EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000004426 (Gene tree)
Gene ID: 111216969
Gene Symbol: sb:cb81
Alias: LOC100334443|cb81
Full Name: mRNA decay activator protein ZFP36L1-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 2036 bases
Position: chrBDQW01000036.1:2457160-2459195
Accession: 111216969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000006005	zf-CCCH	PF00642.24	1.2e-22	1	2
ENSSDUP00000006005	zf-CCCH	PF00642.24	1.2e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000006129	-	1305	XM_022738642	ENSSDUP00000006005	434 (aa)	XP_022594363	UPI000BBEB806

Gene Model

Click here to download ENSSDUG00000004426's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu04218	Cellular senescence	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000004426's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000004426	sb:cb81	61	41.667	ENSSDUG00000000788	zfp36l2	68	44.371
ENSSDUG00000004426	sb:cb81	97	36.199	ENSSDUG00000002247	zgc:162730	84	36.554

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000004426	sb:cb81	96	67.626	ENSAPOG00000011209	sb:cb81	99	68.825	Acanthochromis_polyacanthus
ENSSDUG00000004426	sb:cb81	77	39.200	ENSAPOG00000014920	zgc:162730	82	37.333	Acanthochromis_polyacanthus
ENSSDUG00000004426	sb:cb81	53	40.329	ENSACIG00000017366	zgc:162730	96	39.754	Amphilophus_citrinellus
ENSSDUG00000004426	sb:cb81	100	81.007	ENSACIG00000009027	sb:cb81	100	80.778	Amphilophus_citrinellus
ENSSDUG00000004426	sb:cb81	100	70.115	ENSAOCG00000024158	sb:cb81	100	71.034	Amphiprion_ocellaris
ENSSDUG00000004426	sb:cb81	77	39.037	ENSAOCG00000002001	zgc:162730	82	37.234	Amphiprion_ocellaris
ENSSDUG00000004426	sb:cb81	100	70.115	ENSAPEG00000022405	sb:cb81	100	71.494	Amphiprion_percula
ENSSDUG00000004426	sb:cb81	77	39.037	ENSAPEG00000015490	zgc:162730	86	37.234	Amphiprion_percula
ENSSDUG00000004426	sb:cb81	73	36.070	ENSATEG00000008781	zgc:114130	68	36.533	Anabas_testudineus
ENSSDUG00000004426	sb:cb81	100	83.066	ENSATEG00000003462	sb:cb81	100	82.838	Anabas_testudineus
ENSSDUG00000004426	sb:cb81	68	40.000	ENSATEG00000008790	zgc:162730	80	38.056	Anabas_testudineus
ENSSDUG00000004426	sb:cb81	73	34.627	ENSACLG00000022113	zgc:114130	65	38.538	Astatotilapia_calliptera
ENSSDUG00000004426	sb:cb81	100	83.562	ENSACLG00000013759	sb:cb81	100	83.066	Astatotilapia_calliptera
ENSSDUG00000004426	sb:cb81	100	53.020	ENSAMXG00000034874	sb:cb81	100	52.573	Astyanax_mexicanus
ENSSDUG00000004426	sb:cb81	89	37.949	ENSAMXG00000036093	zfp36l1a	62	43.233	Astyanax_mexicanus
ENSSDUG00000004426	sb:cb81	100	38.022	ENSAMXG00000038581	zgc:114130	95	38.293	Astyanax_mexicanus
ENSSDUG00000004426	sb:cb81	100	72.912	ENSCSEG00000014426	sb:cb81	86	73.589	Cynoglossus_semilaevis
ENSSDUG00000004426	sb:cb81	77	37.802	ENSCSEG00000018283	zgc:162730	97	35.537	Cynoglossus_semilaevis
ENSSDUG00000004426	sb:cb81	73	41.018	ENSCVAG00000008482	zfp36l1a	75	38.529	Cyprinodon_variegatus
ENSSDUG00000004426	sb:cb81	76	39.326	ENSCVAG00000018571	zgc:162730	80	39.779	Cyprinodon_variegatus
ENSSDUG00000004426	sb:cb81	100	75.114	ENSCVAG00000009207	sb:cb81	100	73.973	Cyprinodon_variegatus
ENSSDUG00000004426	sb:cb81	60	45.283	ENSDARG00000103720	zgc:162730	89	36.620	Danio_rerio
ENSSDUG00000004426	sb:cb81	100	54.005	ENSDARG00000040503	sb:cb81	100	54.233	Danio_rerio
ENSSDUG00000004426	sb:cb81	61	45.387	ENSDARG00000016154	zfp36l1a	62	41.516	Danio_rerio
ENSSDUG00000004426	sb:cb81	100	39.310	ENSDARG00000040725	zgc:114130	96	38.215	Danio_rerio
ENSSDUG00000004426	sb:cb81	100	38.753	ENSELUG00000013151	zgc:114130	97	37.445	Esox_lucius
ENSSDUG00000004426	sb:cb81	86	36.053	ENSELUG00000013158	zgc:162730	86	36.212	Esox_lucius
ENSSDUG00000004426	sb:cb81	66	44.674	ENSELUG00000021506	zfp36l1a	61	44.280	Esox_lucius
ENSSDUG00000004426	sb:cb81	100	61.312	ENSELUG00000013045	sb:cb81	100	59.909	Esox_lucius
ENSSDUG00000004426	sb:cb81	77	37.602	ENSFHEG00000013710	zgc:162730	84	38.442	Fundulus_heteroclitus
ENSSDUG00000004426	sb:cb81	100	77.955	ENSFHEG00000022187	sb:cb81	100	77.727	Fundulus_heteroclitus
ENSSDUG00000004426	sb:cb81	61	44.526	ENSFHEG00000001313	zfp36l1a	62	41.786	Fundulus_heteroclitus
ENSSDUG00000004426	sb:cb81	75	36.705	ENSGMOG00000017242	zgc:162730	100	36.522	Gadus_morhua
ENSSDUG00000004426	sb:cb81	61	55.319	ENSGMOG00000016803	sb:cb81	91	63.569	Gadus_morhua
ENSSDUG00000004426	sb:cb81	76	39.718	ENSGAFG00000009953	zgc:162730	84	39.378	Gambusia_affinis
ENSSDUG00000004426	sb:cb81	99	69.655	ENSGAFG00000015700	sb:cb81	100	69.195	Gambusia_affinis
ENSSDUG00000004426	sb:cb81	79	78.963	ENSGACG00000013400	sb:cb81	99	78.551	Gasterosteus_aculeatus
ENSSDUG00000004426	sb:cb81	68	42.271	ENSGACG00000008351	zgc:162730	100	36.812	Gasterosteus_aculeatus
ENSSDUG00000004426	sb:cb81	61	44.891	ENSGACG00000011271	zfp36l1a	66	41.463	Gasterosteus_aculeatus
ENSSDUG00000004426	sb:cb81	100	82.273	ENSHBUG00000002383	sb:cb81	100	82.727	Haplochromis_burtoni
ENSSDUG00000004426	sb:cb81	78	38.058	ENSHCOG00000015801	zgc:162730	83	34.840	Hippocampus_comes
ENSSDUG00000004426	sb:cb81	61	43.478	ENSHCOG00000013932	zfp36l1a	65	42.361	Hippocampus_comes
ENSSDUG00000004426	sb:cb81	100	47.558	ENSHCOG00000000792	sb:cb81	96	49.469	Hippocampus_comes
ENSSDUG00000004426	sb:cb81	73	37.764	ENSHCOG00000015800	zgc:114130	65	37.540	Hippocampus_comes
ENSSDUG00000004426	sb:cb81	100	49.433	ENSIPUG00000011378	sb:cb81	100	51.247	Ictalurus_punctatus
ENSSDUG00000004426	sb:cb81	60	41.636	ENSIPUG00000018248	zgc:162730	81	35.455	Ictalurus_punctatus
ENSSDUG00000004426	sb:cb81	52	45.106	ENSIPUG00000018256	zgc:114130	68	37.465	Ictalurus_punctatus
ENSSDUG00000004426	sb:cb81	100	75.799	ENSKMAG00000009884	sb:cb81	100	77.854	Kryptolebias_marmoratus
ENSSDUG00000004426	sb:cb81	100	34.934	ENSLBEG00000018387	zgc:114130	99	34.354	Labrus_bergylta
ENSSDUG00000004426	sb:cb81	97	35.541	ENSLBEG00000018380	zgc:162730	83	38.058	Labrus_bergylta
ENSSDUG00000004426	sb:cb81	100	73.409	ENSLBEG00000018376	sb:cb81	100	75.566	Labrus_bergylta
ENSSDUG00000004426	sb:cb81	100	48.636	ENSLACG00000015732	sb:cb81	100	47.955	Latimeria_chalumnae
ENSSDUG00000004426	sb:cb81	96	35.681	ENSLACG00000015980	-	92	33.673	Latimeria_chalumnae
ENSSDUG00000004426	sb:cb81	90	34.739	ENSLOCG00000014597	zgc:162730	78	38.209	Lepisosteus_oculatus
ENSSDUG00000004426	sb:cb81	100	54.977	ENSLOCG00000014587	sb:cb81	100	55.656	Lepisosteus_oculatus
ENSSDUG00000004426	sb:cb81	100	79.176	ENSMAMG00000020144	sb:cb81	90	79.909	Mastacembelus_armatus
ENSSDUG00000004426	sb:cb81	77	38.522	ENSMAMG00000007516	zgc:162730	81	37.968	Mastacembelus_armatus
ENSSDUG00000004426	sb:cb81	62	43.262	ENSMAMG00000000274	zfp36l1a	58	42.754	Mastacembelus_armatus
ENSSDUG00000004426	sb:cb81	77	40.395	ENSMZEG00005014415	zgc:162730	96	39.837	Maylandia_zebra
ENSSDUG00000004426	sb:cb81	73	34.627	ENSMZEG00005014410	zgc:114130	65	38.538	Maylandia_zebra
ENSSDUG00000004426	sb:cb81	100	82.688	ENSMZEG00005024684	sb:cb81	100	82.192	Maylandia_zebra
ENSSDUG00000004426	sb:cb81	100	82.877	ENSMZEG00005016001	-	100	82.380	Maylandia_zebra
ENSSDUG00000004426	sb:cb81	100	61.149	ENSMMOG00000010073	sb:cb81	100	61.839	Mola_mola
ENSSDUG00000004426	sb:cb81	55	39.130	ENSMMOG00000011506	zgc:162730	99	38.976	Mola_mola
ENSSDUG00000004426	sb:cb81	77	39.142	ENSMALG00000002348	zgc:162730	82	39.024	Monopterus_albus
ENSSDUG00000004426	sb:cb81	60	70.229	ENSMALG00000021140	-	96	70.611	Monopterus_albus
ENSSDUG00000004426	sb:cb81	100	78.851	ENSNBRG00000006231	sb:cb81	100	79.770	Neolamprologus_brichardi
ENSSDUG00000004426	sb:cb81	64	41.297	ENSONIG00000005003	zgc:162730	97	40.974	Oreochromis_niloticus
ENSSDUG00000004426	sb:cb81	100	81.364	ENSONIG00000001259	sb:cb81	100	82.500	Oreochromis_niloticus
ENSSDUG00000004426	sb:cb81	100	69.266	ENSORLG00000024026	sb:cb81	86	69.037	Oryzias_latipes
ENSSDUG00000004426	sb:cb81	100	66.284	ENSORLG00020021084	sb:cb81	100	68.578	Oryzias_latipes_hni
ENSSDUG00000004426	sb:cb81	100	69.037	ENSORLG00015010105	sb:cb81	100	68.578	Oryzias_latipes_hsok
ENSSDUG00000004426	sb:cb81	80	37.245	ENSOMEG00000017752	zgc:162730	84	36.104	Oryzias_melastigma
ENSSDUG00000004426	sb:cb81	100	68.276	ENSOMEG00000020565	sb:cb81	100	67.356	Oryzias_melastigma
ENSSDUG00000004426	sb:cb81	61	43.657	ENSPKIG00000007298	ZFP36L1	62	44.030	Paramormyrops_kingsleyae
ENSSDUG00000004426	sb:cb81	61	51.986	ENSPMGG00000009232	sb:cb81	80	48.375	Periophthalmus_magnuspinnatus
ENSSDUG00000004426	sb:cb81	65	45.329	ENSPMGG00000000442	zfp36l1a	70	44.086	Periophthalmus_magnuspinnatus
ENSSDUG00000004426	sb:cb81	100	68.349	ENSPFOG00000013806	sb:cb81	100	68.807	Poecilia_formosa
ENSSDUG00000004426	sb:cb81	78	39.167	ENSPFOG00000003665	zgc:162730	100	39.130	Poecilia_formosa
ENSSDUG00000004426	sb:cb81	77	38.936	ENSPLAG00000000946	zgc:162730	84	38.482	Poecilia_latipinna
ENSSDUG00000004426	sb:cb81	91	67.595	ENSPLAG00000020158	sb:cb81	96	68.041	Poecilia_latipinna
ENSSDUG00000004426	sb:cb81	77	39.496	ENSPMEG00000000341	zgc:162730	84	38.442	Poecilia_mexicana
ENSSDUG00000004426	sb:cb81	100	68.349	ENSPMEG00000022425	sb:cb81	100	68.807	Poecilia_mexicana
ENSSDUG00000004426	sb:cb81	62	44.245	ENSPMEG00000013028	zfp36l1a	62	44.280	Poecilia_mexicana
ENSSDUG00000004426	sb:cb81	77	38.292	ENSPREG00000021263	zgc:162730	84	38.542	Poecilia_reticulata
ENSSDUG00000004426	sb:cb81	61	46.296	ENSPREG00000013484	zfp36l1a	64	42.403	Poecilia_reticulata
ENSSDUG00000004426	sb:cb81	100	66.515	ENSPREG00000017495	sb:cb81	100	67.198	Poecilia_reticulata
ENSSDUG00000004426	sb:cb81	73	34.731	ENSPNYG00000015546	zgc:114130	65	38.667	Pundamilia_nyererei
ENSSDUG00000004426	sb:cb81	100	79.310	ENSPNYG00000007502	sb:cb81	100	80.230	Pundamilia_nyererei
ENSSDUG00000004426	sb:cb81	73	38.671	ENSPNAG00000023029	zgc:114130	96	35.604	Pygocentrus_nattereri
ENSSDUG00000004426	sb:cb81	100	54.358	ENSPNAG00000030063	sb:cb81	100	55.149	Pygocentrus_nattereri
ENSSDUG00000004426	sb:cb81	61	47.940	ENSPNAG00000015712	zfp36l1a	62	43.165	Pygocentrus_nattereri
ENSSDUG00000004426	sb:cb81	61	44.528	ENSPNAG00000000386	zfp36l1b	64	42.222	Pygocentrus_nattereri
ENSSDUG00000004426	sb:cb81	60	40.684	ENSPNAG00000023018	zgc:162730	84	36.257	Pygocentrus_nattereri
ENSSDUG00000004426	sb:cb81	99	48.402	ENSSFOG00015003179	sb:cb81	99	47.260	Scleropages_formosus
ENSSDUG00000004426	sb:cb81	53	78.112	ENSSMAG00000004403	sb:cb81	94	79.060	Scophthalmus_maximus
ENSSDUG00000004426	sb:cb81	60	39.175	ENSSMAG00000018612	zgc:162730	80	35.754	Scophthalmus_maximus
ENSSDUG00000004426	sb:cb81	97	35.230	ENSSLDG00000008502	zgc:162730	84	36.815	Seriola_lalandi_dorsalis
ENSSDUG00000004426	sb:cb81	100	98.618	ENSSLDG00000018035	sb:cb81	100	98.618	Seriola_lalandi_dorsalis
ENSSDUG00000004426	sb:cb81	100	72.311	ENSSPAG00000013546	sb:cb81	100	74.201	Stegastes_partitus
ENSSDUG00000004426	sb:cb81	77	39.084	ENSSPAG00000006851	zgc:162730	82	37.466	Stegastes_partitus
ENSSDUG00000004426	sb:cb81	100	67.816	ENSTRUG00000020720	sb:cb81	100	68.276	Takifugu_rubripes
ENSSDUG00000004426	sb:cb81	51	41.502	ENSTRUG00000022473	zgc:114130	62	36.964	Takifugu_rubripes
ENSSDUG00000004426	sb:cb81	63	40.132	ENSTRUG00000021229	zgc:162730	85	37.076	Takifugu_rubripes
ENSSDUG00000004426	sb:cb81	61	43.643	ENSTNIG00000000183	zgc:162730	84	39.496	Tetraodon_nigroviridis
ENSSDUG00000004426	sb:cb81	77	65.970	ENSTNIG00000019802	sb:cb81	94	68.155	Tetraodon_nigroviridis
ENSSDUG00000004426	sb:cb81	100	37.220	ENSXETG00000016987	zfp36l1	68	45.185	Xenopus_tropicalis
ENSSDUG00000004426	sb:cb81	76	40.947	ENSXCOG00000012791	zgc:162730	84	39.637	Xiphophorus_couchianus
ENSSDUG00000004426	sb:cb81	71	68.548	ENSXCOG00000010688	sb:cb81	98	68.548	Xiphophorus_couchianus
ENSSDUG00000004426	sb:cb81	73	41.615	ENSXCOG00000001799	zfp36l1a	62	44.170	Xiphophorus_couchianus
ENSSDUG00000004426	sb:cb81	100	69.266	ENSXMAG00000004681	sb:cb81	99	68.807	Xiphophorus_maculatus
ENSSDUG00000004426	sb:cb81	76	40.947	ENSXMAG00000018206	zgc:162730	84	39.637	Xiphophorus_maculatus
ENSSDUG00000004426	sb:cb81	62	46.494	ENSXMAG00000022234	zfp36l1a	62	41.901	Xiphophorus_maculatus