100	52.860	Caenorhabditis_elegans
ENSSDUG00000003299	prpf19	100	85.347	ENSCJAG00000016509	PRPF19	100	85.347	Callithrix_jacchus
ENSSDUG00000003299	prpf19	100	85.545	ENSCAFG00000016438	PRPF19	98	85.545	Canis_familiaris
ENSSDUG00000003299	prpf19	100	85.545	ENSCAFG00020012565	PRPF19	100	85.545	Canis_lupus_dingo
ENSSDUG00000003299	prpf19	100	85.545	ENSCHIG00000018281	PRPF19	100	85.545	Capra_hircus
ENSSDUG00000003299	prpf19	72	37.500	ENSTSYG00000003163	WDR36	59	37.500	Carlito_syrichta
ENSSDUG00000003299	prpf19	99	85.400	ENSTSYG00000006860	PRPF19	99	85.400	Carlito_syrichta
ENSSDUG00000003299	prpf19	99	85.800	ENSCAPG00000016225	PRPF19	100	85.800	Cavia_aperea
ENSSDUG00000003299	prpf19	100	85.743	ENSCPOG00000020688	PRPF19	100	85.743	Cavia_porcellus
ENSSDUG00000003299	prpf19	100	85.347	ENSCCAG00000025839	PRPF19	100	85.347	Cebus_capucinus
ENSSDUG00000003299	prpf19	72	32.540	ENSCCAG00000035644	WDR36	59	32.540	Cebus_capucinus
ENSSDUG00000003299	prpf19	100	85.545	ENSCATG00000041921	PRPF19	100	85.545	Cercocebus_atys
ENSSDUG00000003299	prpf19	99	85.944	ENSCLAG00000003338	PRPF19	100	85.944	Chinchilla_lanigera
ENSSDUG00000003299	prpf19	100	85.545	ENSCSAG00000006254	PRPF19	100	85.545	Chlorocebus_sabaeus
ENSSDUG00000003299	prpf19	64	75.962	ENSCHOG00000005840	PRPF19	100	75.962	Choloepus_hoffmanni
ENSSDUG00000003299	prpf19	100	86.199	ENSCPBG00000027061	PRPF19	100	84.950	Chrysemys_picta_bellii
ENSSDUG00000003299	prpf19	99	68.707	ENSCING00000016625	-	100	68.707	Ciona_intestinalis
ENSSDUG00000003299	prpf19	100	69.170	ENSCSAVG00000002027	-	100	69.565	Ciona_savignyi
ENSSDUG00000003299	prpf19	72	35.294	ENSCANG00000034270	WDR36	58	35.294	Colobus_angolensis_palliatus
ENSSDUG00000003299	prpf19	99	82.895	ENSCANG00000027155	PRPF19	99	44.578	Colobus_angolensis_palliatus
ENSSDUG00000003299	prpf19	100	85.545	ENSCGRG00001002699	Prpf19	100	85.545	Cricetulus_griseus_chok1gshd
ENSSDUG00000003299	prpf19	56	34.118	ENSCGRG00001012983	Wdr36	53	34.118	Cricetulus_griseus_chok1gshd
ENSSDUG00000003299	prpf19	100	85.149	ENSCGRG00000008964	Prpf19	100	85.149	Cricetulus_griseus_crigri
ENSSDUG00000003299	prpf19	56	34.118	ENSCGRG00000013589	Wdr36	55	34.118	Cricetulus_griseus_crigri
ENSSDUG00000003299	prpf19	100	98.614	ENSCSEG00000010411	prpf19	100	98.614	Cynoglossus_semilaevis
ENSSDUG00000003299	prpf19	100	96.634	ENSCVAG00000012011	prpf19	100	96.634	Cyprinodon_variegatus
ENSSDUG00000003299	prpf19	100	94.455	ENSDARG00000015239	prpf19	100	94.455	Danio_rerio
ENSSDUG00000003299	prpf19	100	85.545	ENSDNOG00000005797	PRPF19	100	85.545	Dasypus_novemcinctus
ENSSDUG00000003299	prpf19	100	85.545	ENSDORG00000006906	Prpf19	100	85.545	Dipodomys_ordii
ENSSDUG00000003299	prpf19	100	66.863	FBgn0261119	Prp19	99	66.863	Drosophila_melanogaster
ENSSDUG00000003299	prpf19	100	74.455	ENSETEG00000012295	PRPF19	100	74.455	Echinops_telfairi
ENSSDUG00000003299	prpf19	83	78.860	ENSEBUG00000013075	prpf19	100	78.860	Eptatretus_burgeri
ENSSDUG00000003299	prpf19	100	85.744	ENSEASG00005008056	PRPF19	98	85.744	Equus_asinus_asinus
ENSSDUG00000003299	prpf19	100	85.347	ENSECAG00000007322	PRPF19	100	85.347	Equus_caballus
ENSSDUG00000003299	prpf19	100	92.475	ENSELUG00000020276	-	100	92.475	Esox_lucius
ENSSDUG00000003299	prpf19	100	88.119	ENSELUG00000004578	prpf19	100	88.119	Esox_lucius
ENSSDUG00000003299	prpf19	100	85.545	ENSFCAG00000013668	PRPF19	100	85.545	Felis_catus
ENSSDUG00000003299	prpf19	100	84.950	ENSFALG00000012084	PRPF19	100	84.950	Ficedula_albicollis
ENSSDUG00000003299	prpf19	84	85.106	ENSFDAG00000009420	PRPF19	96	85.106	Fukomys_damarensis
ENSSDUG00000003299	prpf19	100	96.832	ENSFHEG00000022135	prpf19	100	96.832	Fundulus_heteroclitus
ENSSDUG00000003299	prpf19	100	97.030	ENSGMOG00000014756	prpf19	100	97.030	Gadus_morhua
ENSSDUG00000003299	prpf19	100	85.149	ENSGALG00000036530	PRPF19	100	85.149	Gallus_gallus
ENSSDUG00000003299	prpf19	100	96.436	ENSGAFG00000008931	prpf19	100	96.436	Gambusia_affinis
ENSSDUG00000003299	prpf19	100	97.624	ENSGACG00000017976	prpf19	100	97.624	Gasterosteus_aculeatus
ENSSDUG00000003299	prpf19	100	85.149	ENSGAGG00000013328	PRPF19	100	85.149	Gopherus_agassizii
ENSSDUG00000003299	prpf19	100	85.545	ENSGGOG00000008648	PRPF19	100	85.545	Gorilla_gorilla
ENSSDUG00000003299	prpf19	100	98.218	ENSHBUG00000008394	prpf19	100	98.218	Haplochromis_burtoni
ENSSDUG00000003299	prpf19	100	85.545	ENSHGLG00000003934	PRPF19	100	85.545	Heterocephalus_glaber_female
ENSSDUG00000003299	prpf19	99	73.012	ENSHGLG00100010649	PRPF19	100	71.014	Heterocephalus_glaber_male
ENSSDUG00000003299	prpf19	100	96.238	ENSHCOG00000016720	prpf19	100	96.238	Hippocampus_comes
ENSSDUG00000003299	prpf19	100	95.446	ENSIPUG00000013084	prpf19	100	95.446	Ictalurus_punctatus
ENSSDUG00000003299	prpf19	100	85.149	ENSSTOG00000001598	PRPF19	100	85.149	Ictidomys_tridecemlineatus
ENSSDUG00000003299	prpf19	100	85.743	ENSJJAG00000020609	Prpf19	100	85.743	Jaculus_jaculus
ENSSDUG00000003299	prpf19	100	96.634	ENSKMAG00000010257	prpf19	100	96.634	Kryptolebias_marmoratus
ENSSDUG00000003299	prpf19	100	97.822	ENSLBEG00000027436	prpf19	100	97.822	Labrus_bergylta
ENSSDUG00000003299	prpf19	100	85.347	ENSLACG00000003434	PRPF19	100	85.347	Latimeria_chalumnae
ENSSDUG00000003299	prpf19	91	81.064	ENSLOCG00000008123	prpf19	100	81.064	Lepisosteus_oculatus
ENSSDUG00000003299	prpf19	100	82.375	ENSLAFG00000002644	PRPF19	100	82.375	Loxodonta_africana
ENSSDUG00000003299	prpf19	56	35.294	ENSLAFG00000009957	WDR36	51	35.294	Loxodonta_africana
ENSSDUG00000003299	prpf19	100	85.545	ENSMFAG00000036743	PRPF19	100	85.545	Macaca_fascicularis
ENSSDUG00000003299	prpf19	100	85.545	ENSMMUG00000014530	PRPF19	100	85.545	Macaca_mulatta
ENSSDUG00000003299	prpf19	100	85.545	ENSMNEG00000044485	PRPF19	100	85.545	Macaca_nemestrina
ENSSDUG00000003299	prpf19	100	85.545	ENSMLEG00000043312	PRPF19	100	85.545	Mandrillus_leucophaeus
ENSSDUG00000003299	prpf19	100	99.010	ENSMAMG00000006843	prpf19	100	99.353	Mastacembelus_armatus
ENSSDUG00000003299	prpf19	100	98.218	ENSMZEG00005013356	prpf19	100	98.218	Maylandia_zebra
ENSSDUG00000003299	prpf19	98	80.600	ENSMGAG00000003180	PRPF19	100	80.600	Meleagris_gallopavo
ENSSDUG00000003299	prpf19	72	34.118	ENSMAUG00000018806	Wdr36	52	34.118	Mesocricetus_auratus
ENSSDUG00000003299	prpf19	100	84.950	ENSMAUG00000012585	Prpf19	100	84.950	Mesocricetus_auratus
ENSSDUG00000003299	prpf19	72	34.118	ENSMICG00000000645	WDR36	58	34.118	Microcebus_murinus
ENSSDUG00000003299	prpf19	100	85.545	ENSMICG00000011236	PRPF19	100	85.545	Microcebus_murinus
ENSSDUG00000003299	prpf19	100	85.545	ENSMOCG00000010383	Prpf19	100	85.545	Microtus_ochrogaster
ENSSDUG00000003299	prpf19	100	98.812	ENSMMOG00000003138	prpf19	100	98.812	Mola_mola
ENSSDUG00000003299	prpf19	100	85.545	ENSMODG00000020338	PRPF19	100	85.545	Monodelphis_domestica
ENSSDUG00000003299	prpf19	99	90.600	ENSMALG00000010981	prpf19	99	90.600	Monopterus_albus
ENSSDUG00000003299	prpf19	100	85.545	MGP_CAROLIEiJ_G0022704	Prpf19	100	85.545	Mus_caroli
ENSSDUG00000003299	prpf19	100	85.545	ENSMUSG00000024735	Prpf19	100	85.545	Mus_musculus
ENSSDUG00000003299	prpf19	100	85.545	MGP_PahariEiJ_G0014198	Prpf19	100	85.545	Mus_pahari
ENSSDUG00000003299	prpf19	100	85.545	MGP_SPRETEiJ_G0023618	Prpf19	100	85.545	Mus_spretus
ENSSDUG00000003299	prpf19	100	85.545	ENSMPUG00000014432	PRPF19	100	85.545	Mustela_putorius_furo
ENSSDUG00000003299	prpf19	100	82.885	ENSMLUG00000017597	PRPF19	100	82.885	Myotis_lucifugus
ENSSDUG00000003299	prpf19	100	85.743	ENSNGAG00000012671	Prpf19	100	85.743	Nannospalax_galili
ENSSDUG00000003299	prpf19	100	98.416	ENSNBRG00000000055	prpf19	100	98.416	Neolamprologus_brichardi
ENSSDUG00000003299	prpf19	100	85.545	ENSNLEG00000013618	PRPF19	100	85.545	Nomascus_leucogenys
ENSSDUG00000003299	prpf19	99	83.333	ENSOPRG00000008630	PRPF19	100	83.333	Ochotona_princeps
ENSSDUG00000003299	prpf19	100	85.941	ENSODEG00000004043	PRPF19	100	85.941	Octodon_degus
ENSSDUG00000003299	prpf19	100	98.416	ENSONIG00000004880	prpf19	100	98.416	Oreochromis_niloticus
ENSSDUG00000003299	prpf19	100	82.129	ENSOCUG00000015689	PRPF19	100	82.129	Oryctolagus_cuniculus
ENSSDUG00000003299	prpf19	100	97.228	ENSORLG00000004666	prpf19	100	97.228	Oryzias_latipes
ENSSDUG00000003299	prpf19	100	97.228	ENSORLG00020013561	prpf19	100	97.228	Oryzias_latipes_hni
ENSSDUG00000003299	prpf19	100	97.228	ENSORLG00015022196	prpf19	100	97.228	Oryzias_latipes_hsok
ENSSDUG00000003299	prpf19	100	96.634	ENSOMEG00000004424	prpf19	100	96.634	Oryzias_melastigma
ENSSDUG00000003299	prpf19	100	85.347	ENSOGAG00000016756	PRPF19	100	85.347	Otolemur_garnettii
ENSSDUG00000003299	prpf19	100	85.545	ENSOARG00000015596	PRPF19	100	85.545	Ovis_aries
ENSSDUG00000003299	prpf19	99	84.086	ENSPPAG00000030246	PRPF19	100	84.086	Pan_paniscus
ENSSDUG00000003299	prpf19	100	85.545	ENSPPRG00000002470	PRPF19	100	85.545	Panthera_pardus
ENSSDUG00000003299	prpf19	99	85.743	ENSPTIG00000006541	PRPF19	99	85.743	Panthera_tigris_altaica
ENSSDUG00000003299	prpf19	100	85.545	ENSPTRG00000003724	PRPF19	100	85.545	Pan_troglodytes
ENSSDUG00000003299	prpf19	100	85.545	ENSPANG00000002762	PRPF19	100	85.545	Papio_anubis
ENSSDUG00000003299	prpf19	100	94.059	ENSPKIG00000019715	prpf19	100	94.059	Paramormyrops_kingsleyae
ENSSDUG00000003299	prpf19	83	84.524	ENSPSIG00000007497	PRPF19	100	84.524	Pelodiscus_sinensis
ENSSDUG00000003299	prpf19	100	97.228	ENSPMGG00000017527	prpf19	100	97.228	Periophthalmus_magnuspinnatus
ENSSDUG00000003299	prpf19	56	34.118	ENSPEMG00000017285	Wdr36	51	34.118	Peromyscus_maniculatus_bairdii
ENSSDUG00000003299	prpf19	100	85.149	ENSPEMG00000019270	Prpf19	100	85.149	Peromyscus_maniculatus_bairdii
ENSSDUG00000003299	prpf19	99	85.021	ENSPCIG00000003485	PRPF19	80	85.021	Phascolarctos_cinereus
ENSSDUG00000003299	prpf19	100	96.634	ENSPFOG00000002558	prpf19	100	96.634	Poecilia_formosa
ENSSDUG00000003299	prpf19	100	96.634	ENSPLAG00000017942	prpf19	100	96.634	Poecilia_latipinna
ENSSDUG00000003299	prpf19	100	96.634	ENSPMEG00000008638	prpf19	100	96.634	Poecilia_mexicana
ENSSDUG00000003299	prpf19	100	97.045	ENSPREG00000002489	prpf19	96	97.045	Poecilia_reticulata
ENSSDUG00000003299	prpf19	100	85.954	ENSPPYG00000003202	PRPF19	91	85.954	Pongo_abelii
ENSSDUG00000003299	prpf19	100	84.950	ENSPCAG00000001930	PRPF19	100	84.950	Procavia_capensis
ENSSDUG00000003299	prpf19	100	86.469	ENSPCOG00000014017	PRPF19	100	86.469	Propithecus_coquereli
ENSSDUG00000003299	prpf19	100	85.545	ENSPVAG00000014669	PRPF19	100	85.545	Pteropus_vampyrus
ENSSDUG00000003299	prpf19	100	98.218	ENSPNYG00000000859	prpf19	100	98.218	Pundamilia_nyererei
ENSSDUG00000003299	prpf19	100	96.040	ENSPNAG00000019245	prpf19	100	96.040	Pygocentrus_nattereri
ENSSDUG00000003299	prpf19	100	85.545	ENSRNOG00000020897	Prpf19	100	85.545	Rattus_norvegicus
ENSSDUG00000003299	prpf19	100	85.545	ENSRBIG00000036672	PRPF19	100	85.545	Rhinopithecus_bieti
ENSSDUG00000003299	prpf19	72	35.294	ENSRROG00000042369	WDR36	53	35.294	Rhinopithecus_roxellana
ENSSDUG00000003299	prpf19	100	85.545	ENSRROG00000041572	PRPF19	100	85.545	Rhinopithecus_roxellana
ENSSDUG00000003299	prpf19	100	85.347	ENSSBOG00000022840	PRPF19	100	85.347	Saimiri_boliviensis_boliviensis
ENSSDUG00000003299	prpf19	100	85.545	ENSSHAG00000009462	PRPF19	100	85.545	Sarcophilus_harrisii
ENSSDUG00000003299	prpf19	100	93.663	ENSSFOG00015001236	prpf19	100	93.663	Scleropages_formosus
ENSSDUG00000003299	prpf19	100	99.010	ENSSMAG00000002273	prpf19	100	99.010	Scophthalmus_maximus
ENSSDUG00000003299	prpf19	100	100.000	ENSSLDG00000003019	prpf19	100	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000003299	prpf19	100	84.554	ENSSPUG00000019328	PRPF19	100	84.554	Sphenodon_punctatus
ENSSDUG00000003299	prpf19	100	99.604	ENSSPAG00000008546	prpf19	100	99.604	Stegastes_partitus
ENSSDUG00000003299	prpf19	100	85.347	ENSSSCG00000013107	PRPF19	100	85.347	Sus_scrofa
ENSSDUG00000003299	prpf19	100	85.149	ENSTGUG00000006319	PRPF19	100	85.149	Taeniopygia_guttata
ENSSDUG00000003299	prpf19	100	96.436	ENSTRUG00000008502	prpf19	100	96.436	Takifugu_rubripes
ENSSDUG00000003299	prpf19	66	96.096	ENSTNIG00000014219	prpf19	76	96.096	Tetraodon_nigroviridis
ENSSDUG00000003299	prpf19	100	85.149	ENSTTRG00000012476	PRPF19	100	85.149	Tursiops_truncatus
ENSSDUG00000003299	prpf19	100	85.545	ENSUAMG00000011280	PRPF19	100	85.545	Ursus_americanus
ENSSDUG00000003299	prpf19	84	84.870	ENSUMAG00000011609	PRPF19	83	84.870	Ursus_maritimus
ENSSDUG00000003299	prpf19	99	86.374	ENSVPAG00000010516	PRPF19	100	86.374	Vicugna_pacos
ENSSDUG00000003299	prpf19	72	34.118	ENSVVUG00000012684	WDR36	58	34.118	Vulpes_vulpes
ENSSDUG00000003299	prpf19	100	85.545	ENSVVUG00000005291	PRPF19	100	85.545	Vulpes_vulpes
ENSSDUG00000003299	prpf19	100	80.909	ENSXETG00000011938	prpf19	100	80.909	Xenopus_tropicalis
ENSSDUG00000003299	prpf19	100	96.634	ENSXCOG00000003141	prpf19	100	96.634	Xiphophorus_couchianus
ENSSDUG00000003299	prpf19	100	96.832	ENSXMAG00000008485	prpf19	100	96.832	Xiphophorus_maculatus