EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000004368 (Gene tree)
Gene ID: 111225966
Gene Symbol: exd1
Alias: zgc:154068
Full Name: exonuclease 3'-5' domain containing 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 3794 bases
Position: chrBDQW01000149.1:13507991-13511784
Accession: 111225966
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000005911	DNA_pol_A_exo1	PF01612.20	6.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000006025	-	2198	XM_022751033	ENSSDUP00000005911	565 (aa)	XP_022606754	-

Gene Model

Click here to download ENSSDUG00000004368's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000004368's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000004368	exd1	63	43.501	ENSG00000178997	EXD1	66	44.000	Homo_sapiens
ENSSDUG00000004368	exd1	72	78.788	ENSAPOG00000004287	-	90	78.788	Acanthochromis_polyacanthus
ENSSDUG00000004368	exd1	64	45.692	ENSAMEG00000016793	EXD1	67	45.431	Ailuropoda_melanoleuca
ENSSDUG00000004368	exd1	80	73.529	ENSACIG00000008996	-	98	60.613	Amphilophus_citrinellus
ENSSDUG00000004368	exd1	87	73.600	ENSAOCG00000009355	-	92	73.400	Amphiprion_ocellaris
ENSSDUG00000004368	exd1	57	83.901	ENSAPEG00000002194	-	88	83.591	Amphiprion_percula
ENSSDUG00000004368	exd1	78	73.051	ENSATEG00000002623	-	99	73.051	Anabas_testudineus
ENSSDUG00000004368	exd1	63	44.180	ENSACAG00000003676	EXD1	95	43.583	Anolis_carolinensis
ENSSDUG00000004368	exd1	64	45.407	ENSANAG00000029058	EXD1	67	44.882	Aotus_nancymaae
ENSSDUG00000004368	exd1	90	65.370	ENSACLG00000001361	-	96	65.370	Astatotilapia_calliptera
ENSSDUG00000004368	exd1	93	49.623	ENSAMXG00000026016	-	91	49.808	Astyanax_mexicanus
ENSSDUG00000004368	exd1	64	44.809	ENSCJAG00000020765	EXD1	65	44.536	Callithrix_jacchus
ENSSDUG00000004368	exd1	64	43.814	ENSCAFG00000009510	EXD1	67	44.591	Canis_familiaris
ENSSDUG00000004368	exd1	64	45.455	ENSCHIG00000019606	EXD1	68	45.067	Capra_hircus
ENSSDUG00000004368	exd1	65	45.455	ENSCPOG00000010573	EXD1	67	45.455	Cavia_porcellus
ENSSDUG00000004368	exd1	64	43.501	ENSCCAG00000016905	EXD1	66	43.501	Cebus_capucinus
ENSSDUG00000004368	exd1	63	45.333	ENSCATG00000037400	EXD1	66	45.333	Cercocebus_atys
ENSSDUG00000004368	exd1	64	44.560	ENSCPBG00000013511	EXD1	62	45.170	Chrysemys_picta_bellii
ENSSDUG00000004368	exd1	63	43.902	ENSCANG00000036848	EXD1	64	43.902	Colobus_angolensis_palliatus
ENSSDUG00000004368	exd1	64	45.932	ENSCGRG00001011355	Exd1	65	45.669	Cricetulus_griseus_chok1gshd
ENSSDUG00000004368	exd1	64	45.932	ENSCGRG00000011633	Exd1	67	45.669	Cricetulus_griseus_crigri
ENSSDUG00000004368	exd1	100	60.708	ENSCSEG00000000904	-	98	60.531	Cynoglossus_semilaevis
ENSSDUG00000004368	exd1	58	51.840	ENSCVAG00000013735	-	84	63.348	Cyprinodon_variegatus
ENSSDUG00000004368	exd1	60	48.521	ENSDARG00000098669	exd1	89	52.347	Danio_rerio
ENSSDUG00000004368	exd1	64	45.288	ENSDNOG00000011410	EXD1	67	45.288	Dasypus_novemcinctus
ENSSDUG00000004368	exd1	66	45.220	ENSEASG00005016394	EXD1	69	45.478	Equus_asinus_asinus
ENSSDUG00000004368	exd1	66	45.409	ENSECAG00000021250	EXD1	69	45.202	Equus_caballus
ENSSDUG00000004368	exd1	53	40.924	ENSEEUG00000001232	EXD1	51	44.747	Erinaceus_europaeus
ENSSDUG00000004368	exd1	88	58.777	ENSELUG00000006324	-	99	55.556	Esox_lucius
ENSSDUG00000004368	exd1	66	44.162	ENSFCAG00000028533	EXD1	69	44.162	Felis_catus
ENSSDUG00000004368	exd1	55	69.453	ENSGMOG00000015956	-	94	69.775	Gadus_morhua
ENSSDUG00000004368	exd1	63	42.257	ENSGALG00000041449	EXD1	93	41.470	Gallus_gallus
ENSSDUG00000004368	exd1	99	59.574	ENSGAFG00000017161	-	98	59.929	Gambusia_affinis
ENSSDUG00000004368	exd1	68	42.683	ENSGAGG00000019200	EXD1	66	41.951	Gopherus_agassizii
ENSSDUG00000004368	exd1	63	44.533	ENSGGOG00000004594	EXD1	66	44.267	Gorilla_gorilla
ENSSDUG00000004368	exd1	69	65.649	ENSHBUG00000017880	-	97	65.649	Haplochromis_burtoni
ENSSDUG00000004368	exd1	64	42.782	ENSHGLG00000015369	EXD1	67	42.782	Heterocephalus_glaber_female
ENSSDUG00000004368	exd1	64	42.782	ENSHGLG00100007398	EXD1	68	42.782	Heterocephalus_glaber_male
ENSSDUG00000004368	exd1	64	50.541	ENSIPUG00000003370	-	99	50.674	Ictalurus_punctatus
ENSSDUG00000004368	exd1	67	46.115	ENSSTOG00000014980	EXD1	70	45.865	Ictidomys_tridecemlineatus
ENSSDUG00000004368	exd1	100	69.190	ENSLBEG00000000022	-	99	69.190	Labrus_bergylta
ENSSDUG00000004368	exd1	72	45.519	ENSLACG00000006680	EXD1	71	45.283	Latimeria_chalumnae
ENSSDUG00000004368	exd1	65	52.957	ENSLOCG00000012278	-	94	52.800	Lepisosteus_oculatus
ENSSDUG00000004368	exd1	58	48.148	ENSLAFG00000014739	EXD1	67	47.578	Loxodonta_africana
ENSSDUG00000004368	exd1	63	45.067	ENSMFAG00000034670	EXD1	66	44.800	Macaca_fascicularis
ENSSDUG00000004368	exd1	63	45.067	ENSMMUG00000013991	EXD1	66	44.800	Macaca_mulatta
ENSSDUG00000004368	exd1	63	45.067	ENSMNEG00000037333	EXD1	66	44.800	Macaca_nemestrina
ENSSDUG00000004368	exd1	54	45.570	ENSMLEG00000033153	EXD1	91	45.253	Mandrillus_leucophaeus
ENSSDUG00000004368	exd1	62	61.648	ENSMAMG00000006592	exd1	73	61.648	Mastacembelus_armatus
ENSSDUG00000004368	exd1	88	66.265	ENSMZEG00005009193	-	97	66.265	Maylandia_zebra
ENSSDUG00000004368	exd1	63	38.642	ENSMGAG00000011179	EXD1	95	38.381	Meleagris_gallopavo
ENSSDUG00000004368	exd1	65	45.736	ENSMAUG00000002698	Exd1	68	45.478	Mesocricetus_auratus
ENSSDUG00000004368	exd1	64	45.953	ENSMICG00000014337	EXD1	66	45.692	Microcebus_murinus
ENSSDUG00000004368	exd1	67	44.221	ENSMOCG00000018151	Exd1	70	43.970	Microtus_ochrogaster
ENSSDUG00000004368	exd1	64	44.241	ENSMODG00000000164	EXD1	73	43.511	Monodelphis_domestica
ENSSDUG00000004368	exd1	71	67.500	ENSMALG00000015814	-	91	68.657	Monopterus_albus
ENSSDUG00000004368	exd1	67	46.500	MGP_CAROLIEiJ_G0024145	Exd1	70	46.000	Mus_caroli
ENSSDUG00000004368	exd1	67	45.500	ENSMUSG00000048647	Exd1	70	45.250	Mus_musculus
ENSSDUG00000004368	exd1	67	41.500	MGP_PahariEiJ_G0025588	Exd1	69	41.250	Mus_pahari
ENSSDUG00000004368	exd1	67	45.750	MGP_SPRETEiJ_G0025061	Exd1	70	45.500	Mus_spretus
ENSSDUG00000004368	exd1	64	45.910	ENSMPUG00000008811	EXD1	67	45.646	Mustela_putorius_furo
ENSSDUG00000004368	exd1	60	45.777	ENSMLUG00000001466	EXD1	68	45.983	Myotis_lucifugus
ENSSDUG00000004368	exd1	68	44.554	ENSNGAG00000002319	Exd1	70	44.307	Nannospalax_galili
ENSSDUG00000004368	exd1	63	42.328	ENSNLEG00000003456	EXD1	66	42.063	Nomascus_leucogenys
ENSSDUG00000004368	exd1	65	75.741	ENSONIG00000012043	-	98	75.741	Oreochromis_niloticus
ENSSDUG00000004368	exd1	55	46.084	ENSOCUG00000013817	EXD1	66	45.482	Oryctolagus_cuniculus
ENSSDUG00000004368	exd1	91	56.286	ENSORLG00000026344	-	97	55.899	Oryzias_latipes
ENSSDUG00000004368	exd1	91	57.529	ENSORLG00020005465	-	97	57.529	Oryzias_latipes_hni
ENSSDUG00000004368	exd1	91	57.060	ENSORLG00015004848	-	98	57.373	Oryzias_latipes_hsok
ENSSDUG00000004368	exd1	90	56.751	ENSOMEG00000019812	-	96	56.751	Oryzias_melastigma
ENSSDUG00000004368	exd1	64	44.330	ENSOARG00000020330	EXD1	67	44.560	Ovis_aries
ENSSDUG00000004368	exd1	63	44.267	ENSPPAG00000033760	EXD1	66	44.000	Pan_paniscus
ENSSDUG00000004368	exd1	65	44.246	ENSPPRG00000011128	EXD1	69	44.246	Panthera_pardus
ENSSDUG00000004368	exd1	65	44.246	ENSPTIG00000020026	EXD1	69	44.246	Panthera_tigris_altaica
ENSSDUG00000004368	exd1	63	44.267	ENSPTRG00000006941	EXD1	66	44.000	Pan_troglodytes
ENSSDUG00000004368	exd1	63	45.067	ENSPANG00000019000	EXD1	66	44.800	Papio_anubis
ENSSDUG00000004368	exd1	64	60.331	ENSPKIG00000000671	-	98	47.940	Paramormyrops_kingsleyae
ENSSDUG00000004368	exd1	64	43.229	ENSPSIG00000014473	EXD1	63	42.708	Pelodiscus_sinensis
ENSSDUG00000004368	exd1	99	49.381	ENSPMGG00000015466	-	98	49.381	Periophthalmus_magnuspinnatus
ENSSDUG00000004368	exd1	78	40.671	ENSPCIG00000027845	EXD1	95	39.623	Phascolarctos_cinereus
ENSSDUG00000004368	exd1	84	58.475	ENSPFOG00000013673	-	96	74.133	Poecilia_formosa
ENSSDUG00000004368	exd1	99	60.247	ENSPLAG00000014262	-	98	60.071	Poecilia_latipinna
ENSSDUG00000004368	exd1	99	60.461	ENSPMEG00000012071	-	98	60.638	Poecilia_mexicana
ENSSDUG00000004368	exd1	99	60.284	ENSPREG00000019468	-	98	60.461	Poecilia_reticulata
ENSSDUG00000004368	exd1	64	42.895	ENSPCOG00000026598	EXD1	64	46.246	Propithecus_coquereli
ENSSDUG00000004368	exd1	64	68.421	ENSPNAG00000008931	exd1	74	67.590	Pygocentrus_nattereri
ENSSDUG00000004368	exd1	67	45.500	ENSRNOG00000025360	Exd1	71	45.250	Rattus_norvegicus
ENSSDUG00000004368	exd1	54	47.059	ENSRBIG00000037257	EXD1	94	45.263	Rhinopithecus_bieti
ENSSDUG00000004368	exd1	63	45.333	ENSRROG00000034491	EXD1	66	45.067	Rhinopithecus_roxellana
ENSSDUG00000004368	exd1	65	39.276	ENSSBOG00000024842	EXD1	65	38.501	Saimiri_boliviensis_boliviensis
ENSSDUG00000004368	exd1	68	43.457	ENSSHAG00000016701	EXD1	75	42.222	Sarcophilus_harrisii
ENSSDUG00000004368	exd1	59	48.060	ENSSFOG00015016852	-	90	48.060	Scleropages_formosus
ENSSDUG00000004368	exd1	83	86.842	ENSSMAG00000005451	-	94	86.842	Scophthalmus_maximus
ENSSDUG00000004368	exd1	86	92.152	ENSSLDG00000021803	-	94	96.404	Seriola_lalandi_dorsalis
ENSSDUG00000004368	exd1	70	39.066	ENSSPUG00000001716	EXD1	68	39.066	Sphenodon_punctatus
ENSSDUG00000004368	exd1	64	45.550	ENSSSCG00000004752	EXD1	67	45.550	Sus_scrofa
ENSSDUG00000004368	exd1	67	57.218	ENSTNIG00000017431	-	96	57.218	Tetraodon_nigroviridis
ENSSDUG00000004368	exd1	64	46.316	ENSUMAG00000012170	EXD1	67	46.053	Ursus_maritimus
ENSSDUG00000004368	exd1	64	44.072	ENSVVUG00000026704	EXD1	67	44.327	Vulpes_vulpes
ENSSDUG00000004368	exd1	65	40.483	ENSXETG00000017895	exd1	95	41.398	Xenopus_tropicalis
ENSSDUG00000004368	exd1	58	71.692	ENSXCOG00000010879	-	88	70.462	Xiphophorus_couchianus
ENSSDUG00000004368	exd1	93	59.659	ENSXMAG00000014462	-	90	70.462	Xiphophorus_maculatus