EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSDUG00000003929 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Seriola_dumerili
Status
putative
Strand
Plus strand
Length
2253 bases
Position
chrBDQW01000449.1:4484895-4487147
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSDUP00000005374RRM_1PF00076.222.2e-2312
ENSSDUP00000005374RRM_1PF00076.222.2e-2322
ENSSDUP00000005354RRM_1PF00076.226.3e-2312
ENSSDUP00000005354RRM_1PF00076.226.3e-2322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSDUT00000005476-627-ENSSDUP00000005374208 (aa)--
ENSSDUT00000005456-684-ENSSDUP00000005354227 (aa)--
Gene Model
Click here to download ENSSDUG00000003929's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000003929's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSDUG00000003929-7038.286ENSSDUG00000006103srsf5a5940.000
ENSSDUG00000003929-6744.509ENSSDUG00000005766srsf5b7639.189
ENSSDUG00000003929-9257.778ENSSDUG00000018908srsf97365.385
ENSSDUG00000003929-8379.798ENSSDUG00000011303-9975.641
ENSSDUG00000003929-8478.302ENSSDUG00000003887-9874.708
ENSSDUG00000003929-6941.420ENSSDUG00000007387srsf45041.176
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSDUG00000003929-9977.510ENSG00000136450SRSF110089.231Homo_sapiens
ENSSDUG00000003929-8379.798ENSAPOG00000002748-9972.177Acanthochromis_polyacanthus
ENSSDUG00000003929-8483.744ENSAPOG00000008542-10078.000Acanthochromis_polyacanthus
ENSSDUG00000003929-8479.500ENSAMEG00000002635SRSF110076.494Ailuropoda_melanoleuca
ENSSDUG00000003929-8379.293ENSACIG00000008091srsf1a9976.068Amphilophus_citrinellus
ENSSDUG00000003929-8379.798ENSAOCG00000010671-9975.641Amphiprion_ocellaris
ENSSDUG00000003929-8483.744ENSAOCG00000000337-10078.629Amphiprion_ocellaris
ENSSDUG00000003929-8379.798ENSAPEG00000009915-9975.641Amphiprion_percula
ENSSDUG00000003929-8483.744ENSAPEG00000023352-9878.226Amphiprion_percula
ENSSDUG00000003929-8379.798ENSATEG00000022403-9971.200Anabas_testudineus
ENSSDUG00000003929-8680.583ENSATEG00000021567-10076.327Anabas_testudineus
ENSSDUG00000003929-8484.000ENSACAG00000005542-10077.689Anolis_carolinensis
ENSSDUG00000003929-9977.510ENSANAG00000020583-9988.889Aotus_nancymaae
ENSSDUG00000003929-8561.500ENSANAG00000025417-10061.062Aotus_nancymaae
ENSSDUG00000003929-8284.925ENSAMXG00000035996srsf1a9877.823Astyanax_mexicanus
ENSSDUG00000003929-5670.513ENSAMXG00000024373-9567.317Astyanax_mexicanus
ENSSDUG00000003929-9977.510ENSBTAG00000014766SRSF110076.494Bos_taurus
ENSSDUG00000003929-8278.173ENSCJAG00000008111-8876.238Callithrix_jacchus
ENSSDUG00000003929-9977.510ENSCJAG00000041713-9988.889Callithrix_jacchus
ENSSDUG00000003929-9977.510ENSCAFG00000017430SRSF19776.707Canis_familiaris
ENSSDUG00000003929-9977.510ENSCAFG00020025632-9776.707Canis_lupus_dingo
ENSSDUG00000003929-8484.500ENSCHIG00000010787SRSF110076.494Capra_hircus
ENSSDUG00000003929-9977.510ENSTSYG00000013899-9988.889Carlito_syrichta
ENSSDUG00000003929-9977.510ENSCPOG00000032681-10076.494Cavia_porcellus
ENSSDUG00000003929-9977.510ENSCCAG00000029484-9988.889Cebus_capucinus
ENSSDUG00000003929-9977.510ENSCATG00000042294-9988.889Cercocebus_atys
ENSSDUG00000003929-9977.510ENSCLAG00000014707-10076.494Chinchilla_lanigera
ENSSDUG00000003929-9976.707ENSCSAG00000005642-9775.904Chlorocebus_sabaeus
ENSSDUG00000003929-8484.500ENSCHOG00000001899SRSF110076.494Choloepus_hoffmanni
ENSSDUG00000003929-9977.510ENSCPBG00000009851-10076.494Chrysemys_picta_bellii
ENSSDUG00000003929-9977.510ENSCANG00000029726-9988.889Colobus_angolensis_palliatus
ENSSDUG00000003929-9977.510ENSCGRG00001000670Srsf19776.707Cricetulus_griseus_chok1gshd
ENSSDUG00000003929-9977.510ENSCGRG00000005590Srsf110076.494Cricetulus_griseus_crigri
ENSSDUG00000003929-8375.472ENSCSEG00000009973-10070.611Cynoglossus_semilaevis
ENSSDUG00000003929-8381.818ENSCSEG00000014272-9975.527Cynoglossus_semilaevis
ENSSDUG00000003929-8282.653ENSCVAG00000005458-9875.620Cyprinodon_variegatus
ENSSDUG00000003929-8379.798ENSCVAG00000018617-9972.177Cyprinodon_variegatus
ENSSDUG00000003929-8285.787ENSDARG00000017843srsf1b9977.642Danio_rerio
ENSSDUG00000003929-8282.843ENSDARG00000057691srsf1a9983.246Danio_rerio
ENSSDUG00000003929-9977.510ENSDNOG00000011737-9776.707Dasypus_novemcinctus
ENSSDUG00000003929-9977.510ENSDORG00000015082Srsf110076.494Dipodomys_ordii
ENSSDUG00000003929-7883.422ENSETEG00000005349-6381.283Echinops_telfairi
ENSSDUG00000003929-9977.510ENSEASG00005002922-9776.707Equus_asinus_asinus
ENSSDUG00000003929-8484.500ENSECAG00000016654SRSF110076.494Equus_caballus
ENSSDUG00000003929-7884.492ENSEEUG00000009255-6382.353Erinaceus_europaeus
ENSSDUG00000003929-8282.234ENSELUG00000021646srsf1a9872.112Esox_lucius
ENSSDUG00000003929-9977.510ENSFCAG00000002250-9282.353Felis_catus
ENSSDUG00000003929-7991.228ENSFALG00000005062-9764.634Ficedula_albicollis
ENSSDUG00000003929-9977.510ENSFDAG00000010646-10076.494Fukomys_damarensis
ENSSDUG00000003929-8379.798ENSFHEG00000003174srsf1a9975.641Fundulus_heteroclitus
ENSSDUG00000003929-8482.090ENSGMOG00000014787-9976.087Gadus_morhua
ENSSDUG00000003929-8484.500ENSGALG00000005525SRSF110076.494Gallus_gallus
ENSSDUG00000003929-8477.500ENSGACG00000020621srsf1b10070.161Gasterosteus_aculeatus
ENSSDUG00000003929-9977.510ENSGAGG00000022965-9776.707Gopherus_agassizii
ENSSDUG00000003929-9977.510ENSGGOG00000004386SRSF19988.889Gorilla_gorilla
ENSSDUG00000003929-8379.293ENSHBUG00000016788srsf1a9775.745Haplochromis_burtoni
ENSSDUG00000003929-6982.635ENSHGLG00000000600-10076.606Heterocephalus_glaber_female
ENSSDUG00000003929-6982.635ENSHGLG00000000669-10076.606Heterocephalus_glaber_female
ENSSDUG00000003929-9977.510ENSHGLG00100016906-10076.494Heterocephalus_glaber_male
ENSSDUG00000003929-8377.387ENSHCOG00000018918srsf1a9871.713Hippocampus_comes
ENSSDUG00000003929-8485.000ENSIPUG00000008750srsf1b10077.912Ictalurus_punctatus
ENSSDUG00000003929-8382.090ENSIPUG00000017039srsf1a9976.400Ictalurus_punctatus
ENSSDUG00000003929-9977.510ENSSTOG00000000243-10076.494Ictidomys_tridecemlineatus
ENSSDUG00000003929-5680.000ENSJJAG00000014464-9579.231Jaculus_jaculus
ENSSDUG00000003929-9977.510ENSJJAG00000000102-10076.494Jaculus_jaculus
ENSSDUG00000003929-8380.303ENSKMAG00000019232srsf1a9973.387Kryptolebias_marmoratus
ENSSDUG00000003929-8479.000ENSLBEG00000015294-9874.286Labrus_bergylta
ENSSDUG00000003929-8379.798ENSLBEG00000020864-9975.641Labrus_bergylta
ENSSDUG00000003929-8282.234ENSLACG00000014160srsf1a9275.403Latimeria_chalumnae
ENSSDUG00000003929-8484.000ENSLOCG00000005994srsf1a10076.494Lepisosteus_oculatus
ENSSDUG00000003929-8484.500ENSLAFG00000025743SRSF110076.494Loxodonta_africana
ENSSDUG00000003929-9977.510ENSMFAG00000040003-9988.889Macaca_fascicularis
ENSSDUG00000003929-9975.502ENSMMUG00000003260-9580.402Macaca_mulatta
ENSSDUG00000003929-9977.510ENSMMUG00000004725SRSF19988.889Macaca_mulatta
ENSSDUG00000003929-9975.100ENSMNEG00000015983-9774.297Macaca_nemestrina
ENSSDUG00000003929-9977.510ENSMNEG00000027680-9988.889Macaca_nemestrina
ENSSDUG00000003929-8484.500ENSMLEG00000040509SRSF110076.494Mandrillus_leucophaeus
ENSSDUG00000003929-9972.691ENSMLEG00000015243-9772.199Mandrillus_leucophaeus
ENSSDUG00000003929-8481.500ENSMAMG00000019687-10075.100Mastacembelus_armatus
ENSSDUG00000003929-8379.798ENSMAMG00000018454-9972.177Mastacembelus_armatus
ENSSDUG00000003929-8488.000ENSMAMG00000019691-10080.816Mastacembelus_armatus
ENSSDUG00000003929-9977.510ENSMAUG00000021845Srsf110076.494Mesocricetus_auratus
ENSSDUG00000003929-9977.510ENSMICG00000013639-9988.889Microcebus_murinus
ENSSDUG00000003929-9977.510ENSMOCG00000001996Srsf110076.494Microtus_ochrogaster
ENSSDUG00000003929-8379.798ENSMMOG00000014354srsf1a9975.214Mola_mola
ENSSDUG00000003929-7882.888ENSMODG00000014781-6383.422Monodelphis_domestica
ENSSDUG00000003929-8379.798ENSMALG00000017129-7779.104Monopterus_albus
ENSSDUG00000003929-8672.864ENSMALG00000007763-10071.020Monopterus_albus
ENSSDUG00000003929-9977.510MGP_CAROLIEiJ_G0016943Srsf110076.494Mus_caroli
ENSSDUG00000003929-9977.510ENSMUSG00000018379Srsf110076.494Mus_musculus
ENSSDUG00000003929-9977.510MGP_PahariEiJ_G0018074Srsf110076.494Mus_pahari
ENSSDUG00000003929-9977.510MGP_SPRETEiJ_G0017790Srsf110076.494Mus_spretus
ENSSDUG00000003929-8484.500ENSMPUG00000015369SRSF110076.494Mustela_putorius_furo
ENSSDUG00000003929-8676.699ENSMLUG00000023995-10071.901Myotis_lucifugus
ENSSDUG00000003929-8484.500ENSMLUG00000011040SRSF110076.494Myotis_lucifugus
ENSSDUG00000003929-8484.500ENSNGAG00000011395Srsf110076.494Nannospalax_galili
ENSSDUG00000003929-9975.304ENSNBRG00000008041srsf1b10072.065Neolamprologus_brichardi
ENSSDUG00000003929-9977.510ENSNLEG00000008088-9988.889Nomascus_leucogenys
ENSSDUG00000003929-5681.395ENSMEUG00000002783-10082.171Notamacropus_eugenii
ENSSDUG00000003929-5580.741ENSOPRG00000001234-10074.194Ochotona_princeps
ENSSDUG00000003929-9878.455ENSODEG00000011481-10076.096Octodon_degus
ENSSDUG00000003929-8588.177ENSONIG00000004860-9979.757Oreochromis_niloticus
ENSSDUG00000003929-8378.894ENSONIG00000013160-9972.000Oreochromis_niloticus
ENSSDUG00000003929-9858.661ENSOCUG00000010894-9857.200Oryctolagus_cuniculus
ENSSDUG00000003929-8379.798ENSORLG00000004580srsf1a9972.177Oryzias_latipes
ENSSDUG00000003929-8379.798ENSORLG00020009456srsf1a9975.641Oryzias_latipes_hni
ENSSDUG00000003929-8379.798ENSORLG00015014384srsf1a9975.641Oryzias_latipes_hsok
ENSSDUG00000003929-7479.213ENSOMEG00000004106srsf1a9171.491Oryzias_melastigma
ENSSDUG00000003929-8884.762ENSOGAG00000025950-10076.494Otolemur_garnettii
ENSSDUG00000003929-8382.418ENSOARG00000008323SRSF110076.371Ovis_aries
ENSSDUG00000003929-9977.510ENSPPAG00000043403-9988.889Pan_paniscus
ENSSDUG00000003929-9977.510ENSPPRG00000004238-10076.494Panthera_pardus
ENSSDUG00000003929-9977.510ENSPTRG00000049077SRSF19988.889Pan_troglodytes
ENSSDUG00000003929-9960.944ENSPANG00000030275-9761.803Papio_anubis
ENSSDUG00000003929-9977.510ENSPANG00000022305-9988.889Papio_anubis
ENSSDUG00000003929-8282.741ENSPKIG00000007204srsf1a9980.687Paramormyrops_kingsleyae
ENSSDUG00000003929-8484.500ENSPKIG00000012857srsf1b10077.510Paramormyrops_kingsleyae
ENSSDUG00000003929-8478.500ENSPSIG00000009000-10073.307Pelodiscus_sinensis
ENSSDUG00000003929-8576.355ENSPMGG00000005467-9971.730Periophthalmus_magnuspinnatus
ENSSDUG00000003929-8379.500ENSPMGG00000013112-9974.459Periophthalmus_magnuspinnatus
ENSSDUG00000003929-9977.510ENSPEMG00000021416Srsf110076.494Peromyscus_maniculatus_bairdii
ENSSDUG00000003929-8483.000ENSPCIG00000006076-10077.291Phascolarctos_cinereus
ENSSDUG00000003929-8482.000ENSPFOG00000018325-8675.207Poecilia_formosa
ENSSDUG00000003929-8482.000ENSPLAG00000008416srsf1b9875.207Poecilia_latipinna
ENSSDUG00000003929-5577.344ENSPMEG00000020607-9978.049Poecilia_mexicana
ENSSDUG00000003929-5577.344ENSPMEG00000014312-9978.049Poecilia_mexicana
ENSSDUG00000003929-8482.000ENSPMEG00000002388-9875.207Poecilia_mexicana
ENSSDUG00000003929-8379.798ENSPREG00000009667srsf1a9972.177Poecilia_reticulata
ENSSDUG00000003929-9977.510ENSPPYG00000008240SRSF110076.494Pongo_abelii
ENSSDUG00000003929-8484.500ENSPCAG00000005199SRSF110076.494Procavia_capensis
ENSSDUG00000003929-9977.510ENSPCOG00000023654-9988.889Propithecus_coquereli
ENSSDUG00000003929-8570.854ENSPCOG00000025736-9570.408Propithecus_coquereli
ENSSDUG00000003929-6089.231ENSPVAG00000000519-7589.231Pteropus_vampyrus
ENSSDUG00000003929-8481.500ENSPNAG00000014601srsf1b10076.349Pygocentrus_nattereri
ENSSDUG00000003929-8283.756ENSPNAG00000022241srsf1a9876.016Pygocentrus_nattereri
ENSSDUG00000003929-8484.500ENSRNOG00000050323Srsf110076.494Rattus_norvegicus
ENSSDUG00000003929-9977.510ENSRBIG00000034445-9988.889Rhinopithecus_bieti
ENSSDUG00000003929-9977.510ENSRROG00000041506-9988.889Rhinopithecus_roxellana
ENSSDUG00000003929-9977.510ENSSBOG00000025377-9988.889Saimiri_boliviensis_boliviensis
ENSSDUG00000003929-8483.000ENSSHAG00000002552-10077.291Sarcophilus_harrisii
ENSSDUG00000003929-8383.417ENSSFOG00015004800srsf1a9975.600Scleropages_formosus
ENSSDUG00000003929-8479.412ENSSMAG00000009719-10073.333Scophthalmus_maximus
ENSSDUG00000003929-8379.293ENSSMAG00000007018-9971.371Scophthalmus_maximus
ENSSDUG00000003929-8379.798ENSSLDG00000010543-9972.177Seriola_lalandi_dorsalis
ENSSDUG00000003929-9476.000ENSSLDG00000016895-10078.151Seriola_lalandi_dorsalis
ENSSDUG00000003929-8475.500ENSSLDG00000016868-9869.658Seriola_lalandi_dorsalis
ENSSDUG00000003929-7884.492ENSSARG00000010949-6382.353Sorex_araneus
ENSSDUG00000003929-9977.510ENSSPUG00000000804-9680.000Sphenodon_punctatus
ENSSDUG00000003929-8380.303ENSSPAG00000022562-9973.387Stegastes_partitus
ENSSDUG00000003929-8482.297ENSSPAG00000014152-9876.378Stegastes_partitus
ENSSDUG00000003929-9977.510ENSSSCG00000017626-10076.494Sus_scrofa
ENSSDUG00000003929-5680.882ENSTGUG00000008416-10074.332Taeniopygia_guttata
ENSSDUG00000003929-8379.293ENSTRUG00000003691srsf1a9971.774Takifugu_rubripes
ENSSDUG00000003929-8378.894ENSTNIG00000016223srsf1a9971.200Tetraodon_nigroviridis
ENSSDUG00000003929-7882.888ENSTBEG00000015378-6380.749Tupaia_belangeri
ENSSDUG00000003929-5580.741ENSTTRG00000007310SRSF110074.194Tursiops_truncatus
ENSSDUG00000003929-8484.500ENSUAMG00000009858SRSF110076.494Ursus_americanus
ENSSDUG00000003929-9977.510ENSUMAG00000000455-9776.707Ursus_maritimus
ENSSDUG00000003929-8484.500ENSVPAG00000010094SRSF110076.494Vicugna_pacos
ENSSDUG00000003929-9977.510ENSVVUG00000011882-9776.707Vulpes_vulpes
ENSSDUG00000003929-8480.500ENSXETG00000008954srsf110072.659Xenopus_tropicalis
ENSSDUG00000003929-8379.798ENSXMAG00000011766srsf1a9972.177Xiphophorus_maculatus

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