EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000004474 (Gene tree)
Gene ID: 111237793
Gene Symbol: ddx54
Alias: chunp6913|mgc2835
Full Name: DEAD-box helicase 54
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 9201 bases
Position: chrBDQW01001092.1:270998-280198
Accession: 111237793
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000006118	DBP10CT	PF08147.12	6.6e-16	1	1
ENSSDUP00000006118	DEAD	PF00270.29	3.1e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000006242	-	4665	XM_022767023	ENSSDUP00000006118	871 (aa)	XP_022622744	UPI000BBE8F35

Gene Model

Click here to download ENSSDUG00000004474's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000004474's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000004474	ddx54	51	32.456	ENSSDUG00000005957	ddx18	63	32.589

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000004474	ddx54	98	59.609	ENSG00000123064	DDX54	100	86.538	Homo_sapiens
ENSSDUG00000004474	ddx54	98	85.134	ENSAPOG00000008602	ddx54	98	85.134	Acanthochromis_polyacanthus
ENSSDUG00000004474	ddx54	98	60.231	ENSAMEG00000008775	DDX54	93	60.119	Ailuropoda_melanoleuca
ENSSDUG00000004474	ddx54	100	82.353	ENSACIG00000019104	ddx54	98	82.258	Amphilophus_citrinellus
ENSSDUG00000004474	ddx54	98	84.669	ENSAOCG00000008449	ddx54	98	84.785	Amphiprion_ocellaris
ENSSDUG00000004474	ddx54	98	84.669	ENSAPEG00000014287	ddx54	98	84.785	Amphiprion_percula
ENSSDUG00000004474	ddx54	100	84.932	ENSATEG00000018529	ddx54	98	84.884	Anabas_testudineus
ENSSDUG00000004474	ddx54	95	61.621	ENSAPLG00000013191	DDX54	98	61.642	Anas_platyrhynchos
ENSSDUG00000004474	ddx54	97	63.059	ENSACAG00000004703	DDX54	96	62.275	Anolis_carolinensis
ENSSDUG00000004474	ddx54	99	51.508	ENSANAG00000032761	-	94	51.282	Aotus_nancymaae
ENSSDUG00000004474	ddx54	91	52.553	ENSANAG00000032241	-	88	52.611	Aotus_nancymaae
ENSSDUG00000004474	ddx54	100	83.638	ENSACLG00000013176	ddx54	98	84.149	Astatotilapia_calliptera
ENSSDUG00000004474	ddx54	100	76.109	ENSAMXG00000009189	ddx54	98	75.898	Astyanax_mexicanus
ENSSDUG00000004474	ddx54	98	59.817	ENSBTAG00000011930	DDX54	88	60.400	Bos_taurus
ENSSDUG00000004474	ddx54	80	48.387	WBGene00022378	Y94H6A.5	87	48.214	Caenorhabditis_elegans
ENSSDUG00000004474	ddx54	85	63.373	ENSCJAG00000010039	DDX54	81	63.373	Callithrix_jacchus
ENSSDUG00000004474	ddx54	67	50.847	ENSCAFG00000009029	DDX54	97	50.526	Canis_familiaris
ENSSDUG00000004474	ddx54	100	59.594	ENSCAFG00020017643	DDX54	96	59.584	Canis_lupus_dingo
ENSSDUG00000004474	ddx54	98	59.054	ENSCHIG00000026798	DDX54	94	59.246	Capra_hircus
ENSSDUG00000004474	ddx54	95	56.958	ENSTSYG00000007898	DDX54	92	56.711	Carlito_syrichta
ENSSDUG00000004474	ddx54	95	60.595	ENSCAPG00000001482	DDX54	94	59.227	Cavia_aperea
ENSSDUG00000004474	ddx54	98	59.794	ENSCPOG00000020649	DDX54	94	59.437	Cavia_porcellus
ENSSDUG00000004474	ddx54	98	59.247	ENSCCAG00000022625	DDX54	94	59.674	Cebus_capucinus
ENSSDUG00000004474	ddx54	98	59.065	ENSCATG00000041943	DDX54	95	59.302	Cercocebus_atys
ENSSDUG00000004474	ddx54	100	58.864	ENSCLAG00000010748	DDX54	96	58.420	Chinchilla_lanigera
ENSSDUG00000004474	ddx54	95	59.102	ENSCSAG00000002432	DDX54	88	59.277	Chlorocebus_sabaeus
ENSSDUG00000004474	ddx54	77	59.496	ENSCPBG00000017982	DDX54	83	58.967	Chrysemys_picta_bellii
ENSSDUG00000004474	ddx54	89	54.151	ENSCING00000004789	-	88	55.923	Ciona_intestinalis
ENSSDUG00000004474	ddx54	88	52.448	ENSCSAVG00000008916	-	98	69.880	Ciona_savignyi
ENSSDUG00000004474	ddx54	90	85.532	ENSCANG00000020637	DDX54	97	85.532	Colobus_angolensis_palliatus
ENSSDUG00000004474	ddx54	100	59.029	ENSCGRG00001014803	Ddx54	94	59.670	Cricetulus_griseus_chok1gshd
ENSSDUG00000004474	ddx54	100	58.896	ENSCGRG00000002827	Ddx54	94	59.529	Cricetulus_griseus_crigri
ENSSDUG00000004474	ddx54	98	81.702	ENSCSEG00000016462	ddx54	98	82.051	Cynoglossus_semilaevis
ENSSDUG00000004474	ddx54	100	81.984	ENSCVAG00000022404	ddx54	98	81.765	Cyprinodon_variegatus
ENSSDUG00000004474	ddx54	100	73.295	ENSDARG00000105286	ddx54	98	73.148	Danio_rerio
ENSSDUG00000004474	ddx54	98	60.139	ENSDNOG00000032913	DDX54	95	60.141	Dasypus_novemcinctus
ENSSDUG00000004474	ddx54	82	54.028	ENSDORG00000003399	Ddx54	93	53.846	Dipodomys_ordii
ENSSDUG00000004474	ddx54	87	43.924	FBgn0052344	CG32344	88	45.878	Drosophila_melanogaster
ENSSDUG00000004474	ddx54	76	59.314	ENSEBUG00000008886	ddx54	94	59.314	Eptatretus_burgeri
ENSSDUG00000004474	ddx54	89	56.925	ENSEASG00005009501	DDX54	98	54.218	Equus_asinus_asinus
ENSSDUG00000004474	ddx54	98	59.862	ENSECAG00000012890	DDX54	95	59.930	Equus_caballus
ENSSDUG00000004474	ddx54	62	86.076	ENSEEUG00000008296	-	66	86.076	Erinaceus_europaeus
ENSSDUG00000004474	ddx54	100	76.207	ENSELUG00000013533	ddx54	98	76.923	Esox_lucius
ENSSDUG00000004474	ddx54	98	58.844	ENSFCAG00000027806	DDX54	94	59.220	Felis_catus
ENSSDUG00000004474	ddx54	93	63.379	ENSFALG00000007737	DDX54	98	63.131	Ficedula_albicollis
ENSSDUG00000004474	ddx54	88	74.942	ENSFDAG00000019953	DDX54	92	74.942	Fukomys_damarensis
ENSSDUG00000004474	ddx54	100	82.306	ENSFHEG00000018425	ddx54	98	81.628	Fundulus_heteroclitus
ENSSDUG00000004474	ddx54	96	75.148	ENSGMOG00000011746	ddx54	100	75.236	Gadus_morhua
ENSSDUG00000004474	ddx54	95	62.874	ENSGALG00000007490	DDX54	95	62.745	Gallus_gallus
ENSSDUG00000004474	ddx54	100	78.555	ENSGAFG00000010336	ddx54	98	78.271	Gambusia_affinis
ENSSDUG00000004474	ddx54	100	79.888	ENSGACG00000016793	ddx54	98	80.092	Gasterosteus_aculeatus
ENSSDUG00000004474	ddx54	95	64.320	ENSGAGG00000022803	DDX54	98	64.125	Gopherus_agassizii
ENSSDUG00000004474	ddx54	98	59.472	ENSGGOG00000010414	DDX54	94	59.577	Gorilla_gorilla
ENSSDUG00000004474	ddx54	98	59.676	ENSHGLG00000014411	DDX54	94	59.834	Heterocephalus_glaber_female
ENSSDUG00000004474	ddx54	98	59.745	ENSHGLG00100018511	DDX54	94	59.342	Heterocephalus_glaber_male
ENSSDUG00000004474	ddx54	100	79.886	ENSHCOG00000019287	ddx54	98	79.860	Hippocampus_comes
ENSSDUG00000004474	ddx54	100	73.672	ENSIPUG00000015556	Ddx54	98	72.603	Ictalurus_punctatus
ENSSDUG00000004474	ddx54	89	58.166	ENSSTOG00000004068	DDX54	98	58.355	Ictidomys_tridecemlineatus
ENSSDUG00000004474	ddx54	98	59.884	ENSJJAG00000015712	Ddx54	94	60.284	Jaculus_jaculus
ENSSDUG00000004474	ddx54	100	80.527	ENSKMAG00000017520	ddx54	98	80.280	Kryptolebias_marmoratus
ENSSDUG00000004474	ddx54	100	79.955	ENSLBEG00000019480	ddx54	98	79.354	Labrus_bergylta
ENSSDUG00000004474	ddx54	97	65.854	ENSLACG00000008944	DDX54	94	65.425	Latimeria_chalumnae
ENSSDUG00000004474	ddx54	100	72.260	ENSLOCG00000008485	ddx54	98	71.977	Lepisosteus_oculatus
ENSSDUG00000004474	ddx54	91	51.453	ENSLAFG00000027782	DDX54	98	50.619	Loxodonta_africana
ENSSDUG00000004474	ddx54	98	58.998	ENSMFAG00000043636	DDX54	94	59.302	Macaca_fascicularis
ENSSDUG00000004474	ddx54	98	59.112	ENSMMUG00000021795	DDX54	94	59.302	Macaca_mulatta
ENSSDUG00000004474	ddx54	98	53.348	ENSMNEG00000043605	DDX54	94	53.605	Macaca_nemestrina
ENSSDUG00000004474	ddx54	98	56.328	ENSMLEG00000038981	DDX54	94	56.577	Mandrillus_leucophaeus
ENSSDUG00000004474	ddx54	100	85.877	ENSMAMG00000012784	ddx54	97	86.219	Mastacembelus_armatus
ENSSDUG00000004474	ddx54	100	80.435	ENSMZEG00005018773	ddx54	98	80.886	Maylandia_zebra
ENSSDUG00000004474	ddx54	95	61.905	ENSMGAG00000009183	DDX54	98	61.314	Meleagris_gallopavo
ENSSDUG00000004474	ddx54	98	60.255	ENSMAUG00000011051	Ddx54	94	60.190	Mesocricetus_auratus
ENSSDUG00000004474	ddx54	100	58.937	ENSMICG00000012217	DDX54	94	59.320	Microcebus_murinus
ENSSDUG00000004474	ddx54	100	59.639	ENSMOCG00000010835	Ddx54	94	59.788	Microtus_ochrogaster
ENSSDUG00000004474	ddx54	98	80.653	ENSMMOG00000009634	ddx54	98	80.420	Mola_mola
ENSSDUG00000004474	ddx54	95	61.025	ENSMODG00000003413	DDX54	95	60.219	Monodelphis_domestica
ENSSDUG00000004474	ddx54	100	85.469	ENSMALG00000022098	ddx54	98	85.082	Monopterus_albus
ENSSDUG00000004474	ddx54	98	60.875	MGP_CAROLIEiJ_G0027665	Ddx54	94	61.105	Mus_caroli
ENSSDUG00000004474	ddx54	98	60.945	ENSMUSG00000029599	Ddx54	94	61.176	Mus_musculus
ENSSDUG00000004474	ddx54	98	60.209	MGP_PahariEiJ_G0024247	Ddx54	94	60.308	Mus_pahari
ENSSDUG00000004474	ddx54	98	60.690	MGP_SPRETEiJ_G0028665	Ddx54	94	60.915	Mus_spretus
ENSSDUG00000004474	ddx54	98	59.676	ENSMPUG00000002574	DDX54	94	59.645	Mustela_putorius_furo
ENSSDUG00000004474	ddx54	98	59.954	ENSNGAG00000021313	Ddx54	94	59.342	Nannospalax_galili
ENSSDUG00000004474	ddx54	70	92.118	ENSNBRG00000005588	ddx54	73	92.118	Neolamprologus_brichardi
ENSSDUG00000004474	ddx54	98	59.700	ENSNLEG00000000162	DDX54	94	60.024	Nomascus_leucogenys
ENSSDUG00000004474	ddx54	79	63.584	ENSMEUG00000015392	DDX54	99	63.796	Notamacropus_eugenii
ENSSDUG00000004474	ddx54	88	53.117	ENSOPRG00000012000	DDX54	84	52.785	Ochotona_princeps
ENSSDUG00000004474	ddx54	98	57.558	ENSODEG00000014863	DDX54	94	57.601	Octodon_degus
ENSSDUG00000004474	ddx54	98	58.009	ENSOCUG00000008932	DDX54	94	57.076	Oryctolagus_cuniculus
ENSSDUG00000004474	ddx54	100	79.224	ENSORLG00000007385	ddx54	96	79.196	Oryzias_latipes
ENSSDUG00000004474	ddx54	100	78.905	ENSORLG00020000858	ddx54	96	78.867	Oryzias_latipes_hni
ENSSDUG00000004474	ddx54	100	79.338	ENSORLG00015006956	ddx54	96	79.314	Oryzias_latipes_hsok
ENSSDUG00000004474	ddx54	98	80.094	ENSOMEG00000003663	ddx54	98	80.257	Oryzias_melastigma
ENSSDUG00000004474	ddx54	98	60.209	ENSOGAG00000004210	DDX54	94	60.190	Otolemur_garnettii
ENSSDUG00000004474	ddx54	98	59.472	ENSOARG00000008363	DDX54	94	60.024	Ovis_aries
ENSSDUG00000004474	ddx54	98	59.540	ENSPPAG00000042178	DDX54	94	59.390	Pan_paniscus
ENSSDUG00000004474	ddx54	98	56.720	ENSPPRG00000005223	DDX54	94	57.969	Panthera_pardus
ENSSDUG00000004474	ddx54	76	61.836	ENSPTIG00000019728	DDX54	86	60.911	Panthera_tigris_altaica
ENSSDUG00000004474	ddx54	98	59.609	ENSPTRG00000005483	DDX54	94	59.694	Pan_troglodytes
ENSSDUG00000004474	ddx54	98	58.884	ENSPANG00000008883	DDX54	94	59.302	Papio_anubis
ENSSDUG00000004474	ddx54	100	74.744	ENSPKIG00000018272	ddx54	96	74.971	Paramormyrops_kingsleyae
ENSSDUG00000004474	ddx54	53	77.754	ENSPSIG00000005055	DDX54	96	77.468	Pelodiscus_sinensis
ENSSDUG00000004474	ddx54	95	74.519	ENSPMGG00000010988	ddx54	98	74.387	Periophthalmus_magnuspinnatus
ENSSDUG00000004474	ddx54	100	59.393	ENSPEMG00000016701	Ddx54	94	60.142	Peromyscus_maniculatus_bairdii
ENSSDUG00000004474	ddx54	100	81.257	ENSPFOG00000019822	ddx54	98	81.024	Poecilia_formosa
ENSSDUG00000004474	ddx54	100	81.257	ENSPLAG00000004530	ddx54	98	81.024	Poecilia_latipinna
ENSSDUG00000004474	ddx54	100	81.257	ENSPMEG00000010803	ddx54	98	81.024	Poecilia_mexicana
ENSSDUG00000004474	ddx54	100	81.766	ENSPREG00000014372	ddx54	98	81.542	Poecilia_reticulata
ENSSDUG00000004474	ddx54	98	59.242	ENSPPYG00000004984	DDX54	94	59.437	Pongo_abelii
ENSSDUG00000004474	ddx54	98	56.265	ENSPCAG00000008462	DDX54	94	55.582	Procavia_capensis
ENSSDUG00000004474	ddx54	98	59.117	ENSPCOG00000006050	DDX54	94	59.408	Propithecus_coquereli
ENSSDUG00000004474	ddx54	90	80.545	ENSPVAG00000017347	DDX54	86	80.545	Pteropus_vampyrus
ENSSDUG00000004474	ddx54	100	72.893	ENSPNAG00000014459	ddx54	97	80.834	Pygocentrus_nattereri
ENSSDUG00000004474	ddx54	98	60.739	ENSRNOG00000001377	Ddx54	90	60.188	Rattus_norvegicus
ENSSDUG00000004474	ddx54	100	58.837	ENSRBIG00000032535	DDX54	94	58.885	Rhinopithecus_bieti
ENSSDUG00000004474	ddx54	100	55.481	ENSRROG00000029557	DDX54	94	55.749	Rhinopithecus_roxellana
ENSSDUG00000004474	ddx54	91	34.448	YDL031W	-	77	36.632	Saccharomyces_cerevisiae
ENSSDUG00000004474	ddx54	98	59.816	ENSSBOG00000028194	DDX54	94	60.047	Saimiri_boliviensis_boliviensis
ENSSDUG00000004474	ddx54	87	71.067	ENSSHAG00000015646	DDX54	97	59.805	Sarcophilus_harrisii
ENSSDUG00000004474	ddx54	98	75.786	ENSSFOG00015014981	ddx54	97	75.325	Scleropages_formosus
ENSSDUG00000004474	ddx54	98	84.028	ENSSMAG00000003210	ddx54	98	84.838	Scophthalmus_maximus
ENSSDUG00000004474	ddx54	100	97.941	ENSSLDG00000010380	ddx54	100	97.941	Seriola_lalandi_dorsalis
ENSSDUG00000004474	ddx54	98	62.998	ENSSPUG00000014141	DDX54	94	62.724	Sphenodon_punctatus
ENSSDUG00000004474	ddx54	93	81.304	ENSSPAG00000022918	ddx54	95	81.495	Stegastes_partitus
ENSSDUG00000004474	ddx54	98	59.521	ENSSSCG00000009876	DDX54	94	59.859	Sus_scrofa
ENSSDUG00000004474	ddx54	94	62.500	ENSTGUG00000009126	DDX54	98	61.863	Taeniopygia_guttata
ENSSDUG00000004474	ddx54	100	81.414	ENSTRUG00000014939	ddx54	98	81.417	Takifugu_rubripes
ENSSDUG00000004474	ddx54	100	79.209	ENSTNIG00000009037	ddx54	98	78.481	Tetraodon_nigroviridis
ENSSDUG00000004474	ddx54	71	79.012	ENSTBEG00000003783	DDX54	68	79.012	Tupaia_belangeri
ENSSDUG00000004474	ddx54	98	57.013	ENSTTRG00000016678	DDX54	94	57.109	Tursiops_truncatus
ENSSDUG00000004474	ddx54	98	59.485	ENSUAMG00000028387	DDX54	97	59.530	Ursus_americanus
ENSSDUG00000004474	ddx54	82	79.500	ENSUMAG00000010245	DDX54	94	79.894	Ursus_maritimus
ENSSDUG00000004474	ddx54	100	59.707	ENSVVUG00000010212	DDX54	96	59.700	Vulpes_vulpes
ENSSDUG00000004474	ddx54	99	61.574	ENSXETG00000016410	ddx54	96	62.768	Xenopus_tropicalis
ENSSDUG00000004474	ddx54	100	79.931	ENSXCOG00000002909	ddx54	98	79.790	Xiphophorus_couchianus
ENSSDUG00000004474	ddx54	100	81.651	ENSXMAG00000005312	ddx54	98	81.425	Xiphophorus_maculatus