EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000004117 (Gene tree)
Gene ID: 111231552
Gene Symbol: fip1l1b
Alias: fip1l1|wu:fd36f11|zgc:103421
Full Name: factor interacting with PAPOLA and CPSF1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 12216 bases
Position: chrBDQW01000302.1:622525-634740
Accession: 111231552
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000005586	Fip1	PF05182.13	1.2e-24	1	1
ENSSDUP00000005573	Fip1	PF05182.13	1.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000005681	-	4053	XM_022758690	ENSSDUP00000005573	556 (aa)	XP_022614411	UPI000BBE7D60
ENSSDUT00000005694	-	3999	XM_022758694	ENSSDUP00000005586	538 (aa)	XP_022614415	UPI000BBEFB6B

Gene Model

Click here to download ENSSDUG00000004117's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000004117's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000004117	fip1l1b	71	98.958	ENSACIG00000001454	fip1l1b	96	98.958	Amphilophus_citrinellus
ENSSDUG00000004117	fip1l1b	100	95.863	ENSAOCG00000021043	fip1l1b	100	95.863	Amphiprion_ocellaris
ENSSDUG00000004117	fip1l1b	100	95.863	ENSAPEG00000022229	fip1l1b	100	95.863	Amphiprion_percula
ENSSDUG00000004117	fip1l1b	100	96.223	ENSATEG00000021757	fip1l1b	100	96.223	Anabas_testudineus
ENSSDUG00000004117	fip1l1b	84	57.143	ENSAPLG00000003042	-	90	57.364	Anas_platyrhynchos
ENSSDUG00000004117	fip1l1b	69	70.588	ENSACAG00000010556	-	89	57.250	Anolis_carolinensis
ENSSDUG00000004117	fip1l1b	100	95.725	ENSACLG00000010418	fip1l1b	100	95.725	Astatotilapia_calliptera
ENSSDUG00000004117	fip1l1b	100	72.566	ENSAMXG00000011126	fip1l1b	89	73.730	Astyanax_mexicanus
ENSSDUG00000004117	fip1l1b	53	44.876	ENSAMXG00000031045	fip1l1a	78	44.043	Astyanax_mexicanus
ENSSDUG00000004117	fip1l1b	83	63.319	ENSBTAG00000020653	FIP1L1	99	61.384	Bos_taurus
ENSSDUG00000004117	fip1l1b	83	60.291	ENSCHIG00000025903	-	99	58.916	Capra_hircus
ENSSDUG00000004117	fip1l1b	83	55.142	ENSCAPG00000009569	-	69	65.455	Cavia_aperea
ENSSDUG00000004117	fip1l1b	83	63.020	ENSCPOG00000010770	-	85	67.033	Cavia_porcellus
ENSSDUG00000004117	fip1l1b	50	53.791	ENSCPBG00000014849	-	51	51.890	Chrysemys_picta_bellii
ENSSDUG00000004117	fip1l1b	99	61.066	ENSCPBG00000025019	-	97	59.857	Chrysemys_picta_bellii
ENSSDUG00000004117	fip1l1b	99	57.754	ENSCGRG00001018568	Fip1l1	99	59.180	Cricetulus_griseus_chok1gshd
ENSSDUG00000004117	fip1l1b	99	57.754	ENSCGRG00000000208	Fip1l1	99	59.180	Cricetulus_griseus_crigri
ENSSDUG00000004117	fip1l1b	100	91.837	ENSCSEG00000006583	fip1l1b	100	91.837	Cynoglossus_semilaevis
ENSSDUG00000004117	fip1l1b	100	89.279	ENSCVAG00000023435	fip1l1b	100	89.279	Cyprinodon_variegatus
ENSSDUG00000004117	fip1l1b	100	41.812	ENSDARG00000043328	fip1l1a	89	48.663	Danio_rerio
ENSSDUG00000004117	fip1l1b	100	70.690	ENSDARG00000070431	fip1l1b	100	70.172	Danio_rerio
ENSSDUG00000004117	fip1l1b	63	52.795	ENSETEG00000018271	-	76	65.455	Echinops_telfairi
ENSSDUG00000004117	fip1l1b	83	60.613	ENSEASG00005019566	-	99	58.759	Equus_asinus_asinus
ENSSDUG00000004117	fip1l1b	55	56.232	ENSEEUG00000004965	-	59	55.977	Erinaceus_europaeus
ENSSDUG00000004117	fip1l1b	99	53.488	ENSELUG00000004607	fip1l1a	99	57.221	Esox_lucius
ENSSDUG00000004117	fip1l1b	68	77.727	ENSELUG00000001280	fip1l1b	78	77.626	Esox_lucius
ENSSDUG00000004117	fip1l1b	100	89.253	ENSFHEG00000003843	fip1l1b	100	89.253	Fundulus_heteroclitus
ENSSDUG00000004117	fip1l1b	100	70.486	ENSGMOG00000004913	fip1l1b	100	71.127	Gadus_morhua
ENSSDUG00000004117	fip1l1b	99	62.069	ENSGALG00000013943	-	99	60.980	Gallus_gallus
ENSSDUG00000004117	fip1l1b	100	88.608	ENSGAFG00000008253	fip1l1b	100	88.608	Gambusia_affinis
ENSSDUG00000004117	fip1l1b	100	75.960	ENSGACG00000015946	fip1l1b	100	75.418	Gasterosteus_aculeatus
ENSSDUG00000004117	fip1l1b	50	52.878	ENSGAGG00000017677	-	79	53.082	Gopherus_agassizii
ENSSDUG00000004117	fip1l1b	99	61.066	ENSGAGG00000009763	-	97	59.857	Gopherus_agassizii
ENSSDUG00000004117	fip1l1b	100	95.725	ENSHBUG00000013978	fip1l1b	100	95.725	Haplochromis_burtoni
ENSSDUG00000004117	fip1l1b	99	85.205	ENSHCOG00000015834	fip1l1b	99	85.383	Hippocampus_comes
ENSSDUG00000004117	fip1l1b	100	57.996	ENSIPUG00000022454	fip1l1b	64	67.584	Ictalurus_punctatus
ENSSDUG00000004117	fip1l1b	100	88.540	ENSKMAG00000021938	fip1l1b	100	88.540	Kryptolebias_marmoratus
ENSSDUG00000004117	fip1l1b	100	91.562	ENSLBEG00000028819	fip1l1b	100	91.562	Labrus_bergylta
ENSSDUG00000004117	fip1l1b	96	62.548	ENSLACG00000011991	fip1l1a	96	62.594	Latimeria_chalumnae
ENSSDUG00000004117	fip1l1b	99	66.492	ENSLOCG00000014127	fip1l1b	99	67.708	Lepisosteus_oculatus
ENSSDUG00000004117	fip1l1b	100	95.176	ENSMAMG00000004535	fip1l1b	100	95.176	Mastacembelus_armatus
ENSSDUG00000004117	fip1l1b	100	95.539	ENSMZEG00005023828	fip1l1b	100	95.539	Maylandia_zebra
ENSSDUG00000004117	fip1l1b	99	55.088	ENSMAUG00000010526	Fip1l1	99	56.545	Mesocricetus_auratus
ENSSDUG00000004117	fip1l1b	99	55.615	ENSMOCG00000008020	Fip1l1	99	57.219	Microtus_ochrogaster
ENSSDUG00000004117	fip1l1b	77	81.609	ENSMMOG00000008262	fip1l1b	92	96.154	Mola_mola
ENSSDUG00000004117	fip1l1b	76	53.247	ENSMODG00000020654	-	84	51.948	Monodelphis_domestica
ENSSDUG00000004117	fip1l1b	100	70.631	ENSMALG00000000838	fip1l1b	90	80.328	Monopterus_albus
ENSSDUG00000004117	fip1l1b	83	61.656	MGP_CAROLIEiJ_G0027304	Fip1l1	99	59.066	Mus_caroli
ENSSDUG00000004117	fip1l1b	83	61.656	ENSMUSG00000029227	Fip1l1	99	59.066	Mus_musculus
ENSSDUG00000004117	fip1l1b	83	61.656	MGP_PahariEiJ_G0017085	Fip1l1	99	59.066	Mus_pahari
ENSSDUG00000004117	fip1l1b	83	61.656	MGP_SPRETEiJ_G0028299	Fip1l1	99	59.066	Mus_spretus
ENSSDUG00000004117	fip1l1b	83	62.801	ENSNGAG00000008849	Fip1l1	99	59.392	Nannospalax_galili
ENSSDUG00000004117	fip1l1b	100	95.863	ENSNBRG00000017832	fip1l1b	100	95.863	Neolamprologus_brichardi
ENSSDUG00000004117	fip1l1b	100	95.144	ENSONIG00000008785	fip1l1b	100	95.144	Oreochromis_niloticus
ENSSDUG00000004117	fip1l1b	84	51.233	ENSOANG00000003384	-	65	53.806	Ornithorhynchus_anatinus
ENSSDUG00000004117	fip1l1b	100	89.815	ENSORLG00000004397	fip1l1b	100	89.815	Oryzias_latipes
ENSSDUG00000004117	fip1l1b	100	90.000	ENSORLG00020008716	fip1l1b	100	89.630	Oryzias_latipes_hni
ENSSDUG00000004117	fip1l1b	100	90.000	ENSORLG00015006736	fip1l1b	100	90.000	Oryzias_latipes_hsok
ENSSDUG00000004117	fip1l1b	100	61.471	ENSOMEG00000015730	fip1l1b	97	87.640	Oryzias_melastigma
ENSSDUG00000004117	fip1l1b	83	57.796	ENSOARG00000018767	-	86	62.004	Ovis_aries
ENSSDUG00000004117	fip1l1b	52	47.945	ENSPKIG00000014162	-	51	48.763	Paramormyrops_kingsleyae
ENSSDUG00000004117	fip1l1b	100	74.865	ENSPMGG00000017028	fip1l1b	100	73.759	Periophthalmus_magnuspinnatus
ENSSDUG00000004117	fip1l1b	99	57.398	ENSPEMG00000002025	Fip1l1	99	59.002	Peromyscus_maniculatus_bairdii
ENSSDUG00000004117	fip1l1b	53	56.129	ENSPCIG00000019318	-	97	56.452	Phascolarctos_cinereus
ENSSDUG00000004117	fip1l1b	100	88.566	ENSPFOG00000014745	fip1l1b	100	88.566	Poecilia_formosa
ENSSDUG00000004117	fip1l1b	100	85.688	ENSPLAG00000010954	fip1l1b	100	88.768	Poecilia_latipinna
ENSSDUG00000004117	fip1l1b	100	88.748	ENSPMEG00000019187	fip1l1b	100	88.748	Poecilia_mexicana
ENSSDUG00000004117	fip1l1b	83	71.236	ENSPREG00000012535	fip1l1b	90	71.461	Poecilia_reticulata
ENSSDUG00000004117	fip1l1b	68	95.225	ENSPNYG00000015976	fip1l1b	91	95.627	Pundamilia_nyererei
ENSSDUG00000004117	fip1l1b	62	45.345	ENSPNAG00000009853	fip1l1a	59	53.555	Pygocentrus_nattereri
ENSSDUG00000004117	fip1l1b	57	74.534	ENSPNAG00000015341	fip1l1b	71	73.538	Pygocentrus_nattereri
ENSSDUG00000004117	fip1l1b	83	59.259	ENSRNOG00000002275	Fip1l1	99	57.451	Rattus_norvegicus
ENSSDUG00000004117	fip1l1b	84	54.207	ENSSHAG00000015789	-	86	57.760	Sarcophilus_harrisii
ENSSDUG00000004117	fip1l1b	52	48.454	ENSSFOG00015010948	-	55	55.825	Scleropages_formosus
ENSSDUG00000004117	fip1l1b	100	93.896	ENSSMAG00000013444	fip1l1b	100	93.716	Scophthalmus_maximus
ENSSDUG00000004117	fip1l1b	100	99.640	ENSSLDG00000024099	fip1l1b	100	99.640	Seriola_lalandi_dorsalis
ENSSDUG00000004117	fip1l1b	87	52.062	ENSSARG00000001973	-	88	62.632	Sorex_araneus
ENSSDUG00000004117	fip1l1b	52	55.477	ENSSPUG00000017328	-	92	55.830	Sphenodon_punctatus
ENSSDUG00000004117	fip1l1b	100	97.302	ENSSPAG00000017564	fip1l1b	100	97.302	Stegastes_partitus
ENSSDUG00000004117	fip1l1b	100	88.725	ENSTRUG00000001545	fip1l1b	100	89.094	Takifugu_rubripes
ENSSDUG00000004117	fip1l1b	100	79.899	ENSTNIG00000004104	fip1l1b	100	79.730	Tetraodon_nigroviridis
ENSSDUG00000004117	fip1l1b	84	56.707	ENSUMAG00000002758	-	90	61.895	Ursus_maritimus
ENSSDUG00000004117	fip1l1b	71	55.823	ENSVPAG00000011574	-	75	62.632	Vicugna_pacos
ENSSDUG00000004117	fip1l1b	96	59.041	ENSXETG00000011679	fip1l1	92	54.821	Xenopus_tropicalis
ENSSDUG00000004117	fip1l1b	100	67.956	ENSXCOG00000013656	fip1l1b	63	83.274	Xiphophorus_couchianus
ENSSDUG00000004117	fip1l1b	100	88.566	ENSXMAG00000017620	fip1l1b	100	88.566	Xiphophorus_maculatus