EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000004241 (Gene tree)
Gene ID: 111224738
Gene Symbol: zc3hc1
Alias: zgc:154099
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 5152 bases
Position: chrBDQW01000138.1:8238829-8243980
Accession: 111224738
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000005755	zf-C3HC	PF07967.13	2.8e-35	1	1
ENSSDUP00000005755	Rsm1	PF08600.10	1.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000005868	-	2681	XM_022749357	ENSSDUP00000005755	510 (aa)	XP_022605078	UPI000BBE1DAF

Gene Model

Click here to download ENSSDUG00000004241's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000004241's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000004241	zc3hc1	93	44.016	ENSG00000091732	ZC3HC1	95	44.807	Homo_sapiens
ENSSDUG00000004241	zc3hc1	98	85.629	ENSAPOG00000009078	zc3hc1	100	85.629	Acanthochromis_polyacanthus
ENSSDUG00000004241	zc3hc1	93	44.646	ENSAMEG00000005425	ZC3HC1	95	45.436	Ailuropoda_melanoleuca
ENSSDUG00000004241	zc3hc1	98	83.897	ENSACIG00000019513	zc3hc1	100	83.897	Amphilophus_citrinellus
ENSSDUG00000004241	zc3hc1	98	84.431	ENSAOCG00000024310	zc3hc1	100	85.230	Amphiprion_ocellaris
ENSSDUG00000004241	zc3hc1	98	84.032	ENSAPEG00000004907	zc3hc1	100	84.830	Amphiprion_percula
ENSSDUG00000004241	zc3hc1	85	85.253	ENSATEG00000016898	zc3hc1	90	85.253	Anabas_testudineus
ENSSDUG00000004241	zc3hc1	85	43.274	ENSAPLG00000003832	ZC3HC1	96	44.395	Anas_platyrhynchos
ENSSDUG00000004241	zc3hc1	94	42.744	ENSACAG00000001638	ZC3HC1	95	42.744	Anolis_carolinensis
ENSSDUG00000004241	zc3hc1	93	41.948	ENSANAG00000022213	ZC3HC1	95	42.715	Aotus_nancymaae
ENSSDUG00000004241	zc3hc1	89	85.965	ENSACLG00000025033	zc3hc1	99	85.965	Astatotilapia_calliptera
ENSSDUG00000004241	zc3hc1	93	53.586	ENSAMXG00000036792	zc3hc1	97	53.586	Astyanax_mexicanus
ENSSDUG00000004241	zc3hc1	93	45.030	ENSBTAG00000011247	ZC3HC1	95	45.825	Bos_taurus
ENSSDUG00000004241	zc3hc1	93	44.064	ENSCJAG00000010536	ZC3HC1	95	44.848	Callithrix_jacchus
ENSSDUG00000004241	zc3hc1	93	45.030	ENSCAFG00000028735	-	95	45.214	Canis_familiaris
ENSSDUG00000004241	zc3hc1	93	45.030	ENSCAFG00000029401	-	93	45.214	Canis_familiaris
ENSSDUG00000004241	zc3hc1	93	45.161	ENSCAFG00000001499	-	93	45.344	Canis_familiaris
ENSSDUG00000004241	zc3hc1	93	45.436	ENSCAFG00000031850	-	95	45.621	Canis_familiaris
ENSSDUG00000004241	zc3hc1	93	45.233	ENSCAFG00020006829	-	95	45.418	Canis_lupus_dingo
ENSSDUG00000004241	zc3hc1	93	44.242	ENSCAFG00020023333	-	95	44.422	Canis_lupus_dingo
ENSSDUG00000004241	zc3hc1	93	40.081	ENSCHIG00000014103	ZC3HC1	94	40.854	Capra_hircus
ENSSDUG00000004241	zc3hc1	93	44.130	ENSTSYG00000002843	ZC3HC1	95	44.919	Carlito_syrichta
ENSSDUG00000004241	zc3hc1	84	38.341	ENSCAPG00000016300	ZC3HC1	93	39.130	Cavia_aperea
ENSSDUG00000004241	zc3hc1	94	44.088	ENSCPOG00000014034	ZC3HC1	95	46.784	Cavia_porcellus
ENSSDUG00000004241	zc3hc1	93	32.087	ENSCCAG00000020384	ZC3HC1	98	37.815	Cebus_capucinus
ENSSDUG00000004241	zc3hc1	93	43.611	ENSCATG00000023130	ZC3HC1	98	43.685	Cercocebus_atys
ENSSDUG00000004241	zc3hc1	94	31.070	ENSCLAG00000008260	ZC3HC1	87	33.654	Chinchilla_lanigera
ENSSDUG00000004241	zc3hc1	71	40.897	ENSCSAG00000009881	ZC3HC1	96	41.910	Chlorocebus_sabaeus
ENSSDUG00000004241	zc3hc1	85	47.216	ENSCHOG00000011846	ZC3HC1	95	47.204	Choloepus_hoffmanni
ENSSDUG00000004241	zc3hc1	94	45.473	ENSCPBG00000017519	ZC3HC1	96	45.272	Chrysemys_picta_bellii
ENSSDUG00000004241	zc3hc1	93	43.813	ENSCANG00000029091	ZC3HC1	95	44.603	Colobus_angolensis_palliatus
ENSSDUG00000004241	zc3hc1	93	45.010	ENSCGRG00001018805	Zc3hc1	94	47.447	Cricetulus_griseus_chok1gshd
ENSSDUG00000004241	zc3hc1	93	43.992	ENSCGRG00000017114	Zc3hc1	95	43.992	Cricetulus_griseus_crigri
ENSSDUG00000004241	zc3hc1	99	75.835	ENSCSEG00000009284	zc3hc1	99	75.835	Cynoglossus_semilaevis
ENSSDUG00000004241	zc3hc1	97	73.239	ENSCVAG00000011566	zc3hc1	99	73.239	Cyprinodon_variegatus
ENSSDUG00000004241	zc3hc1	98	62.376	ENSDARG00000062651	zc3hc1	100	62.376	Danio_rerio
ENSSDUG00000004241	zc3hc1	92	43.827	ENSDNOG00000045016	ZC3HC1	94	44.033	Dasypus_novemcinctus
ENSSDUG00000004241	zc3hc1	82	47.454	ENSDORG00000008697	Zc3hc1	87	51.429	Dipodomys_ordii
ENSSDUG00000004241	zc3hc1	85	46.889	ENSEASG00005008789	ZC3HC1	92	48.214	Equus_asinus_asinus
ENSSDUG00000004241	zc3hc1	93	44.040	ENSECAG00000017886	ZC3HC1	95	44.828	Equus_caballus
ENSSDUG00000004241	zc3hc1	75	40.000	ENSEEUG00000003123	ZC3HC1	65	50.588	Erinaceus_europaeus
ENSSDUG00000004241	zc3hc1	97	62.672	ENSELUG00000023168	zc3hc1	99	63.458	Esox_lucius
ENSSDUG00000004241	zc3hc1	93	44.625	ENSFCAG00000010429	ZC3HC1	98	44.286	Felis_catus
ENSSDUG00000004241	zc3hc1	84	41.850	ENSFALG00000005006	ZC3HC1	94	41.850	Ficedula_albicollis
ENSSDUG00000004241	zc3hc1	94	43.651	ENSFDAG00000019897	ZC3HC1	93	48.171	Fukomys_damarensis
ENSSDUG00000004241	zc3hc1	97	74.597	ENSFHEG00000020149	zc3hc1	99	74.597	Fundulus_heteroclitus
ENSSDUG00000004241	zc3hc1	97	65.726	ENSGMOG00000002914	zc3hc1	99	65.726	Gadus_morhua
ENSSDUG00000004241	zc3hc1	92	42.540	ENSGALG00000008003	ZC3HC1	95	42.540	Gallus_gallus
ENSSDUG00000004241	zc3hc1	97	76.815	ENSGAFG00000016095	zc3hc1	99	76.815	Gambusia_affinis
ENSSDUG00000004241	zc3hc1	97	80.080	ENSGACG00000019706	zc3hc1	100	80.080	Gasterosteus_aculeatus
ENSSDUG00000004241	zc3hc1	76	43.000	ENSGAGG00000016106	ZC3HC1	99	44.500	Gopherus_agassizii
ENSSDUG00000004241	zc3hc1	93	44.219	ENSGGOG00000015504	ZC3HC1	95	45.010	Gorilla_gorilla
ENSSDUG00000004241	zc3hc1	98	85.200	ENSHBUG00000008347	zc3hc1	100	85.200	Haplochromis_burtoni
ENSSDUG00000004241	zc3hc1	93	44.625	ENSHGLG00000005085	ZC3HC1	95	45.621	Heterocephalus_glaber_female
ENSSDUG00000004241	zc3hc1	93	44.715	ENSHGLG00100011395	ZC3HC1	95	45.714	Heterocephalus_glaber_male
ENSSDUG00000004241	zc3hc1	98	70.400	ENSHCOG00000014309	zc3hc1	100	70.800	Hippocampus_comes
ENSSDUG00000004241	zc3hc1	93	43.564	ENSSTOG00000023599	-	95	44.000	Ictidomys_tridecemlineatus
ENSSDUG00000004241	zc3hc1	98	78.958	ENSKMAG00000015315	zc3hc1	94	78.958	Kryptolebias_marmoratus
ENSSDUG00000004241	zc3hc1	98	78.373	ENSLBEG00000017325	zc3hc1	100	78.373	Labrus_bergylta
ENSSDUG00000004241	zc3hc1	78	44.601	ENSLACG00000013032	ZC3HC1	99	44.651	Latimeria_chalumnae
ENSSDUG00000004241	zc3hc1	97	54.403	ENSLOCG00000015963	zc3hc1	99	54.403	Lepisosteus_oculatus
ENSSDUG00000004241	zc3hc1	93	43.976	ENSLAFG00000001292	ZC3HC1	95	44.556	Loxodonta_africana
ENSSDUG00000004241	zc3hc1	93	43.813	ENSMFAG00000030176	ZC3HC1	98	43.892	Macaca_fascicularis
ENSSDUG00000004241	zc3hc1	93	42.713	ENSMMUG00000006155	ZC3HC1	98	43.892	Macaca_mulatta
ENSSDUG00000004241	zc3hc1	93	43.813	ENSMNEG00000011833	ZC3HC1	98	43.892	Macaca_nemestrina
ENSSDUG00000004241	zc3hc1	93	43.813	ENSMLEG00000027328	ZC3HC1	98	43.892	Mandrillus_leucophaeus
ENSSDUG00000004241	zc3hc1	98	86.826	ENSMAMG00000010691	zc3hc1	100	86.826	Mastacembelus_armatus
ENSSDUG00000004241	zc3hc1	98	85.000	ENSMZEG00005007142	zc3hc1	100	85.000	Maylandia_zebra
ENSSDUG00000004241	zc3hc1	92	40.719	ENSMGAG00000002977	ZC3HC1	95	40.476	Meleagris_gallopavo
ENSSDUG00000004241	zc3hc1	80	42.453	ENSMAUG00000017032	Zc3hc1	90	42.925	Mesocricetus_auratus
ENSSDUG00000004241	zc3hc1	93	43.813	ENSMICG00000009167	ZC3HC1	95	44.603	Microcebus_murinus
ENSSDUG00000004241	zc3hc1	93	45.325	ENSMOCG00000015239	Zc3hc1	94	48.204	Microtus_ochrogaster
ENSSDUG00000004241	zc3hc1	86	79.819	ENSMMOG00000002204	zc3hc1	99	79.819	Mola_mola
ENSSDUG00000004241	zc3hc1	93	34.578	ENSMODG00000014630	ZC3HC1	94	34.517	Monodelphis_domestica
ENSSDUG00000004241	zc3hc1	96	83.027	ENSMALG00000014447	zc3hc1	100	83.200	Monopterus_albus
ENSSDUG00000004241	zc3hc1	94	43.487	MGP_CAROLIEiJ_G0028183	Zc3hc1	95	46.269	Mus_caroli
ENSSDUG00000004241	zc3hc1	94	43.800	ENSMUSG00000039130	Zc3hc1	95	46.726	Mus_musculus
ENSSDUG00000004241	zc3hc1	94	40.524	MGP_PahariEiJ_G0021941	Zc3hc1	94	41.667	Mus_pahari
ENSSDUG00000004241	zc3hc1	95	43.713	MGP_SPRETEiJ_G0029183	Zc3hc1	96	46.588	Mus_spretus
ENSSDUG00000004241	zc3hc1	88	44.043	ENSMPUG00000005297	ZC3HC1	90	44.872	Mustela_putorius_furo
ENSSDUG00000004241	zc3hc1	93	44.556	ENSMLUG00000000063	-	95	44.534	Myotis_lucifugus
ENSSDUG00000004241	zc3hc1	66	40.845	ENSMLUG00000029228	-	98	40.793	Myotis_lucifugus
ENSSDUG00000004241	zc3hc1	93	44.625	ENSNGAG00000019014	Zc3hc1	95	44.807	Nannospalax_galili
ENSSDUG00000004241	zc3hc1	98	84.600	ENSNBRG00000004577	zc3hc1	100	84.600	Neolamprologus_brichardi
ENSSDUG00000004241	zc3hc1	92	44.153	ENSNLEG00000012698	ZC3HC1	94	44.939	Nomascus_leucogenys
ENSSDUG00000004241	zc3hc1	93	44.828	ENSMEUG00000011023	ZC3HC1	95	44.807	Notamacropus_eugenii
ENSSDUG00000004241	zc3hc1	55	46.957	ENSOPRG00000007867	-	60	48.696	Ochotona_princeps
ENSSDUG00000004241	zc3hc1	94	42.430	ENSODEG00000014604	ZC3HC1	96	43.400	Octodon_degus
ENSSDUG00000004241	zc3hc1	98	84.600	ENSONIG00000011644	zc3hc1	100	84.600	Oreochromis_niloticus
ENSSDUG00000004241	zc3hc1	86	40.938	ENSOANG00000011460	ZC3HC1	96	40.899	Ornithorhynchus_anatinus
ENSSDUG00000004241	zc3hc1	93	44.355	ENSOCUG00000017137	ZC3HC1	95	45.142	Oryctolagus_cuniculus
ENSSDUG00000004241	zc3hc1	96	76.876	ENSORLG00000014409	zc3hc1	99	76.541	Oryzias_latipes
ENSSDUG00000004241	zc3hc1	96	77.282	ENSORLG00020015874	zc3hc1	99	76.938	Oryzias_latipes_hni
ENSSDUG00000004241	zc3hc1	96	76.673	ENSORLG00015014641	zc3hc1	99	76.342	Oryzias_latipes_hsok
ENSSDUG00000004241	zc3hc1	97	77.328	ENSOMEG00000000215	zc3hc1	99	76.740	Oryzias_melastigma
ENSSDUG00000004241	zc3hc1	97	77.530	ENSOMEG00000020604	zc3hc1	99	76.938	Oryzias_melastigma
ENSSDUG00000004241	zc3hc1	93	38.742	ENSOGAG00000026193	ZC3HC1	95	39.919	Otolemur_garnettii
ENSSDUG00000004241	zc3hc1	93	44.355	ENSOARG00000004907	ZC3HC1	93	45.142	Ovis_aries
ENSSDUG00000004241	zc3hc1	93	44.016	ENSPPAG00000043172	ZC3HC1	95	44.807	Pan_paniscus
ENSSDUG00000004241	zc3hc1	93	44.219	ENSPPRG00000001004	ZC3HC1	98	43.878	Panthera_pardus
ENSSDUG00000004241	zc3hc1	93	44.422	ENSPTIG00000007823	ZC3HC1	98	44.082	Panthera_tigris_altaica
ENSSDUG00000004241	zc3hc1	93	43.813	ENSPTRG00000019685	ZC3HC1	95	44.603	Pan_troglodytes
ENSSDUG00000004241	zc3hc1	93	42.713	ENSPANG00000014229	ZC3HC1	98	43.892	Papio_anubis
ENSSDUG00000004241	zc3hc1	97	54.118	ENSPKIG00000007172	zc3hc1	99	54.118	Paramormyrops_kingsleyae
ENSSDUG00000004241	zc3hc1	90	42.650	ENSPSIG00000016646	ZC3HC1	90	42.181	Pelodiscus_sinensis
ENSSDUG00000004241	zc3hc1	94	68.116	ENSPMGG00000003548	zc3hc1	96	68.323	Periophthalmus_magnuspinnatus
ENSSDUG00000004241	zc3hc1	93	42.740	ENSPEMG00000000514	Zc3hc1	94	46.547	Peromyscus_maniculatus_bairdii
ENSSDUG00000004241	zc3hc1	93	42.363	ENSPCIG00000020619	ZC3HC1	99	44.000	Phascolarctos_cinereus
ENSSDUG00000004241	zc3hc1	97	76.613	ENSPFOG00000003466	zc3hc1	99	76.613	Poecilia_formosa
ENSSDUG00000004241	zc3hc1	97	76.613	ENSPLAG00000022211	zc3hc1	99	76.613	Poecilia_latipinna
ENSSDUG00000004241	zc3hc1	97	76.613	ENSPMEG00000001458	zc3hc1	99	76.613	Poecilia_mexicana
ENSSDUG00000004241	zc3hc1	97	76.815	ENSPREG00000004004	zc3hc1	99	76.815	Poecilia_reticulata
ENSSDUG00000004241	zc3hc1	93	41.212	ENSPPYG00000017998	ZC3HC1	95	41.988	Pongo_abelii
ENSSDUG00000004241	zc3hc1	85	45.434	ENSPCAG00000001182	ZC3HC1	94	46.085	Procavia_capensis
ENSSDUG00000004241	zc3hc1	93	43.813	ENSPCOG00000017354	ZC3HC1	95	43.788	Propithecus_coquereli
ENSSDUG00000004241	zc3hc1	93	41.837	ENSPVAG00000003195	ZC3HC1	95	42.245	Pteropus_vampyrus
ENSSDUG00000004241	zc3hc1	98	85.000	ENSPNYG00000020692	zc3hc1	100	85.000	Pundamilia_nyererei
ENSSDUG00000004241	zc3hc1	96	53.892	ENSPNAG00000020746	zc3hc1	100	53.892	Pygocentrus_nattereri
ENSSDUG00000004241	zc3hc1	93	43.117	ENSRNOG00000010154	Zc3hc1	95	43.089	Rattus_norvegicus
ENSSDUG00000004241	zc3hc1	85	46.325	ENSRBIG00000029409	ZC3HC1	91	52.158	Rhinopithecus_bieti
ENSSDUG00000004241	zc3hc1	93	44.219	ENSRROG00000041831	ZC3HC1	95	45.010	Rhinopithecus_roxellana
ENSSDUG00000004241	zc3hc1	75	52.991	ENSSBOG00000032787	ZC3HC1	94	52.991	Saimiri_boliviensis_boliviensis
ENSSDUG00000004241	zc3hc1	85	46.000	ENSSHAG00000002529	ZC3HC1	93	45.982	Sarcophilus_harrisii
ENSSDUG00000004241	zc3hc1	97	55.469	ENSSFOG00015003667	zc3hc1	95	55.469	Scleropages_formosus
ENSSDUG00000004241	zc3hc1	99	83.858	ENSSMAG00000000647	zc3hc1	92	85.039	Scophthalmus_maximus
ENSSDUG00000004241	zc3hc1	100	98.824	ENSSLDG00000025056	zc3hc1	100	98.824	Seriola_lalandi_dorsalis
ENSSDUG00000004241	zc3hc1	94	40.354	ENSSARG00000012013	ZC3HC1	96	40.792	Sorex_araneus
ENSSDUG00000004241	zc3hc1	80	40.515	ENSSPUG00000000778	ZC3HC1	81	40.566	Sphenodon_punctatus
ENSSDUG00000004241	zc3hc1	98	86.627	ENSSPAG00000020041	zc3hc1	100	86.627	Stegastes_partitus
ENSSDUG00000004241	zc3hc1	93	44.219	ENSSSCG00000016565	ZC3HC1	99	45.000	Sus_scrofa
ENSSDUG00000004241	zc3hc1	97	69.215	ENSTRUG00000020077	zc3hc1	99	69.215	Takifugu_rubripes
ENSSDUG00000004241	zc3hc1	97	71.000	ENSTNIG00000007585	zc3hc1	99	71.882	Tetraodon_nigroviridis
ENSSDUG00000004241	zc3hc1	94	36.948	ENSTBEG00000005216	ZC3HC1	96	37.298	Tupaia_belangeri
ENSSDUG00000004241	zc3hc1	93	44.422	ENSTTRG00000008458	ZC3HC1	99	44.399	Tursiops_truncatus
ENSSDUG00000004241	zc3hc1	93	44.828	ENSUAMG00000020249	ZC3HC1	95	45.621	Ursus_americanus
ENSSDUG00000004241	zc3hc1	93	44.625	ENSUMAG00000009268	ZC3HC1	95	45.418	Ursus_maritimus
ENSSDUG00000004241	zc3hc1	62	42.236	ENSVPAG00000010846	ZC3HC1	61	43.478	Vicugna_pacos
ENSSDUG00000004241	zc3hc1	88	45.745	ENSVVUG00000012386	ZC3HC1	94	45.940	Vulpes_vulpes
ENSSDUG00000004241	zc3hc1	89	40.381	ENSXETG00000033900	zc3hc1	95	40.381	Xenopus_tropicalis
ENSSDUG00000004241	zc3hc1	97	73.992	ENSXCOG00000013570	zc3hc1	99	73.992	Xiphophorus_couchianus
ENSSDUG00000004241	zc3hc1	89	77.704	ENSXMAG00000010979	zc3hc1	98	77.704	Xiphophorus_maculatus