EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000003980 (Gene tree)
Gene ID: 111235121
Gene Symbol: ints11
Alias: cpsf3l|ints11|zgc:110671
Full Name: integrator complex subunit 11
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 10050 bases
Position: chrBDQW01000468.1:2746775-2756824
Accession: 111235121
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000005444	Beta-Casp	PF10996.8	7.7e-26	1	1
ENSSDUP00000005419	Beta-Casp	PF10996.8	8.9e-26	1	1
ENSSDUP00000005419	Lactamase_B	PF00753.27	7.2e-11	1	1
ENSSDUP00000005444	Lactamase_B	PF00753.27	3.7e-08	1	1
ENSSDUP00000005419	RMMBL	PF07521.12	3.7e-17	1	1
ENSSDUP00000005444	RMMBL	PF07521.12	1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000005546	-	1641	-	ENSSDUP00000005444	546 (aa)	-	-
ENSSDUT00000005521	-	3508	XM_022763451	ENSSDUP00000005419	601 (aa)	XP_022619172	UPI000BBEDFE3

Gene Model

Click here to download ENSSDUG00000003980's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000003980's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000003980	ints11	82	37.475	ENSSDUG00000002828	cpsf3	69	37.475
ENSSDUG00000003980	ints11	87	36.053	ENSSDUG00000018498	CPSF3	74	36.053

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000003980	ints11	99	83.306	ENSG00000127054	INTS11	99	92.208	Homo_sapiens
ENSSDUG00000003980	ints11	100	98.003	ENSAPOG00000022656	ints11	100	98.003	Acanthochromis_polyacanthus
ENSSDUG00000003980	ints11	99	83.806	ENSAMEG00000013755	INTS11	99	83.806	Ailuropoda_melanoleuca
ENSSDUG00000003980	ints11	100	98.170	ENSACIG00000016715	ints11	100	98.170	Amphilophus_citrinellus
ENSSDUG00000003980	ints11	100	98.502	ENSAOCG00000021172	ints11	100	98.502	Amphiprion_ocellaris
ENSSDUG00000003980	ints11	100	98.502	ENSAPEG00000024732	ints11	100	98.502	Amphiprion_percula
ENSSDUG00000003980	ints11	100	98.003	ENSATEG00000024376	ints11	100	98.003	Anabas_testudineus
ENSSDUG00000003980	ints11	99	85.833	ENSAPLG00000005238	INTS11	99	85.833	Anas_platyrhynchos
ENSSDUG00000003980	ints11	99	85.260	ENSACAG00000013975	INTS11	99	85.260	Anolis_carolinensis
ENSSDUG00000003980	ints11	99	83.306	ENSANAG00000034133	INTS11	99	90.476	Aotus_nancymaae
ENSSDUG00000003980	ints11	99	96.791	ENSACLG00000018782	ints11	100	98.077	Astatotilapia_calliptera
ENSSDUG00000003980	ints11	99	94.500	ENSAMXG00000038758	ints11	100	94.500	Astyanax_mexicanus
ENSSDUG00000003980	ints11	99	82.805	ENSBTAG00000007620	INTS11	99	82.805	Bos_taurus
ENSSDUG00000003980	ints11	79	67.505	WBGene00008642	F10B5.8	78	67.505	Caenorhabditis_elegans
ENSSDUG00000003980	ints11	99	83.306	ENSCJAG00000011144	INTS11	99	91.729	Callithrix_jacchus
ENSSDUG00000003980	ints11	99	83.973	ENSCAFG00000019287	INTS11	99	83.973	Canis_familiaris
ENSSDUG00000003980	ints11	99	83.973	ENSCAFG00020011566	INTS11	99	83.973	Canis_lupus_dingo
ENSSDUG00000003980	ints11	99	82.805	ENSCHIG00000023117	INTS11	99	82.805	Capra_hircus
ENSSDUG00000003980	ints11	98	80.372	ENSTSYG00000012018	INTS11	98	91.781	Carlito_syrichta
ENSSDUG00000003980	ints11	84	79.134	ENSCAPG00000012788	INTS11	93	79.134	Cavia_aperea
ENSSDUG00000003980	ints11	99	83.920	ENSCPOG00000005152	INTS11	99	83.920	Cavia_porcellus
ENSSDUG00000003980	ints11	99	83.167	ENSCCAG00000026348	INTS11	99	90.476	Cebus_capucinus
ENSSDUG00000003980	ints11	99	83.472	ENSCATG00000005882	INTS11	99	90.476	Cercocebus_atys
ENSSDUG00000003980	ints11	99	83.752	ENSCLAG00000004586	INTS11	99	83.752	Chinchilla_lanigera
ENSSDUG00000003980	ints11	99	83.306	ENSCSAG00000000681	INTS11	99	83.306	Chlorocebus_sabaeus
ENSSDUG00000003980	ints11	87	94.286	ENSCPBG00000022634	INTS11	99	94.286	Chrysemys_picta_bellii
ENSSDUG00000003980	ints11	99	68.106	ENSCING00000002398	-	99	68.106	Ciona_intestinalis
ENSSDUG00000003980	ints11	99	68.729	ENSCSAVG00000007312	-	99	68.729	Ciona_savignyi
ENSSDUG00000003980	ints11	99	83.472	ENSCANG00000034418	INTS11	99	91.083	Colobus_angolensis_palliatus
ENSSDUG00000003980	ints11	99	83.472	ENSCGRG00001013448	Ints11	99	83.472	Cricetulus_griseus_chok1gshd
ENSSDUG00000003980	ints11	99	83.472	ENSCGRG00000006961	Ints11	99	83.472	Cricetulus_griseus_crigri
ENSSDUG00000003980	ints11	100	96.672	ENSCSEG00000017374	ints11	100	96.672	Cynoglossus_semilaevis
ENSSDUG00000003980	ints11	99	91.973	ENSCVAG00000008788	ints11	100	91.973	Cyprinodon_variegatus
ENSSDUG00000003980	ints11	99	94.147	ENSDARG00000025212	ints11	100	97.748	Danio_rerio
ENSSDUG00000003980	ints11	99	79.800	ENSDNOG00000025863	INTS11	84	91.647	Dasypus_novemcinctus
ENSSDUG00000003980	ints11	98	83.362	ENSDORG00000002045	Ints11	99	83.362	Dipodomys_ordii
ENSSDUG00000003980	ints11	99	69.360	FBgn0039691	IntS11	99	69.360	Drosophila_melanogaster
ENSSDUG00000003980	ints11	83	80.400	ENSETEG00000002094	INTS11	100	80.400	Echinops_telfairi
ENSSDUG00000003980	ints11	99	82.747	ENSEBUG00000003190	-	100	82.747	Eptatretus_burgeri
ENSSDUG00000003980	ints11	99	84.087	ENSEASG00005014989	INTS11	77	82.332	Equus_asinus_asinus
ENSSDUG00000003980	ints11	99	84.255	ENSECAG00000023292	INTS11	70	84.255	Equus_caballus
ENSSDUG00000003980	ints11	99	83.806	ENSEEUG00000000838	INTS11	99	83.806	Erinaceus_europaeus
ENSSDUG00000003980	ints11	99	94.000	ENSELUG00000004815	ints11	99	94.000	Esox_lucius
ENSSDUG00000003980	ints11	99	84.307	ENSFCAG00000007618	INTS11	99	92.857	Felis_catus
ENSSDUG00000003980	ints11	99	83.139	ENSFALG00000009231	INTS11	99	83.139	Ficedula_albicollis
ENSSDUG00000003980	ints11	99	84.087	ENSFDAG00000009131	INTS11	99	84.087	Fukomys_damarensis
ENSSDUG00000003980	ints11	99	96.990	ENSFHEG00000007863	ints11	100	96.990	Fundulus_heteroclitus
ENSSDUG00000003980	ints11	100	94.850	ENSGMOG00000006721	ints11	99	94.850	Gadus_morhua
ENSSDUG00000003980	ints11	99	85.930	ENSGALG00000001691	INTS11	99	85.930	Gallus_gallus
ENSSDUG00000003980	ints11	99	89.967	ENSGAFG00000019948	ints11	100	89.967	Gambusia_affinis
ENSSDUG00000003980	ints11	100	97.837	ENSGACG00000011260	ints11	99	97.837	Gasterosteus_aculeatus
ENSSDUG00000003980	ints11	99	86.097	ENSGAGG00000015874	INTS11	99	86.097	Gopherus_agassizii
ENSSDUG00000003980	ints11	99	83.639	ENSGGOG00000005366	INTS11	99	90.476	Gorilla_gorilla
ENSSDUG00000003980	ints11	100	98.336	ENSHBUG00000006820	ints11	100	98.336	Haplochromis_burtoni
ENSSDUG00000003980	ints11	98	83.080	ENSHGLG00000017561	INTS11	98	83.080	Heterocephalus_glaber_female
ENSSDUG00000003980	ints11	98	83.080	ENSHGLG00100014276	INTS11	98	83.080	Heterocephalus_glaber_male
ENSSDUG00000003980	ints11	99	96.833	ENSHCOG00000013135	ints11	100	96.833	Hippocampus_comes
ENSSDUG00000003980	ints11	99	92.333	ENSIPUG00000022761	cpsf3l	99	92.333	Ictalurus_punctatus
ENSSDUG00000003980	ints11	98	83.926	ENSSTOG00000020019	INTS11	98	83.926	Ictidomys_tridecemlineatus
ENSSDUG00000003980	ints11	99	80.067	ENSJJAG00000008717	Ints11	99	80.067	Jaculus_jaculus
ENSSDUG00000003980	ints11	100	97.837	ENSKMAG00000003315	ints11	100	97.837	Kryptolebias_marmoratus
ENSSDUG00000003980	ints11	98	96.259	ENSLBEG00000011392	ints11	99	96.259	Labrus_bergylta
ENSSDUG00000003980	ints11	99	72.185	ENSLACG00000018802	INTS11	99	72.185	Latimeria_chalumnae
ENSSDUG00000003980	ints11	99	84.193	ENSLOCG00000002177	ints11	99	84.193	Lepisosteus_oculatus
ENSSDUG00000003980	ints11	99	82.609	ENSLAFG00000013687	INTS11	99	82.609	Loxodonta_africana
ENSSDUG00000003980	ints11	99	83.306	ENSMFAG00000044583	INTS11	99	90.441	Macaca_fascicularis
ENSSDUG00000003980	ints11	99	82.689	ENSMMUG00000013866	INTS11	99	90.000	Macaca_mulatta
ENSSDUG00000003980	ints11	99	83.529	ENSMNEG00000030021	INTS11	99	90.476	Macaca_nemestrina
ENSSDUG00000003980	ints11	96	90.278	ENSMLEG00000044372	INTS11	99	90.441	Mandrillus_leucophaeus
ENSSDUG00000003980	ints11	100	97.671	ENSMAMG00000004522	ints11	100	97.671	Mastacembelus_armatus
ENSSDUG00000003980	ints11	100	98.170	ENSMZEG00005023352	ints11	100	98.170	Maylandia_zebra
ENSSDUG00000003980	ints11	99	86.097	ENSMGAG00000002879	INTS11	99	86.097	Meleagris_gallopavo
ENSSDUG00000003980	ints11	99	83.472	ENSMAUG00000010199	Ints11	99	83.472	Mesocricetus_auratus
ENSSDUG00000003980	ints11	99	82.972	ENSMICG00000014186	INTS11	99	91.304	Microcebus_murinus
ENSSDUG00000003980	ints11	99	83.639	ENSMOCG00000021304	Ints11	99	83.639	Microtus_ochrogaster
ENSSDUG00000003980	ints11	100	88.186	ENSMMOG00000015040	ints11	100	88.186	Mola_mola
ENSSDUG00000003980	ints11	99	85.309	ENSMODG00000006290	INTS11	99	85.309	Monodelphis_domestica
ENSSDUG00000003980	ints11	100	98.003	ENSMALG00000002210	ints11	100	98.003	Monopterus_albus
ENSSDUG00000003980	ints11	99	83.639	MGP_CAROLIEiJ_G0026910	Ints11	99	83.639	Mus_caroli
ENSSDUG00000003980	ints11	99	83.639	ENSMUSG00000029034	Ints11	99	83.639	Mus_musculus
ENSSDUG00000003980	ints11	99	83.639	MGP_PahariEiJ_G0029259	Ints11	99	83.639	Mus_pahari
ENSSDUG00000003980	ints11	99	83.639	MGP_SPRETEiJ_G0027905	Ints11	99	83.639	Mus_spretus
ENSSDUG00000003980	ints11	95	83.333	ENSMPUG00000014311	INTS11	99	83.333	Mustela_putorius_furo
ENSSDUG00000003980	ints11	99	83.639	ENSNGAG00000010139	Ints11	99	83.639	Nannospalax_galili
ENSSDUG00000003980	ints11	100	91.514	ENSNBRG00000002564	ints11	100	91.514	Neolamprologus_brichardi
ENSSDUG00000003980	ints11	81	86.299	ENSNLEG00000000053	INTS11	90	90.476	Nomascus_leucogenys
ENSSDUG00000003980	ints11	97	80.789	ENSMEUG00000011664	INTS11	99	80.789	Notamacropus_eugenii
ENSSDUG00000003980	ints11	54	93.431	ENSOPRG00000001794	-	83	93.431	Ochotona_princeps
ENSSDUG00000003980	ints11	99	83.920	ENSODEG00000009761	INTS11	99	83.920	Octodon_degus
ENSSDUG00000003980	ints11	100	98.170	ENSONIG00000016600	ints11	100	98.170	Oreochromis_niloticus
ENSSDUG00000003980	ints11	81	59.394	ENSOANG00000013023	-	99	58.871	Ornithorhynchus_anatinus
ENSSDUG00000003980	ints11	99	96.147	ENSORLG00000015957	ints11	99	96.147	Oryzias_latipes
ENSSDUG00000003980	ints11	99	96.147	ENSORLG00020008544	ints11	99	96.147	Oryzias_latipes_hni
ENSSDUG00000003980	ints11	99	96.147	ENSORLG00015003381	ints11	99	96.147	Oryzias_latipes_hsok
ENSSDUG00000003980	ints11	99	95.791	ENSOMEG00000018159	ints11	100	95.791	Oryzias_melastigma
ENSSDUG00000003980	ints11	99	82.943	ENSOGAG00000000463	INTS11	99	82.943	Otolemur_garnettii
ENSSDUG00000003980	ints11	90	86.150	ENSOARG00000004725	INTS11	97	86.150	Ovis_aries
ENSSDUG00000003980	ints11	99	83.306	ENSPPAG00000037865	INTS11	99	90.476	Pan_paniscus
ENSSDUG00000003980	ints11	99	84.307	ENSPPRG00000021402	INTS11	99	92.857	Panthera_pardus
ENSSDUG00000003980	ints11	98	84.237	ENSPTIG00000019834	INTS11	95	90.683	Panthera_tigris_altaica
ENSSDUG00000003980	ints11	99	83.306	ENSPTRG00000051102	INTS11	99	90.476	Pan_troglodytes
ENSSDUG00000003980	ints11	99	83.472	ENSPANG00000019349	INTS11	99	90.476	Papio_anubis
ENSSDUG00000003980	ints11	100	93.844	ENSPKIG00000008091	ints11	100	93.844	Paramormyrops_kingsleyae
ENSSDUG00000003980	ints11	99	85.427	ENSPSIG00000002824	INTS11	99	85.427	Pelodiscus_sinensis
ENSSDUG00000003980	ints11	97	97.069	ENSPMGG00000006430	ints11	96	97.069	Periophthalmus_magnuspinnatus
ENSSDUG00000003980	ints11	99	83.639	ENSPEMG00000018526	Ints11	99	83.639	Peromyscus_maniculatus_bairdii
ENSSDUG00000003980	ints11	79	67.516	ENSPCIG00000023187	-	99	77.941	Phascolarctos_cinereus
ENSSDUG00000003980	ints11	99	85.476	ENSPCIG00000007815	-	99	85.476	Phascolarctos_cinereus
ENSSDUG00000003980	ints11	99	96.995	ENSPFOG00000008512	ints11	100	96.995	Poecilia_formosa
ENSSDUG00000003980	ints11	99	96.990	ENSPLAG00000019195	ints11	100	96.990	Poecilia_latipinna
ENSSDUG00000003980	ints11	99	96.990	ENSPMEG00000018956	ints11	100	96.990	Poecilia_mexicana
ENSSDUG00000003980	ints11	99	96.990	ENSPREG00000021516	ints11	100	96.990	Poecilia_reticulata
ENSSDUG00000003980	ints11	98	78.778	ENSPPYG00000002013	INTS11	99	78.778	Pongo_abelii
ENSSDUG00000003980	ints11	69	91.667	ENSPCAG00000002309	INTS11	68	91.667	Procavia_capensis
ENSSDUG00000003980	ints11	99	82.972	ENSPCOG00000016861	INTS11	99	88.095	Propithecus_coquereli
ENSSDUG00000003980	ints11	99	83.306	ENSPVAG00000001017	INTS11	99	83.306	Pteropus_vampyrus
ENSSDUG00000003980	ints11	100	98.336	ENSPNYG00000021238	ints11	100	98.336	Pundamilia_nyererei
ENSSDUG00000003980	ints11	99	94.500	ENSPNAG00000022204	ints11	100	94.500	Pygocentrus_nattereri
ENSSDUG00000003980	ints11	99	83.639	ENSRNOG00000019712	Ints11	99	83.639	Rattus_norvegicus
ENSSDUG00000003980	ints11	99	83.025	ENSRBIG00000039487	INTS11	99	90.476	Rhinopithecus_bieti
ENSSDUG00000003980	ints11	57	75.073	ENSRROG00000039631	INTS11	99	75.073	Rhinopithecus_roxellana
ENSSDUG00000003980	ints11	99	83.306	ENSSBOG00000018848	INTS11	99	90.476	Saimiri_boliviensis_boliviensis
ENSSDUG00000003980	ints11	99	93.311	ENSSFOG00015020610	cpsf3l	99	93.311	Scleropages_formosus
ENSSDUG00000003980	ints11	100	97.504	ENSSMAG00000019579	ints11	100	97.504	Scophthalmus_maximus
ENSSDUG00000003980	ints11	100	99.834	ENSSLDG00000017198	ints11	100	99.834	Seriola_lalandi_dorsalis
ENSSDUG00000003980	ints11	99	85.595	ENSSPUG00000016767	INTS11	100	92.857	Sphenodon_punctatus
ENSSDUG00000003980	ints11	100	98.170	ENSSPAG00000018290	ints11	100	98.170	Stegastes_partitus
ENSSDUG00000003980	ints11	99	82.638	ENSSSCG00000003339	INTS11	99	82.638	Sus_scrofa
ENSSDUG00000003980	ints11	98	84.668	ENSTGUG00000003192	-	99	84.668	Taeniopygia_guttata
ENSSDUG00000003980	ints11	100	96.839	ENSTRUG00000005523	ints11	100	96.839	Takifugu_rubripes
ENSSDUG00000003980	ints11	100	95.341	ENSTNIG00000012415	ints11	100	95.341	Tetraodon_nigroviridis
ENSSDUG00000003980	ints11	89	82.519	ENSTBEG00000005377	INTS11	99	82.519	Tupaia_belangeri
ENSSDUG00000003980	ints11	99	71.119	ENSTTRG00000017031	INTS11	99	71.119	Tursiops_truncatus
ENSSDUG00000003980	ints11	99	83.973	ENSUAMG00000012804	INTS11	99	83.973	Ursus_americanus
ENSSDUG00000003980	ints11	98	83.898	ENSUMAG00000002070	INTS11	98	83.898	Ursus_maritimus
ENSSDUG00000003980	ints11	59	78.205	ENSVPAG00000005134	-	76	78.205	Vicugna_pacos
ENSSDUG00000003980	ints11	99	84.140	ENSVVUG00000004350	INTS11	99	84.140	Vulpes_vulpes
ENSSDUG00000003980	ints11	99	86.811	ENSXETG00000030716	INTS11	99	86.811	Xenopus_tropicalis
ENSSDUG00000003980	ints11	99	93.393	ENSXCOG00000015382	ints11	100	93.393	Xiphophorus_couchianus
ENSSDUG00000003980	ints11	99	96.990	ENSXMAG00000012456	ints11	100	96.990	Xiphophorus_maculatus