EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000004610 (Gene tree)
Gene ID: 111216484
Gene Symbol: ptrhd1
Alias: si:dkey-34f16.5
Full Name: peptidyl-tRNA hydrolase domain containing 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 2716 bases
Position: chrBDQW01000025.1:3695441-3698156
Accession: 111216484
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000006232	PTH2	PF01981.16	3.2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000006358	-	2035	XM_022738031	ENSSDUP00000006232	149 (aa)	XP_022593752	-

Gene Model

Click here to download ENSSDUG00000004610's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000004610's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000004610	ptrhd1	85	59.375	ENSG00000184924	PTRHD1	91	59.375	Homo_sapiens
ENSSDUG00000004610	ptrhd1	85	92.063	ENSAPOG00000024433	ptrhd1	100	92.063	Acanthochromis_polyacanthus
ENSSDUG00000004610	ptrhd1	85	55.469	ENSAMEG00000002651	PTRHD1	91	55.469	Ailuropoda_melanoleuca
ENSSDUG00000004610	ptrhd1	85	94.444	ENSACIG00000002596	ptrhd1	100	94.444	Amphilophus_citrinellus
ENSSDUG00000004610	ptrhd1	85	92.063	ENSAOCG00000007632	ptrhd1	100	92.063	Amphiprion_ocellaris
ENSSDUG00000004610	ptrhd1	85	92.063	ENSAPEG00000011491	ptrhd1	100	92.063	Amphiprion_percula
ENSSDUG00000004610	ptrhd1	85	96.032	ENSATEG00000019199	ptrhd1	100	96.032	Anabas_testudineus
ENSSDUG00000004610	ptrhd1	85	59.375	ENSANAG00000019089	PTRHD1	91	59.375	Aotus_nancymaae
ENSSDUG00000004610	ptrhd1	85	95.238	ENSACLG00000000814	ptrhd1	100	95.238	Astatotilapia_calliptera
ENSSDUG00000004610	ptrhd1	85	78.740	ENSAMXG00000034266	ptrhd1	89	78.125	Astyanax_mexicanus
ENSSDUG00000004610	ptrhd1	85	62.500	ENSBTAG00000015012	PTRHD1	94	60.902	Bos_taurus
ENSSDUG00000004610	ptrhd1	76	51.327	WBGene00050885	Y94H6A.12	100	48.387	Caenorhabditis_elegans
ENSSDUG00000004610	ptrhd1	85	58.594	ENSCJAG00000008012	PTRHD1	91	58.594	Callithrix_jacchus
ENSSDUG00000004610	ptrhd1	89	57.143	ENSCAFG00000024865	PTRHD1	94	57.143	Canis_familiaris
ENSSDUG00000004610	ptrhd1	85	62.500	ENSCHIG00000014757	PTRHD1	94	60.902	Capra_hircus
ENSSDUG00000004610	ptrhd1	85	58.594	ENSTSYG00000009995	PTRHD1	91	58.594	Carlito_syrichta
ENSSDUG00000004610	ptrhd1	85	58.594	ENSCPOG00000005561	PTRHD1	91	58.594	Cavia_porcellus
ENSSDUG00000004610	ptrhd1	85	59.375	ENSCCAG00000033856	PTRHD1	91	59.375	Cebus_capucinus
ENSSDUG00000004610	ptrhd1	85	59.843	ENSCATG00000033690	PTRHD1	91	59.843	Cercocebus_atys
ENSSDUG00000004610	ptrhd1	85	59.375	ENSCLAG00000006505	PTRHD1	88	59.375	Chinchilla_lanigera
ENSSDUG00000004610	ptrhd1	85	59.375	ENSCSAG00000008490	PTRHD1	91	59.375	Chlorocebus_sabaeus
ENSSDUG00000004610	ptrhd1	85	48.819	ENSCHOG00000001920	PTRHD1	92	48.819	Choloepus_hoffmanni
ENSSDUG00000004610	ptrhd1	85	57.812	ENSCPBG00000022276	PTRHD1	91	57.812	Chrysemys_picta_bellii
ENSSDUG00000004610	ptrhd1	79	58.974	ENSCING00000019647	-	99	58.974	Ciona_intestinalis
ENSSDUG00000004610	ptrhd1	85	59.375	ENSCANG00000034444	PTRHD1	91	59.375	Colobus_angolensis_palliatus
ENSSDUG00000004610	ptrhd1	85	58.594	ENSCGRG00001003289	Ptrhd1	60	58.594	Cricetulus_griseus_chok1gshd
ENSSDUG00000004610	ptrhd1	85	58.594	ENSCGRG00000011834	Ptrhd1	91	58.594	Cricetulus_griseus_crigri
ENSSDUG00000004610	ptrhd1	85	93.701	ENSCSEG00000006943	ptrhd1	100	93.701	Cynoglossus_semilaevis
ENSSDUG00000004610	ptrhd1	85	92.063	ENSCVAG00000016345	ptrhd1	100	92.063	Cyprinodon_variegatus
ENSSDUG00000004610	ptrhd1	85	82.540	ENSDARG00000016122	ptrhd1	100	82.540	Danio_rerio
ENSSDUG00000004610	ptrhd1	95	54.861	ENSDNOG00000043646	PTRHD1	95	54.861	Dasypus_novemcinctus
ENSSDUG00000004610	ptrhd1	85	57.812	ENSDORG00000026776	Ptrhd1	91	57.812	Dipodomys_ordii
ENSSDUG00000004610	ptrhd1	79	63.248	FBgn0038446	CG14903	98	63.248	Drosophila_melanogaster
ENSSDUG00000004610	ptrhd1	81	48.760	ENSETEG00000009379	-	90	48.760	Echinops_telfairi
ENSSDUG00000004610	ptrhd1	79	60.684	ENSEBUG00000002249	ptrhd1	97	60.684	Eptatretus_burgeri
ENSSDUG00000004610	ptrhd1	88	42.424	ENSEASG00005001302	-	93	42.424	Equus_asinus_asinus
ENSSDUG00000004610	ptrhd1	86	42.636	ENSECAG00000005314	-	88	42.636	Equus_caballus
ENSSDUG00000004610	ptrhd1	89	59.398	ENSECAG00000017730	PTRHD1	94	59.398	Equus_caballus
ENSSDUG00000004610	ptrhd1	89	58.647	ENSEEUG00000004263	PTRHD1	94	58.647	Erinaceus_europaeus
ENSSDUG00000004610	ptrhd1	85	83.333	ENSELUG00000003837	ptrhd1	100	83.333	Esox_lucius
ENSSDUG00000004610	ptrhd1	89	56.391	ENSFCAG00000003648	PTRHD1	94	56.391	Felis_catus
ENSSDUG00000004610	ptrhd1	85	60.938	ENSFDAG00000004017	PTRHD1	91	60.938	Fukomys_damarensis
ENSSDUG00000004610	ptrhd1	85	89.683	ENSFHEG00000009135	ptrhd1	100	89.683	Fundulus_heteroclitus
ENSSDUG00000004610	ptrhd1	77	57.391	ENSGALG00000016610	PTRHD1	93	54.962	Gallus_gallus
ENSSDUG00000004610	ptrhd1	85	88.889	ENSGAFG00000005717	ptrhd1	100	88.889	Gambusia_affinis
ENSSDUG00000004610	ptrhd1	84	92.800	ENSGACG00000006743	ptrhd1	98	92.800	Gasterosteus_aculeatus
ENSSDUG00000004610	ptrhd1	85	60.630	ENSGAGG00000023951	PTRHD1	100	60.630	Gopherus_agassizii
ENSSDUG00000004610	ptrhd1	85	59.055	ENSGGOG00000043870	PTRHD1	100	59.055	Gorilla_gorilla
ENSSDUG00000004610	ptrhd1	85	95.238	ENSHBUG00000014289	ptrhd1	100	95.238	Haplochromis_burtoni
ENSSDUG00000004610	ptrhd1	85	62.500	ENSHGLG00000008203	PTRHD1	91	62.500	Heterocephalus_glaber_female
ENSSDUG00000004610	ptrhd1	85	61.719	ENSHGLG00100012553	PTRHD1	91	61.719	Heterocephalus_glaber_male
ENSSDUG00000004610	ptrhd1	85	60.938	ENSHGLG00100004341	-	93	60.938	Heterocephalus_glaber_male
ENSSDUG00000004610	ptrhd1	85	92.913	ENSHCOG00000013504	ptrhd1	100	92.913	Hippocampus_comes
ENSSDUG00000004610	ptrhd1	79	77.778	ENSIPUG00000004885	ptrhd1	98	77.778	Ictalurus_punctatus
ENSSDUG00000004610	ptrhd1	85	59.375	ENSSTOG00000006030	PTRHD1	91	59.375	Ictidomys_tridecemlineatus
ENSSDUG00000004610	ptrhd1	85	58.594	ENSJJAG00000024180	Ptrhd1	92	58.594	Jaculus_jaculus
ENSSDUG00000004610	ptrhd1	75	89.286	ENSKMAG00000016961	ptrhd1	99	89.286	Kryptolebias_marmoratus
ENSSDUG00000004610	ptrhd1	85	92.857	ENSLBEG00000024406	ptrhd1	100	92.857	Labrus_bergylta
ENSSDUG00000004610	ptrhd1	77	70.435	ENSLACG00000018052	PTRHD1	100	67.460	Latimeria_chalumnae
ENSSDUG00000004610	ptrhd1	85	82.031	ENSLOCG00000015890	ptrhd1	100	82.031	Lepisosteus_oculatus
ENSSDUG00000004610	ptrhd1	89	57.895	ENSLAFG00000014453	PTRHD1	94	57.895	Loxodonta_africana
ENSSDUG00000004610	ptrhd1	85	58.594	ENSMFAG00000040267	PTRHD1	91	58.594	Macaca_fascicularis
ENSSDUG00000004610	ptrhd1	85	58.594	ENSMMUG00000009598	PTRHD1	91	58.594	Macaca_mulatta
ENSSDUG00000004610	ptrhd1	85	58.594	ENSMNEG00000035044	PTRHD1	91	58.594	Macaca_nemestrina
ENSSDUG00000004610	ptrhd1	85	58.268	ENSMLEG00000030314	PTRHD1	91	58.268	Mandrillus_leucophaeus
ENSSDUG00000004610	ptrhd1	85	92.063	ENSMAMG00000021201	ptrhd1	100	92.063	Mastacembelus_armatus
ENSSDUG00000004610	ptrhd1	85	95.238	ENSMZEG00005021808	ptrhd1	100	95.238	Maylandia_zebra
ENSSDUG00000004610	ptrhd1	85	59.375	ENSMAUG00000019251	Ptrhd1	91	59.375	Mesocricetus_auratus
ENSSDUG00000004610	ptrhd1	85	60.156	ENSMICG00000001578	PTRHD1	91	60.156	Microcebus_murinus
ENSSDUG00000004610	ptrhd1	85	57.812	ENSMOCG00000001204	Ptrhd1	91	57.812	Microtus_ochrogaster
ENSSDUG00000004610	ptrhd1	85	93.651	ENSMMOG00000015284	ptrhd1	100	93.651	Mola_mola
ENSSDUG00000004610	ptrhd1	81	57.025	ENSMODG00000015895	PTRHD1	89	57.025	Monodelphis_domestica
ENSSDUG00000004610	ptrhd1	85	92.063	ENSMALG00000003471	ptrhd1	100	92.063	Monopterus_albus
ENSSDUG00000004610	ptrhd1	85	57.812	MGP_CAROLIEiJ_G0017582	Ptrhd1	91	57.812	Mus_caroli
ENSSDUG00000004610	ptrhd1	85	57.812	ENSMUSG00000096199	Ptrhd1	91	57.812	Mus_musculus
ENSSDUG00000004610	ptrhd1	85	57.812	MGP_SPRETEiJ_G0018426	Ptrhd1	91	57.812	Mus_spretus
ENSSDUG00000004610	ptrhd1	89	55.639	ENSMPUG00000014016	PTRHD1	94	55.639	Mustela_putorius_furo
ENSSDUG00000004610	ptrhd1	89	55.639	ENSMLUG00000014127	PTRHD1	94	55.639	Myotis_lucifugus
ENSSDUG00000004610	ptrhd1	85	57.031	ENSNGAG00000016335	Ptrhd1	91	57.031	Nannospalax_galili
ENSSDUG00000004610	ptrhd1	85	95.238	ENSNBRG00000009690	ptrhd1	100	95.238	Neolamprologus_brichardi
ENSSDUG00000004610	ptrhd1	85	59.375	ENSNLEG00000000990	PTRHD1	91	59.375	Nomascus_leucogenys
ENSSDUG00000004610	ptrhd1	85	58.594	ENSOPRG00000008600	PTRHD1	91	58.594	Ochotona_princeps
ENSSDUG00000004610	ptrhd1	85	57.812	ENSODEG00000007805	PTRHD1	88	57.812	Octodon_degus
ENSSDUG00000004610	ptrhd1	91	90.441	ENSONIG00000015722	ptrhd1	100	90.441	Oreochromis_niloticus
ENSSDUG00000004610	ptrhd1	90	54.074	ENSOCUG00000015432	PTRHD1	96	54.074	Oryctolagus_cuniculus
ENSSDUG00000004610	ptrhd1	78	82.051	ENSORLG00000028768	ptrhd1	99	82.051	Oryzias_latipes
ENSSDUG00000004610	ptrhd1	78	82.051	ENSORLG00020002857	ptrhd1	99	82.051	Oryzias_latipes_hni
ENSSDUG00000004610	ptrhd1	78	82.051	ENSORLG00015018271	ptrhd1	100	82.051	Oryzias_latipes_hsok
ENSSDUG00000004610	ptrhd1	85	80.315	ENSOMEG00000017594	ptrhd1	100	80.315	Oryzias_melastigma
ENSSDUG00000004610	ptrhd1	85	55.469	ENSOGAG00000000756	PTRHD1	91	55.469	Otolemur_garnettii
ENSSDUG00000004610	ptrhd1	85	62.500	ENSOARG00000018052	PTRHD1	94	60.902	Ovis_aries
ENSSDUG00000004610	ptrhd1	85	59.375	ENSPPAG00000035395	PTRHD1	91	59.375	Pan_paniscus
ENSSDUG00000004610	ptrhd1	89	56.391	ENSPPRG00000022961	PTRHD1	94	56.391	Panthera_pardus
ENSSDUG00000004610	ptrhd1	89	56.391	ENSPTIG00000012136	PTRHD1	94	56.391	Panthera_tigris_altaica
ENSSDUG00000004610	ptrhd1	85	59.375	ENSPTRG00000011716	PTRHD1	91	59.375	Pan_troglodytes
ENSSDUG00000004610	ptrhd1	85	60.156	ENSPANG00000006781	PTRHD1	91	60.156	Papio_anubis
ENSSDUG00000004610	ptrhd1	86	73.438	ENSPKIG00000015207	ptrhd1	87	73.438	Paramormyrops_kingsleyae
ENSSDUG00000004610	ptrhd1	78	91.379	ENSPMGG00000020297	ptrhd1	100	89.683	Periophthalmus_magnuspinnatus
ENSSDUG00000004610	ptrhd1	71	67.925	ENSPMAG00000007352	ptrhd1	93	67.521	Petromyzon_marinus
ENSSDUG00000004610	ptrhd1	77	59.483	ENSPCIG00000025242	PTRHD1	92	59.483	Phascolarctos_cinereus
ENSSDUG00000004610	ptrhd1	87	86.923	ENSPFOG00000004468	ptrhd1	92	86.923	Poecilia_formosa
ENSSDUG00000004610	ptrhd1	85	88.889	ENSPLAG00000018019	ptrhd1	100	88.889	Poecilia_latipinna
ENSSDUG00000004610	ptrhd1	85	89.683	ENSPMEG00000001321	ptrhd1	100	89.683	Poecilia_mexicana
ENSSDUG00000004610	ptrhd1	85	89.683	ENSPREG00000017624	ptrhd1	100	89.683	Poecilia_reticulata
ENSSDUG00000004610	ptrhd1	85	59.375	ENSPPYG00000012597	PTRHD1	91	59.375	Pongo_abelii
ENSSDUG00000004610	ptrhd1	90	54.815	ENSPCAG00000007535	PTRHD1	96	54.815	Procavia_capensis
ENSSDUG00000004610	ptrhd1	85	59.375	ENSPCOG00000003110	PTRHD1	91	59.375	Propithecus_coquereli
ENSSDUG00000004610	ptrhd1	85	58.594	ENSPVAG00000017514	PTRHD1	91	58.594	Pteropus_vampyrus
ENSSDUG00000004610	ptrhd1	85	95.238	ENSPNYG00000016755	ptrhd1	100	95.238	Pundamilia_nyererei
ENSSDUG00000004610	ptrhd1	85	80.315	ENSPNAG00000028214	ptrhd1	100	80.315	Pygocentrus_nattereri
ENSSDUG00000004610	ptrhd1	85	58.594	ENSRNOG00000004059	Ptrhd1	91	58.594	Rattus_norvegicus
ENSSDUG00000004610	ptrhd1	85	59.375	ENSRBIG00000032190	PTRHD1	91	59.375	Rhinopithecus_bieti
ENSSDUG00000004610	ptrhd1	85	59.375	ENSRROG00000029627	PTRHD1	91	59.375	Rhinopithecus_roxellana
ENSSDUG00000004610	ptrhd1	85	58.594	ENSSBOG00000031751	PTRHD1	91	58.594	Saimiri_boliviensis_boliviensis
ENSSDUG00000004610	ptrhd1	77	58.621	ENSSHAG00000005774	PTRHD1	75	58.621	Sarcophilus_harrisii
ENSSDUG00000004610	ptrhd1	81	76.860	ENSSFOG00015000526	ptrhd1	99	76.860	Scleropages_formosus
ENSSDUG00000004610	ptrhd1	78	93.966	ENSSMAG00000004450	ptrhd1	100	90.551	Scophthalmus_maximus
ENSSDUG00000004610	ptrhd1	85	100.000	ENSSLDG00000006231	ptrhd1	100	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000004610	ptrhd1	77	62.069	ENSSPUG00000002905	PTRHD1	95	60.630	Sphenodon_punctatus
ENSSDUG00000004610	ptrhd1	85	94.444	ENSSPAG00000000997	ptrhd1	100	94.444	Stegastes_partitus
ENSSDUG00000004610	ptrhd1	83	47.967	ENSSSCG00000040441	-	93	47.967	Sus_scrofa
ENSSDUG00000004610	ptrhd1	90	54.074	ENSTGUG00000015169	-	98	54.074	Taeniopygia_guttata
ENSSDUG00000004610	ptrhd1	85	86.508	ENSTRUG00000007201	ptrhd1	100	86.508	Takifugu_rubripes
ENSSDUG00000004610	ptrhd1	85	87.302	ENSTNIG00000019143	ptrhd1	100	87.302	Tetraodon_nigroviridis
ENSSDUG00000004610	ptrhd1	85	56.250	ENSTTRG00000015128	PTRHD1	91	56.250	Tursiops_truncatus
ENSSDUG00000004610	ptrhd1	89	54.887	ENSUAMG00000007305	PTRHD1	94	54.887	Ursus_americanus
ENSSDUG00000004610	ptrhd1	90	57.037	ENSVPAG00000005556	PTRHD1	96	57.037	Vicugna_pacos
ENSSDUG00000004610	ptrhd1	83	59.677	ENSXETG00000021176	ptrhd1	96	59.701	Xenopus_tropicalis
ENSSDUG00000004610	ptrhd1	85	88.889	ENSXCOG00000019083	ptrhd1	100	88.889	Xiphophorus_couchianus
ENSSDUG00000004610	ptrhd1	85	88.889	ENSXMAG00000024458	ptrhd1	100	88.889	Xiphophorus_maculatus