EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000004449 (Gene tree)
Gene ID: 111234889
Gene Symbol: zbtb48
Alias: fd07a08|wu:fd07a08|wu:fe16d08
Full Name: telomere zinc finger-associated protein-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 10047 bases
Position: chrBDQW01000468.1:3035483-3045529
Accession: 111234889
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000006019	zf-C2H2	PF00096.26	1.9e-38	1	5
ENSSDUP00000006019	zf-C2H2	PF00096.26	1.9e-38	2	5
ENSSDUP00000006019	zf-C2H2	PF00096.26	1.9e-38	3	5
ENSSDUP00000006019	zf-C2H2	PF00096.26	1.9e-38	4	5
ENSSDUP00000006019	zf-C2H2	PF00096.26	1.9e-38	5	5
ENSSDUP00000006019	zf-met	PF12874.7	6.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000006143	-	6293	XM_022763086	ENSSDUP00000006019	772 (aa)	XP_022618807	UPI000BBE4A0B

Gene Model

Click here to download ENSSDUG00000004449's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000004449's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000004449	zbtb48	57	33.651	ENSSDUG00000000946	-	95	39.175
ENSSDUG00000004449	zbtb48	56	49.630	ENSSDUG00000000838	-	62	49.630
ENSSDUG00000004449	zbtb48	55	41.463	ENSSDUG00000004835	-	90	41.463
ENSSDUG00000004449	zbtb48	75	43.210	ENSSDUG00000022419	zbtb34	81	43.210
ENSSDUG00000004449	zbtb48	81	30.263	ENSSDUG00000012745	zbtb16b	56	35.433
ENSSDUG00000004449	zbtb48	63	48.148	ENSSDUG00000012619	zbtb44	98	48.148
ENSSDUG00000004449	zbtb48	63	38.462	ENSSDUG00000000786	-	92	46.053
ENSSDUG00000004449	zbtb48	56	40.693	ENSSDUG00000008943	-	100	36.000
ENSSDUG00000004449	zbtb48	50	32.174	ENSSDUG00000000871	-	73	32.174
ENSSDUG00000004449	zbtb48	56	31.496	ENSSDUG00000022819	hic2	51	31.496
ENSSDUG00000004449	zbtb48	61	34.188	ENSSDUG00000011170	znf236	73	34.188
ENSSDUG00000004449	zbtb48	52	36.508	ENSSDUG00000005401	-	97	36.545
ENSSDUG00000004449	zbtb48	81	38.537	ENSSDUG00000022170	zbtb49	95	39.891
ENSSDUG00000004449	zbtb48	81	35.955	ENSSDUG00000009223	zbtb41	77	35.955
ENSSDUG00000004449	zbtb48	62	37.273	ENSSDUG00000007188	zbtb20	50	33.094

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000004449	zbtb48	71	91.770	ENSAPOG00000002861	zbtb48	100	79.012	Acanthochromis_polyacanthus
ENSSDUG00000004449	zbtb48	90	69.815	ENSAOCG00000008304	zbtb48	98	83.444	Amphiprion_ocellaris
ENSSDUG00000004449	zbtb48	100	80.922	ENSATEG00000024413	zbtb48	100	80.666	Anabas_testudineus
ENSSDUG00000004449	zbtb48	79	52.026	ENSCAPG00000012228	ZBTB48	90	51.520	Cavia_aperea
ENSSDUG00000004449	zbtb48	96	53.665	ENSDARG00000039263	zbtb48	97	53.222	Danio_rerio
ENSSDUG00000004449	zbtb48	83	49.775	ENSDORG00000009677	Zbtb48	90	50.528	Dipodomys_ordii
ENSSDUG00000004449	zbtb48	59	59.219	ENSFALG00000009796	ZBTB48	75	70.137	Ficedula_albicollis
ENSSDUG00000004449	zbtb48	59	74.848	ENSGALG00000000637	ZBTB48	88	66.854	Gallus_gallus
ENSSDUG00000004449	zbtb48	83	75.000	ENSGACG00000011187	zbtb48	100	73.846	Gasterosteus_aculeatus
ENSSDUG00000004449	zbtb48	97	66.445	ENSKMAG00000002963	zbtb48	99	67.377	Kryptolebias_marmoratus
ENSSDUG00000004449	zbtb48	76	82.482	ENSLBEG00000012151	zbtb48	94	82.482	Labrus_bergylta
ENSSDUG00000004449	zbtb48	87	73.582	ENSMMOG00000014996	zbtb48	99	73.543	Mola_mola
ENSSDUG00000004449	zbtb48	88	63.959	ENSORLG00000019331	zbtb48	99	64.697	Oryzias_latipes
ENSSDUG00000004449	zbtb48	61	65.336	ENSORLG00020007790	zbtb48	78	66.387	Oryzias_latipes_hni
ENSSDUG00000004449	zbtb48	87	69.007	ENSORLG00015002568	zbtb48	97	68.065	Oryzias_latipes_hsok
ENSSDUG00000004449	zbtb48	88	62.903	ENSOMEG00000017762	zbtb48	99	62.903	Oryzias_melastigma
ENSSDUG00000004449	zbtb48	84	51.459	ENSPMGG00000019913	zbtb48	98	46.920	Periophthalmus_magnuspinnatus
ENSSDUG00000004449	zbtb48	50	66.835	ENSPVAG00000013020	ZBTB48	84	66.835	Pteropus_vampyrus
ENSSDUG00000004449	zbtb48	51	99.744	ENSSLDG00000017718	zbtb48	68	99.744	Seriola_lalandi_dorsalis
ENSSDUG00000004449	zbtb48	83	67.273	ENSSPUG00000011853	ZBTB48	82	67.273	Sphenodon_punctatus
ENSSDUG00000004449	zbtb48	59	59.870	ENSTGUG00000002589	ZBTB48	82	60.938	Taeniopygia_guttata
ENSSDUG00000004449	zbtb48	95	72.888	ENSTRUG00000008615	zbtb48	100	73.161	Takifugu_rubripes
ENSSDUG00000004449	zbtb48	84	71.846	ENSTNIG00000012449	zbtb48	99	72.546	Tetraodon_nigroviridis
ENSSDUG00000004449	zbtb48	81	50.943	ENSTBEG00000014014	ZBTB48	93	50.156	Tupaia_belangeri