EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000004302 (Gene tree)
Gene ID: 111217963
Gene Symbol: cwc25
Alias: ccdc49|fc11a02|flj20291l|im:7140273|pate|pte|wu:fc11a02|zgc:55552
Full Name: CWC25 spliceosome associated protein homolog
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 3918 bases
Position: chrBDQW01000050.1:3155815-3159732
Accession: 111217963
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000005820	CWC25	PF12542.8	3.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000005934	-	1866	XM_022740024	ENSSDUP00000005820	402 (aa)	XP_022595745	UPI000BBE67A1

Gene Model

Click here to download ENSSDUG00000004302's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000004302's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000004302	cwc25	100	89.303	ENSAPEG00000013237	cwc25	100	89.303	Amphiprion_percula
ENSSDUG00000004302	cwc25	100	87.313	ENSATEG00000000799	cwc25	100	88.308	Anabas_testudineus
ENSSDUG00000004302	cwc25	100	47.891	ENSANAG00000033550	CWC25	100	44.153	Aotus_nancymaae
ENSSDUG00000004302	cwc25	100	86.386	ENSACLG00000009352	cwc25	100	82.673	Astatotilapia_calliptera
ENSSDUG00000004302	cwc25	100	65.517	ENSAMXG00000035125	cwc25	99	65.750	Astyanax_mexicanus
ENSSDUG00000004302	cwc25	100	51.591	ENSBTAG00000030591	CWC25	86	74.648	Bos_taurus
ENSSDUG00000004302	cwc25	100	52.995	ENSCAFG00000016561	CWC25	100	51.501	Canis_familiaris
ENSSDUG00000004302	cwc25	100	51.408	ENSCAFG00020023017	CWC25	100	51.501	Canis_lupus_dingo
ENSSDUG00000004302	cwc25	100	50.797	ENSCSAG00000002654	CWC25	100	50.219	Chlorocebus_sabaeus
ENSSDUG00000004302	cwc25	100	73.956	ENSCSEG00000016305	cwc25	100	71.253	Cynoglossus_semilaevis
ENSSDUG00000004302	cwc25	100	83.333	ENSCVAG00000007828	cwc25	100	83.333	Cyprinodon_variegatus
ENSSDUG00000004302	cwc25	100	70.588	ENSDARG00000003382	cwc25	100	69.118	Danio_rerio
ENSSDUG00000004302	cwc25	100	45.763	ENSEBUG00000002947	cwc25	82	59.155	Eptatretus_burgeri
ENSSDUG00000004302	cwc25	100	68.675	ENSELUG00000009127	cwc25	100	67.952	Esox_lucius
ENSSDUG00000004302	cwc25	100	51.781	ENSFDAG00000007745	CWC25	100	52.326	Fukomys_damarensis
ENSSDUG00000004302	cwc25	100	84.577	ENSFHEG00000004754	cwc25	100	82.338	Fundulus_heteroclitus
ENSSDUG00000004302	cwc25	79	88.608	ENSGMOG00000013001	cwc25	77	87.952	Gadus_morhua
ENSSDUG00000004302	cwc25	100	51.382	ENSGALG00000001624	CWC25	100	48.998	Gallus_gallus
ENSSDUG00000004302	cwc25	100	85.075	ENSGAFG00000007492	cwc25	100	85.323	Gambusia_affinis
ENSSDUG00000004302	cwc25	100	72.642	ENSGACG00000018153	cwc25	100	79.391	Gasterosteus_aculeatus
ENSSDUG00000004302	cwc25	100	53.061	ENSGAGG00000022972	CWC25	100	51.002	Gopherus_agassizii
ENSSDUG00000004302	cwc25	100	86.139	ENSHBUG00000001392	cwc25	100	86.386	Haplochromis_burtoni
ENSSDUG00000004302	cwc25	100	81.638	ENSHCOG00000002434	cwc25	100	76.179	Hippocampus_comes
ENSSDUG00000004302	cwc25	100	64.778	ENSIPUG00000012581	CWC25	100	63.054	Ictalurus_punctatus
ENSSDUG00000004302	cwc25	100	80.597	ENSKMAG00000015418	cwc25	99	82.836	Kryptolebias_marmoratus
ENSSDUG00000004302	cwc25	84	47.953	ENSLACG00000001743	CWC25	100	46.199	Latimeria_chalumnae
ENSSDUG00000004302	cwc25	100	57.143	ENSLOCG00000013707	cwc25	100	52.403	Lepisosteus_oculatus
ENSSDUG00000004302	cwc25	60	60.331	ENSLAFG00000002238	CWC25	100	52.304	Loxodonta_africana
ENSSDUG00000004302	cwc25	100	50.000	ENSMNEG00000033729	CWC25	100	50.439	Macaca_nemestrina
ENSSDUG00000004302	cwc25	88	48.615	ENSMLEG00000033355	CWC25	97	48.635	Mandrillus_leucophaeus
ENSSDUG00000004302	cwc25	100	83.333	ENSMAMG00000005194	cwc25	100	79.602	Mastacembelus_armatus
ENSSDUG00000004302	cwc25	100	86.386	ENSMZEG00005012421	cwc25	100	82.673	Maylandia_zebra
ENSSDUG00000004302	cwc25	99	51.708	ENSMGAG00000005158	CWC25	99	48.344	Meleagris_gallopavo
ENSSDUG00000004302	cwc25	100	52.752	ENSMODG00000012627	CWC25	100	51.508	Monodelphis_domestica
ENSSDUG00000004302	cwc25	100	80.882	ENSMALG00000005638	cwc25	100	79.167	Monopterus_albus
ENSSDUG00000004302	cwc25	100	53.953	MGP_PahariEiJ_G0018193	Cwc25	69	74.648	Mus_pahari
ENSSDUG00000004302	cwc25	100	53.828	ENSNGAG00000007394	Cwc25	100	50.330	Nannospalax_galili
ENSSDUG00000004302	cwc25	99	51.276	ENSMEUG00000004156	CWC25	100	47.973	Notamacropus_eugenii
ENSSDUG00000004302	cwc25	100	53.976	ENSODEG00000017487	CWC25	100	52.326	Octodon_degus
ENSSDUG00000004302	cwc25	100	86.634	ENSONIG00000003251	cwc25	100	86.881	Oreochromis_niloticus
ENSSDUG00000004302	cwc25	100	74.378	ENSORLG00000018569	cwc25	100	69.492	Oryzias_latipes
ENSSDUG00000004302	cwc25	100	71.891	ENSORLG00020012087	cwc25	100	69.734	Oryzias_latipes_hni
ENSSDUG00000004302	cwc25	100	75.124	ENSORLG00015011062	cwc25	100	72.639	Oryzias_latipes_hsok
ENSSDUG00000004302	cwc25	100	76.119	ENSOMEG00000019365	cwc25	100	69.492	Oryzias_melastigma
ENSSDUG00000004302	cwc25	100	51.597	ENSOGAG00000008785	CWC25	100	49.644	Otolemur_garnettii
ENSSDUG00000004302	cwc25	100	50.336	ENSPANG00000022017	CWC25	100	50.439	Papio_anubis
ENSSDUG00000004302	cwc25	100	61.634	ENSPKIG00000007116	cwc25	100	60.794	Paramormyrops_kingsleyae
ENSSDUG00000004302	cwc25	100	52.982	ENSPCIG00000002943	CWC25	100	49.556	Phascolarctos_cinereus
ENSSDUG00000004302	cwc25	100	86.318	ENSPFOG00000017152	cwc25	100	86.318	Poecilia_formosa
ENSSDUG00000004302	cwc25	96	85.751	ENSPLAG00000004535	cwc25	100	85.751	Poecilia_latipinna
ENSSDUG00000004302	cwc25	100	86.070	ENSPMEG00000023752	cwc25	100	86.070	Poecilia_mexicana
ENSSDUG00000004302	cwc25	100	68.227	ENSPNAG00000028668	cwc25	100	65.301	Pygocentrus_nattereri
ENSSDUG00000004302	cwc25	100	53.953	ENSRNOG00000004091	Cwc25	100	50.336	Rattus_norvegicus
ENSSDUG00000004302	cwc25	100	52.064	ENSSHAG00000017267	CWC25	100	49.666	Sarcophilus_harrisii
ENSSDUG00000004302	cwc25	100	61.125	ENSSFOG00015003449	cwc25	100	58.554	Scleropages_formosus
ENSSDUG00000004302	cwc25	100	90.796	ENSSMAG00000010953	cwc25	100	90.796	Scophthalmus_maximus
ENSSDUG00000004302	cwc25	100	99.005	ENSSLDG00000005761	cwc25	100	99.005	Seriola_lalandi_dorsalis
ENSSDUG00000004302	cwc25	100	54.306	ENSSSCG00000021478	CWC25	100	51.152	Sus_scrofa
ENSSDUG00000004302	cwc25	100	76.866	ENSTRUG00000004650	cwc25	100	74.627	Takifugu_rubripes
ENSSDUG00000004302	cwc25	100	72.637	ENSTNIG00000014143	cwc25	100	71.642	Tetraodon_nigroviridis
ENSSDUG00000004302	cwc25	67	75.000	ENSTBEG00000013187	CWC25	65	75.000	Tupaia_belangeri
ENSSDUG00000004302	cwc25	67	75.472	ENSVPAG00000005680	CWC25	65	75.472	Vicugna_pacos
ENSSDUG00000004302	cwc25	100	52.765	ENSVVUG00000002182	CWC25	100	51.963	Vulpes_vulpes
ENSSDUG00000004302	cwc25	99	59.398	ENSXETG00000023722	cwc25	100	59.500	Xenopus_tropicalis
ENSSDUG00000004302	cwc25	100	84.080	ENSXMAG00000018113	cwc25	100	84.080	Xiphophorus_maculatus