EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000004410 (Gene tree)
Gene ID: 111232237
Gene Symbol: polrmt
Alias: si:dkey-21e2.1|si:dkeyp-74c5.5|wu:fb73g10
Full Name: RNA polymerase mitochondrial
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 46482 bases
Position: chrBDQW01000322.1:313434-359915
Accession: 111232237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000006036	RNA_pol	PF00940.19	1.2e-170	1	1
ENSSDUP00000006067	RNA_pol	PF00940.19	3.8e-161	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000006160	-	5567	XM_022759658	ENSSDUP00000006036	1337 (aa)	XP_022615379	UPI000BBE85F8
ENSSDUT00000006192	-	3630	-	ENSSDUP00000006067	1209 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000004410's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000004410's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000004410	polrmt	96	46.366	ENSG00000099821	POLRMT	79	66.000	Homo_sapiens
ENSSDUG00000004410	polrmt	100	82.239	ENSAPOG00000003942	polrmt	100	82.164	Acanthochromis_polyacanthus
ENSSDUG00000004410	polrmt	96	46.434	ENSAMEG00000002745	POLRMT	95	46.352	Ailuropoda_melanoleuca
ENSSDUG00000004410	polrmt	94	83.376	ENSACIG00000016078	polrmt	100	83.290	Amphilophus_citrinellus
ENSSDUG00000004410	polrmt	100	82.164	ENSAOCG00000020208	polrmt	100	82.015	Amphiprion_ocellaris
ENSSDUG00000004410	polrmt	100	82.164	ENSAPEG00000007949	polrmt	100	82.015	Amphiprion_percula
ENSSDUG00000004410	polrmt	100	80.146	ENSATEG00000024025	polrmt	100	80.269	Anabas_testudineus
ENSSDUG00000004410	polrmt	82	57.520	ENSAPLG00000003051	POLRMT	99	58.601	Anas_platyrhynchos
ENSSDUG00000004410	polrmt	96	46.256	ENSANAG00000032916	POLRMT	95	45.710	Aotus_nancymaae
ENSSDUG00000004410	polrmt	100	83.809	ENSACLG00000003766	polrmt	100	82.239	Astatotilapia_calliptera
ENSSDUG00000004410	polrmt	94	79.839	ENSAMXG00000018258	polrmt	100	78.352	Astyanax_mexicanus
ENSSDUG00000004410	polrmt	96	47.591	ENSBTAG00000015051	POLRMT	95	47.508	Bos_taurus
ENSSDUG00000004410	polrmt	96	45.681	ENSCJAG00000012913	POLRMT	95	45.712	Callithrix_jacchus
ENSSDUG00000004410	polrmt	96	47.118	ENSCAFG00000019711	POLRMT	95	47.083	Canis_familiaris
ENSSDUG00000004410	polrmt	96	47.118	ENSCAFG00020016843	POLRMT	98	47.078	Canis_lupus_dingo
ENSSDUG00000004410	polrmt	96	47.674	ENSCHIG00000013267	POLRMT	95	47.997	Capra_hircus
ENSSDUG00000004410	polrmt	78	56.744	ENSCAPG00000016900	POLRMT	93	56.744	Cavia_aperea
ENSSDUG00000004410	polrmt	96	43.693	ENSCPOG00000023061	POLRMT	95	43.650	Cavia_porcellus
ENSSDUG00000004410	polrmt	96	45.962	ENSCCAG00000025014	POLRMT	95	45.826	Cebus_capucinus
ENSSDUG00000004410	polrmt	96	45.516	ENSCATG00000040393	POLRMT	95	45.348	Cercocebus_atys
ENSSDUG00000004410	polrmt	83	47.438	ENSCLAG00000007473	POLRMT	71	50.049	Chinchilla_lanigera
ENSSDUG00000004410	polrmt	96	45.183	ENSCSAG00000012942	POLRMT	95	44.879	Chlorocebus_sabaeus
ENSSDUG00000004410	polrmt	96	56.573	ENSCPBG00000009869	POLRMT	98	59.220	Chrysemys_picta_bellii
ENSSDUG00000004410	polrmt	64	44.913	ENSCSAVG00000000440	-	99	45.916	Ciona_savignyi
ENSSDUG00000004410	polrmt	96	45.844	ENSCANG00000038011	POLRMT	95	45.592	Colobus_angolensis_palliatus
ENSSDUG00000004410	polrmt	96	55.400	ENSCGRG00001021311	Polrmt	84	56.303	Cricetulus_griseus_chok1gshd
ENSSDUG00000004410	polrmt	96	46.930	ENSCGRG00000011134	Polrmt	85	51.495	Cricetulus_griseus_crigri
ENSSDUG00000004410	polrmt	100	63.535	ENSCSEG00000002734	polrmt	100	63.032	Cynoglossus_semilaevis
ENSSDUG00000004410	polrmt	100	78.134	ENSCVAG00000005949	polrmt	98	82.514	Cyprinodon_variegatus
ENSSDUG00000004410	polrmt	100	61.280	ENSDARG00000101220	polrmt	94	70.039	Danio_rerio
ENSSDUG00000004410	polrmt	89	65.136	ENSDORG00000014125	Polrmt	91	65.136	Dipodomys_ordii
ENSSDUG00000004410	polrmt	82	42.897	FBgn0261938	mtRNApol	77	43.462	Drosophila_melanogaster
ENSSDUG00000004410	polrmt	96	44.676	ENSETEG00000003476	POLRMT	95	44.600	Echinops_telfairi
ENSSDUG00000004410	polrmt	74	52.319	ENSEBUG00000013453	-	99	52.960	Eptatretus_burgeri
ENSSDUG00000004410	polrmt	96	47.583	ENSEASG00005021493	POLRMT	95	47.579	Equus_asinus_asinus
ENSSDUG00000004410	polrmt	96	47.906	ENSECAG00000032711	POLRMT	95	47.906	Equus_caballus
ENSSDUG00000004410	polrmt	100	72.744	ENSELUG00000019319	polrmt	96	72.881	Esox_lucius
ENSSDUG00000004410	polrmt	96	47.338	ENSFCAG00000018808	POLRMT	95	47.408	Felis_catus
ENSSDUG00000004410	polrmt	86	52.647	ENSFALG00000013910	POLRMT	98	50.669	Ficedula_albicollis
ENSSDUG00000004410	polrmt	96	43.336	ENSFDAG00000020312	POLRMT	95	43.625	Fukomys_damarensis
ENSSDUG00000004410	polrmt	99	77.455	ENSFHEG00000021239	polrmt	99	79.014	Fundulus_heteroclitus
ENSSDUG00000004410	polrmt	96	67.311	ENSGMOG00000011829	polrmt	97	71.723	Gadus_morhua
ENSSDUG00000004410	polrmt	96	53.475	ENSGALG00000001377	POLRMT	96	54.184	Gallus_gallus
ENSSDUG00000004410	polrmt	100	77.147	ENSGAFG00000003953	polrmt	100	76.699	Gambusia_affinis
ENSSDUG00000004410	polrmt	96	76.303	ENSGACG00000012957	polrmt	100	78.918	Gasterosteus_aculeatus
ENSSDUG00000004410	polrmt	95	59.492	ENSGAGG00000005522	POLRMT	100	59.407	Gopherus_agassizii
ENSSDUG00000004410	polrmt	83	69.255	ENSGGOG00000023264	-	95	69.255	Gorilla_gorilla
ENSSDUG00000004410	polrmt	100	83.441	ENSHBUG00000010005	polrmt	100	81.791	Haplochromis_burtoni
ENSSDUG00000004410	polrmt	96	43.336	ENSHGLG00000019286	POLRMT	76	49.559	Heterocephalus_glaber_female
ENSSDUG00000004410	polrmt	96	44.110	ENSHGLG00100005762	POLRMT	95	44.027	Heterocephalus_glaber_male
ENSSDUG00000004410	polrmt	100	74.535	ENSHCOG00000001565	polrmt	99	79.003	Hippocampus_comes
ENSSDUG00000004410	polrmt	100	63.569	ENSIPUG00000000789	polrmt	100	65.866	Ictalurus_punctatus
ENSSDUG00000004410	polrmt	88	65.571	ENSSTOG00000003431	POLRMT	93	65.685	Ictidomys_tridecemlineatus
ENSSDUG00000004410	polrmt	76	58.889	ENSJJAG00000012916	Polrmt	83	60.159	Jaculus_jaculus
ENSSDUG00000004410	polrmt	100	73.906	ENSKMAG00000004426	polrmt	97	78.269	Kryptolebias_marmoratus
ENSSDUG00000004410	polrmt	100	81.194	ENSLBEG00000016529	polrmt	100	80.821	Labrus_bergylta
ENSSDUG00000004410	polrmt	95	62.155	ENSLACG00000011518	POLRMT	98	66.301	Latimeria_chalumnae
ENSSDUG00000004410	polrmt	100	57.715	ENSLOCG00000005222	polrmt	100	56.794	Lepisosteus_oculatus
ENSSDUG00000004410	polrmt	96	46.289	ENSLAFG00000001860	POLRMT	95	46.661	Loxodonta_africana
ENSSDUG00000004410	polrmt	96	45.659	ENSMFAG00000031466	POLRMT	95	45.492	Macaca_fascicularis
ENSSDUG00000004410	polrmt	97	45.507	ENSMNEG00000039129	POLRMT	98	45.341	Macaca_nemestrina
ENSSDUG00000004410	polrmt	83	64.972	ENSMLEG00000037404	POLRMT	94	64.972	Mandrillus_leucophaeus
ENSSDUG00000004410	polrmt	100	82.164	ENSMAMG00000019284	polrmt	95	87.949	Mastacembelus_armatus
ENSSDUG00000004410	polrmt	100	83.809	ENSMZEG00005009932	polrmt	100	82.164	Maylandia_zebra
ENSSDUG00000004410	polrmt	82	59.902	ENSMGAG00000003243	POLRMT	88	60.568	Meleagris_gallopavo
ENSSDUG00000004410	polrmt	84	61.146	ENSMAUG00000019392	Polrmt	87	62.480	Mesocricetus_auratus
ENSSDUG00000004410	polrmt	100	46.403	ENSMICG00000016701	POLRMT	100	46.361	Microcebus_murinus
ENSSDUG00000004410	polrmt	96	45.698	ENSMOCG00000008868	Polrmt	86	49.379	Microtus_ochrogaster
ENSSDUG00000004410	polrmt	98	75.325	ENSMMOG00000000705	polrmt	99	75.406	Mola_mola
ENSSDUG00000004410	polrmt	96	50.535	ENSMODG00000006478	POLRMT	96	50.868	Monodelphis_domestica
ENSSDUG00000004410	polrmt	100	77.711	ENSMALG00000021224	polrmt	100	77.636	Monopterus_albus
ENSSDUG00000004410	polrmt	93	61.587	MGP_CAROLIEiJ_G0015538	Polrmt	100	61.663	Mus_caroli
ENSSDUG00000004410	polrmt	93	61.587	ENSMUSG00000020329	Polrmt	99	61.663	Mus_musculus
ENSSDUG00000004410	polrmt	93	61.746	MGP_PahariEiJ_G0030951	Polrmt	100	61.432	Mus_pahari
ENSSDUG00000004410	polrmt	93	61.587	MGP_SPRETEiJ_G0016356	Polrmt	100	61.663	Mus_spretus
ENSSDUG00000004410	polrmt	100	45.505	ENSMPUG00000009910	POLRMT	100	45.426	Mustela_putorius_furo
ENSSDUG00000004410	polrmt	97	46.939	ENSMLUG00000009223	POLRMT	97	46.857	Myotis_lucifugus
ENSSDUG00000004410	polrmt	92	61.587	ENSNGAG00000005498	Polrmt	95	62.641	Nannospalax_galili
ENSSDUG00000004410	polrmt	99	85.403	ENSNBRG00000023530	polrmt	100	82.078	Neolamprologus_brichardi
ENSSDUG00000004410	polrmt	96	46.560	ENSNLEG00000000718	POLRMT	95	46.315	Nomascus_leucogenys
ENSSDUG00000004410	polrmt	66	55.805	ENSOPRG00000013579	POLRMT	67	56.336	Ochotona_princeps
ENSSDUG00000004410	polrmt	91	88.395	ENSONIG00000002405	polrmt	95	87.155	Oreochromis_niloticus
ENSSDUG00000004410	polrmt	100	74.981	ENSORLG00000004329	polrmt	97	74.832	Oryzias_latipes
ENSSDUG00000004410	polrmt	100	74.497	ENSORLG00020003896	polrmt	100	74.384	Oryzias_latipes_hni
ENSSDUG00000004410	polrmt	100	74.201	ENSORLG00015022238	polrmt	97	74.052	Oryzias_latipes_hsok
ENSSDUG00000004410	polrmt	100	72.177	ENSOMEG00000008292	polrmt	100	72.550	Oryzias_melastigma
ENSSDUG00000004410	polrmt	99	47.153	ENSOGAG00000007912	POLRMT	99	46.810	Otolemur_garnettii
ENSSDUG00000004410	polrmt	96	40.704	ENSOARG00000008898	POLRMT	89	43.604	Ovis_aries
ENSSDUG00000004410	polrmt	96	45.621	ENSPPAG00000030853	POLRMT	95	45.326	Pan_paniscus
ENSSDUG00000004410	polrmt	96	44.650	ENSPPAG00000043321	-	95	44.510	Pan_paniscus
ENSSDUG00000004410	polrmt	82	59.479	ENSPPRG00000001547	POLRMT	87	59.479	Panthera_pardus
ENSSDUG00000004410	polrmt	96	44.970	ENSPTRG00000039638	-	95	44.717	Pan_troglodytes
ENSSDUG00000004410	polrmt	95	46.707	ENSPTRG00000010157	POLRMT	89	46.450	Pan_troglodytes
ENSSDUG00000004410	polrmt	96	45.903	ENSPANG00000006649	POLRMT	95	45.599	Papio_anubis
ENSSDUG00000004410	polrmt	100	60.921	ENSPKIG00000024580	polrmt	100	60.950	Paramormyrops_kingsleyae
ENSSDUG00000004410	polrmt	91	75.887	ENSPMGG00000014627	polrmt	99	75.374	Periophthalmus_magnuspinnatus
ENSSDUG00000004410	polrmt	92	60.794	ENSPEMG00000011671	Polrmt	83	61.746	Peromyscus_maniculatus_bairdii
ENSSDUG00000004410	polrmt	72	56.407	ENSPMAG00000005070	-	99	56.602	Petromyzon_marinus
ENSSDUG00000004410	polrmt	96	51.676	ENSPCIG00000006103	POLRMT	97	51.528	Phascolarctos_cinereus
ENSSDUG00000004410	polrmt	100	76.326	ENSPFOG00000003911	polrmt	100	76.102	Poecilia_formosa
ENSSDUG00000004410	polrmt	90	75.089	ENSPLAG00000005743	polrmt	93	80.974	Poecilia_latipinna
ENSSDUG00000004410	polrmt	96	78.020	ENSPMEG00000008947	polrmt	98	76.993	Poecilia_mexicana
ENSSDUG00000004410	polrmt	72	72.418	ENSPMEG00000011484	polrmt	95	71.109	Poecilia_mexicana
ENSSDUG00000004410	polrmt	100	76.957	ENSPREG00000007650	polrmt	100	76.021	Poecilia_reticulata
ENSSDUG00000004410	polrmt	90	61.925	ENSPPYG00000009282	POLRMT	95	60.515	Pongo_abelii
ENSSDUG00000004410	polrmt	90	57.377	ENSPCAG00000010816	POLRMT	89	57.377	Procavia_capensis
ENSSDUG00000004410	polrmt	96	45.477	ENSPCOG00000014539	POLRMT	95	45.714	Propithecus_coquereli
ENSSDUG00000004410	polrmt	97	46.584	ENSPVAG00000008403	POLRMT	97	46.716	Pteropus_vampyrus
ENSSDUG00000004410	polrmt	100	83.625	ENSPNYG00000020790	polrmt	100	82.015	Pundamilia_nyererei
ENSSDUG00000004410	polrmt	99	65.077	ENSPNAG00000019790	polrmt	95	72.130	Pygocentrus_nattereri
ENSSDUG00000004410	polrmt	97	46.408	ENSRNOG00000024879	Polrmt	97	46.237	Rattus_norvegicus
ENSSDUG00000004410	polrmt	96	46.154	ENSRBIG00000006728	POLRMT	95	45.690	Rhinopithecus_bieti
ENSSDUG00000004410	polrmt	96	45.910	ENSRROG00000040809	POLRMT	95	45.447	Rhinopithecus_roxellana
ENSSDUG00000004410	polrmt	96	45.955	ENSSBOG00000025388	POLRMT	97	45.536	Saimiri_boliviensis_boliviensis
ENSSDUG00000004410	polrmt	65	60.345	ENSSHAG00000009387	-	100	60.688	Sarcophilus_harrisii
ENSSDUG00000004410	polrmt	96	62.948	ENSSFOG00015005074	polrmt	92	69.426	Scleropages_formosus
ENSSDUG00000004410	polrmt	100	81.675	ENSSMAG00000011851	polrmt	100	81.601	Scophthalmus_maximus
ENSSDUG00000004410	polrmt	100	98.842	ENSSLDG00000010643	polrmt	100	98.842	Seriola_lalandi_dorsalis
ENSSDUG00000004410	polrmt	99	83.427	ENSSPAG00000018740	polrmt	100	81.764	Stegastes_partitus
ENSSDUG00000004410	polrmt	96	47.797	ENSSSCG00000035693	POLRMT	95	48.037	Sus_scrofa
ENSSDUG00000004410	polrmt	78	60.489	ENSTGUG00000000621	POLRMT	100	61.320	Taeniopygia_guttata
ENSSDUG00000004410	polrmt	100	73.163	ENSTRUG00000018040	polrmt	100	76.195	Takifugu_rubripes
ENSSDUG00000004410	polrmt	81	82.939	ENSTNIG00000010642	polrmt	100	85.108	Tetraodon_nigroviridis
ENSSDUG00000004410	polrmt	67	64.789	ENSTTRG00000011329	POLRMT	65	64.789	Tursiops_truncatus
ENSSDUG00000004410	polrmt	96	46.533	ENSUAMG00000019616	POLRMT	95	46.295	Ursus_americanus
ENSSDUG00000004410	polrmt	96	45.531	ENSVVUG00000022627	POLRMT	98	45.280	Vulpes_vulpes
ENSSDUG00000004410	polrmt	98	55.827	ENSXETG00000006545	polrmt	97	56.076	Xenopus_tropicalis
ENSSDUG00000004410	polrmt	100	77.687	ENSXMAG00000012464	polrmt	100	77.537	Xiphophorus_maculatus