EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000004634 (Gene tree)
Gene ID: 111237782
Gene Symbol: exosc2
Alias: fa97b01|wu:fa97b01|zgc:110117
Full Name: exosome component 2
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 3269 bases
Position: chrBDQW01001092.1:343298-346566
Accession: 111237782
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000006307	ECR1_N	PF14382.6	8.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000006435	-	885	XM_022767011	ENSSDUP00000006307	294 (aa)	XP_022622732	-

Gene Model

Click here to download ENSSDUG00000004634's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000004634's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000004634	exosc2	100	76.689	ENSG00000130713	EXOSC2	100	76.689	Homo_sapiens
ENSSDUG00000004634	exosc2	91	94.776	ENSAPOG00000008861	exosc2	97	94.776	Acanthochromis_polyacanthus
ENSSDUG00000004634	exosc2	100	76.014	ENSAMEG00000016239	EXOSC2	100	76.014	Ailuropoda_melanoleuca
ENSSDUG00000004634	exosc2	100	96.622	ENSACIG00000019054	exosc2	100	96.622	Amphilophus_citrinellus
ENSSDUG00000004634	exosc2	100	95.946	ENSAOCG00000008577	exosc2	100	95.946	Amphiprion_ocellaris
ENSSDUG00000004634	exosc2	100	95.946	ENSAOCG00000004983	exosc2	100	95.946	Amphiprion_ocellaris
ENSSDUG00000004634	exosc2	100	95.946	ENSAPEG00000014088	exosc2	100	95.946	Amphiprion_percula
ENSSDUG00000004634	exosc2	100	96.284	ENSATEG00000018680	exosc2	100	96.284	Anabas_testudineus
ENSSDUG00000004634	exosc2	99	76.351	ENSAPLG00000012516	EXOSC2	99	76.351	Anas_platyrhynchos
ENSSDUG00000004634	exosc2	99	75.427	ENSACAG00000002706	EXOSC2	99	75.427	Anolis_carolinensis
ENSSDUG00000004634	exosc2	100	95.946	ENSACLG00000013613	exosc2	100	95.946	Astatotilapia_calliptera
ENSSDUG00000004634	exosc2	100	86.577	ENSAMXG00000042605	exosc2	100	86.577	Astyanax_mexicanus
ENSSDUG00000004634	exosc2	100	76.689	ENSBTAG00000048071	EXOSC2	100	76.689	Bos_taurus
ENSSDUG00000004634	exosc2	93	42.029	WBGene00022232	exos-2	90	42.029	Caenorhabditis_elegans
ENSSDUG00000004634	exosc2	100	76.689	ENSCJAG00000020537	EXOSC2	100	76.689	Callithrix_jacchus
ENSSDUG00000004634	exosc2	99	75.254	ENSCAFG00000019941	EXOSC2	99	75.254	Canis_familiaris
ENSSDUG00000004634	exosc2	100	75.338	ENSCAFG00020024047	EXOSC2	100	75.338	Canis_lupus_dingo
ENSSDUG00000004634	exosc2	100	76.351	ENSCHIG00000021398	EXOSC2	100	76.351	Capra_hircus
ENSSDUG00000004634	exosc2	100	75.676	ENSTSYG00000001805	EXOSC2	100	75.676	Carlito_syrichta
ENSSDUG00000004634	exosc2	100	73.401	ENSCPOG00000005902	EXOSC2	100	73.401	Cavia_porcellus
ENSSDUG00000004634	exosc2	100	76.689	ENSCCAG00000019749	EXOSC2	100	76.689	Cebus_capucinus
ENSSDUG00000004634	exosc2	100	76.689	ENSCATG00000025389	-	100	76.689	Cercocebus_atys
ENSSDUG00000004634	exosc2	100	76.014	ENSCLAG00000006195	EXOSC2	100	76.014	Chinchilla_lanigera
ENSSDUG00000004634	exosc2	100	76.689	ENSCSAG00000014760	EXOSC2	100	76.689	Chlorocebus_sabaeus
ENSSDUG00000004634	exosc2	100	75.338	ENSCHOG00000000858	EXOSC2	100	75.338	Choloepus_hoffmanni
ENSSDUG00000004634	exosc2	99	75.593	ENSCPBG00000022626	EXOSC2	99	75.593	Chrysemys_picta_bellii
ENSSDUG00000004634	exosc2	96	62.937	ENSCING00000014934	-	94	62.937	Ciona_intestinalis
ENSSDUG00000004634	exosc2	91	66.058	ENSCSAVG00000003684	-	99	66.058	Ciona_savignyi
ENSSDUG00000004634	exosc2	99	70.169	ENSCANG00000029298	-	99	70.169	Colobus_angolensis_palliatus
ENSSDUG00000004634	exosc2	100	76.689	ENSCANG00000039828	-	100	76.689	Colobus_angolensis_palliatus
ENSSDUG00000004634	exosc2	100	76.014	ENSCGRG00001013981	Exosc2	100	76.014	Cricetulus_griseus_chok1gshd
ENSSDUG00000004634	exosc2	100	76.014	ENSCGRG00000017629	Exosc2	100	76.014	Cricetulus_griseus_crigri
ENSSDUG00000004634	exosc2	100	94.898	ENSCSEG00000016539	exosc2	100	94.898	Cynoglossus_semilaevis
ENSSDUG00000004634	exosc2	100	94.257	ENSCVAG00000022260	exosc2	100	94.257	Cyprinodon_variegatus
ENSSDUG00000004634	exosc2	100	81.208	ENSDARG00000028688	exosc2	100	81.208	Danio_rerio
ENSSDUG00000004634	exosc2	91	76.296	ENSDNOG00000025767	-	100	76.296	Dasypus_novemcinctus
ENSSDUG00000004634	exosc2	100	76.351	ENSDORG00000009238	Exosc2	100	76.351	Dipodomys_ordii
ENSSDUG00000004634	exosc2	89	61.132	FBgn0034879	Rrp4	88	62.264	Drosophila_melanogaster
ENSSDUG00000004634	exosc2	93	63.869	ENSETEG00000016130	-	98	63.869	Echinops_telfairi
ENSSDUG00000004634	exosc2	100	76.014	ENSEASG00005008475	EXOSC2	86	76.014	Equus_asinus_asinus
ENSSDUG00000004634	exosc2	100	76.014	ENSECAG00000007897	EXOSC2	86	76.014	Equus_caballus
ENSSDUG00000004634	exosc2	100	91.275	ENSELUG00000013641	exosc2	100	91.275	Esox_lucius
ENSSDUG00000004634	exosc2	100	76.768	ENSFCAG00000025936	EXOSC2	100	76.768	Felis_catus
ENSSDUG00000004634	exosc2	100	74.411	ENSFALG00000001446	EXOSC2	100	74.411	Ficedula_albicollis
ENSSDUG00000004634	exosc2	100	75.338	ENSFDAG00000017196	EXOSC2	100	75.338	Fukomys_damarensis
ENSSDUG00000004634	exosc2	100	94.932	ENSFHEG00000018571	exosc2	100	94.932	Fundulus_heteroclitus
ENSSDUG00000004634	exosc2	100	86.195	ENSGMOG00000011785	exosc2	99	86.195	Gadus_morhua
ENSSDUG00000004634	exosc2	99	78.983	ENSGALG00000040373	EXOSC2	99	78.983	Gallus_gallus
ENSSDUG00000004634	exosc2	99	93.898	ENSGAFG00000010283	exosc2	99	93.898	Gambusia_affinis
ENSSDUG00000004634	exosc2	100	91.892	ENSGACG00000016805	exosc2	99	91.892	Gasterosteus_aculeatus
ENSSDUG00000004634	exosc2	90	77.528	ENSGAGG00000021026	EXOSC2	99	77.528	Gopherus_agassizii
ENSSDUG00000004634	exosc2	100	76.014	ENSGGOG00000010578	EXOSC2	100	76.014	Gorilla_gorilla
ENSSDUG00000004634	exosc2	100	96.622	ENSHBUG00000022437	exosc2	100	96.622	Haplochromis_burtoni
ENSSDUG00000004634	exosc2	100	76.014	ENSHGLG00000012834	EXOSC2	100	76.014	Heterocephalus_glaber_female
ENSSDUG00000004634	exosc2	100	76.014	ENSHGLG00100007092	EXOSC2	100	76.014	Heterocephalus_glaber_male
ENSSDUG00000004634	exosc2	100	92.568	ENSHCOG00000019130	exosc2	100	92.568	Hippocampus_comes
ENSSDUG00000004634	exosc2	100	84.512	ENSIPUG00000015397	exosc2	100	84.512	Ictalurus_punctatus
ENSSDUG00000004634	exosc2	100	76.014	ENSSTOG00000005999	EXOSC2	100	76.014	Ictidomys_tridecemlineatus
ENSSDUG00000004634	exosc2	100	75.676	ENSJJAG00000003188	Exosc2	100	75.676	Jaculus_jaculus
ENSSDUG00000004634	exosc2	99	93.857	ENSKMAG00000017397	exosc2	99	93.857	Kryptolebias_marmoratus
ENSSDUG00000004634	exosc2	100	93.919	ENSLBEG00000019269	exosc2	100	93.919	Labrus_bergylta
ENSSDUG00000004634	exosc2	100	79.125	ENSLACG00000015530	EXOSC2	100	79.125	Latimeria_chalumnae
ENSSDUG00000004634	exosc2	100	76.094	ENSLAFG00000006984	EXOSC2	100	76.094	Loxodonta_africana
ENSSDUG00000004634	exosc2	100	76.689	ENSMFAG00000000597	-	100	76.689	Macaca_fascicularis
ENSSDUG00000004634	exosc2	100	66.216	ENSMFAG00000034160	-	84	66.216	Macaca_fascicularis
ENSSDUG00000004634	exosc2	100	73.649	ENSMMUG00000012498	EXOSC2	100	73.649	Macaca_mulatta
ENSSDUG00000004634	exosc2	100	76.689	ENSMNEG00000031861	-	100	76.689	Macaca_nemestrina
ENSSDUG00000004634	exosc2	100	66.892	ENSMNEG00000028704	-	91	66.892	Macaca_nemestrina
ENSSDUG00000004634	exosc2	100	76.689	ENSMLEG00000042587	-	100	76.689	Mandrillus_leucophaeus
ENSSDUG00000004634	exosc2	100	66.892	ENSMLEG00000029891	-	91	66.892	Mandrillus_leucophaeus
ENSSDUG00000004634	exosc2	100	96.284	ENSMAMG00000012466	exosc2	100	96.284	Mastacembelus_armatus
ENSSDUG00000004634	exosc2	100	95.270	ENSMZEG00005018737	exosc2	100	95.270	Maylandia_zebra
ENSSDUG00000004634	exosc2	99	78.644	ENSMGAG00000005450	EXOSC2	99	78.644	Meleagris_gallopavo
ENSSDUG00000004634	exosc2	100	76.014	ENSMAUG00000008299	Exosc2	100	76.014	Mesocricetus_auratus
ENSSDUG00000004634	exosc2	100	76.689	ENSMICG00000015495	EXOSC2	100	76.689	Microcebus_murinus
ENSSDUG00000004634	exosc2	100	76.351	ENSMOCG00000008262	Exosc2	100	76.351	Microtus_ochrogaster
ENSSDUG00000004634	exosc2	100	94.257	ENSMMOG00000009616	exosc2	100	94.257	Mola_mola
ENSSDUG00000004634	exosc2	100	76.689	ENSMODG00000012114	EXOSC2	100	76.689	Monodelphis_domestica
ENSSDUG00000004634	exosc2	100	96.622	ENSMALG00000022132	exosc2	100	96.622	Monopterus_albus
ENSSDUG00000004634	exosc2	100	75.676	MGP_CAROLIEiJ_G0023415	Exosc2	100	75.676	Mus_caroli
ENSSDUG00000004634	exosc2	100	75.676	ENSMUSG00000039356	Exosc2	100	75.676	Mus_musculus
ENSSDUG00000004634	exosc2	100	75.338	MGP_PahariEiJ_G0024872	Exosc2	100	75.338	Mus_pahari
ENSSDUG00000004634	exosc2	100	75.676	MGP_SPRETEiJ_G0024332	Exosc2	100	75.676	Mus_spretus
ENSSDUG00000004634	exosc2	100	76.351	ENSMPUG00000012686	EXOSC2	100	76.351	Mustela_putorius_furo
ENSSDUG00000004634	exosc2	100	76.174	ENSMLUG00000008776	EXOSC2	100	76.174	Myotis_lucifugus
ENSSDUG00000004634	exosc2	100	75.676	ENSNGAG00000019383	Exosc2	100	75.676	Nannospalax_galili
ENSSDUG00000004634	exosc2	100	95.946	ENSNBRG00000005453	exosc2	100	95.946	Neolamprologus_brichardi
ENSSDUG00000004634	exosc2	100	76.689	ENSNLEG00000012533	EXOSC2	100	76.689	Nomascus_leucogenys
ENSSDUG00000004634	exosc2	100	60.811	ENSMEUG00000000795	EXOSC2	100	60.811	Notamacropus_eugenii
ENSSDUG00000004634	exosc2	56	78.571	ENSOPRG00000008688	EXOSC2	56	78.571	Ochotona_princeps
ENSSDUG00000004634	exosc2	100	75.676	ENSODEG00000016880	-	100	75.676	Octodon_degus
ENSSDUG00000004634	exosc2	87	77.432	ENSODEG00000019513	-	100	77.432	Octodon_degus
ENSSDUG00000004634	exosc2	100	95.946	ENSONIG00000014086	exosc2	100	95.946	Oreochromis_niloticus
ENSSDUG00000004634	exosc2	100	74.324	ENSOANG00000001044	EXOSC2	100	74.324	Ornithorhynchus_anatinus
ENSSDUG00000004634	exosc2	100	76.351	ENSOCUG00000007138	EXOSC2	100	76.351	Oryctolagus_cuniculus
ENSSDUG00000004634	exosc2	100	93.919	ENSORLG00000007443	exosc2	100	93.919	Oryzias_latipes
ENSSDUG00000004634	exosc2	100	94.257	ENSORLG00020018902	exosc2	100	94.257	Oryzias_latipes_hni
ENSSDUG00000004634	exosc2	100	93.919	ENSORLG00015006767	exosc2	100	93.919	Oryzias_latipes_hsok
ENSSDUG00000004634	exosc2	100	93.243	ENSOMEG00000003533	exosc2	100	93.243	Oryzias_melastigma
ENSSDUG00000004634	exosc2	100	76.351	ENSOGAG00000007558	EXOSC2	100	76.351	Otolemur_garnettii
ENSSDUG00000004634	exosc2	100	76.174	ENSOARG00000007438	EXOSC2	100	76.174	Ovis_aries
ENSSDUG00000004634	exosc2	100	76.689	ENSPPAG00000034796	EXOSC2	100	76.689	Pan_paniscus
ENSSDUG00000004634	exosc2	100	77.104	ENSPPRG00000001089	EXOSC2	100	77.104	Panthera_pardus
ENSSDUG00000004634	exosc2	100	77.104	ENSPTIG00000021163	EXOSC2	100	77.104	Panthera_tigris_altaica
ENSSDUG00000004634	exosc2	100	76.689	ENSPTRG00000021476	EXOSC2	100	76.689	Pan_troglodytes
ENSSDUG00000004634	exosc2	100	76.689	ENSPTRG00000045766	-	100	76.689	Pan_troglodytes
ENSSDUG00000004634	exosc2	100	76.689	ENSPANG00000025966	EXOSC2	100	76.689	Papio_anubis
ENSSDUG00000004634	exosc2	100	83.729	ENSPKIG00000004271	exosc2	100	83.729	Paramormyrops_kingsleyae
ENSSDUG00000004634	exosc2	99	75.932	ENSPSIG00000006743	EXOSC2	99	75.932	Pelodiscus_sinensis
ENSSDUG00000004634	exosc2	87	94.922	ENSPMGG00000010980	exosc2	99	94.922	Periophthalmus_magnuspinnatus
ENSSDUG00000004634	exosc2	100	76.351	ENSPEMG00000006345	Exosc2	100	76.351	Peromyscus_maniculatus_bairdii
ENSSDUG00000004634	exosc2	93	78.755	ENSPMAG00000001280	exosc2	92	78.755	Petromyzon_marinus
ENSSDUG00000004634	exosc2	100	76.689	ENSPCIG00000024122	EXOSC2	97	76.689	Phascolarctos_cinereus
ENSSDUG00000004634	exosc2	99	94.257	ENSPFOG00000019819	exosc2	99	94.257	Poecilia_formosa
ENSSDUG00000004634	exosc2	99	94.576	ENSPLAG00000004605	exosc2	99	94.576	Poecilia_latipinna
ENSSDUG00000004634	exosc2	99	94.576	ENSPMEG00000010976	exosc2	99	94.576	Poecilia_mexicana
ENSSDUG00000004634	exosc2	99	94.237	ENSPREG00000014306	exosc2	99	94.237	Poecilia_reticulata
ENSSDUG00000004634	exosc2	100	76.689	ENSPPYG00000019695	EXOSC2	100	76.689	Pongo_abelii
ENSSDUG00000004634	exosc2	100	77.027	ENSPCAG00000013400	EXOSC2	100	77.027	Procavia_capensis
ENSSDUG00000004634	exosc2	100	76.351	ENSPCOG00000017639	EXOSC2	100	76.351	Propithecus_coquereli
ENSSDUG00000004634	exosc2	100	75.676	ENSPVAG00000001513	EXOSC2	100	75.676	Pteropus_vampyrus
ENSSDUG00000004634	exosc2	100	96.622	ENSPNYG00000007383	exosc2	100	96.622	Pundamilia_nyererei
ENSSDUG00000004634	exosc2	100	87.205	ENSPNAG00000014281	exosc2	100	87.205	Pygocentrus_nattereri
ENSSDUG00000004634	exosc2	100	76.014	ENSRNOG00000009245	Exosc2	100	76.014	Rattus_norvegicus
ENSSDUG00000004634	exosc2	100	76.689	ENSRBIG00000031203	-	100	76.689	Rhinopithecus_bieti
ENSSDUG00000004634	exosc2	99	70.508	ENSRBIG00000029791	-	99	70.508	Rhinopithecus_bieti
ENSSDUG00000004634	exosc2	99	69.492	ENSRROG00000043609	-	99	69.492	Rhinopithecus_roxellana
ENSSDUG00000004634	exosc2	100	76.689	ENSRROG00000010827	-	100	76.689	Rhinopithecus_roxellana
ENSSDUG00000004634	exosc2	90	41.118	YHR069C	-	84	41.118	Saccharomyces_cerevisiae
ENSSDUG00000004634	exosc2	100	76.351	ENSSBOG00000022712	EXOSC2	100	76.351	Saimiri_boliviensis_boliviensis
ENSSDUG00000004634	exosc2	100	76.689	ENSSHAG00000016050	EXOSC2	100	76.689	Sarcophilus_harrisii
ENSSDUG00000004634	exosc2	100	84.746	ENSSFOG00015011245	exosc2	100	84.746	Scleropages_formosus
ENSSDUG00000004634	exosc2	100	96.599	ENSSMAG00000003112	exosc2	100	96.599	Scophthalmus_maximus
ENSSDUG00000004634	exosc2	100	98.980	ENSSLDG00000010616	exosc2	100	98.980	Seriola_lalandi_dorsalis
ENSSDUG00000004634	exosc2	99	76.174	ENSSPUG00000013391	EXOSC2	99	76.174	Sphenodon_punctatus
ENSSDUG00000004634	exosc2	100	95.946	ENSSPAG00000022947	exosc2	100	95.946	Stegastes_partitus
ENSSDUG00000004634	exosc2	100	77.703	ENSSSCG00000005704	EXOSC2	100	77.703	Sus_scrofa
ENSSDUG00000004634	exosc2	99	74.576	ENSTGUG00000004697	EXOSC2	99	74.576	Taeniopygia_guttata
ENSSDUG00000004634	exosc2	100	85.811	ENSTRUG00000022436	exosc2	100	85.811	Takifugu_rubripes
ENSSDUG00000004634	exosc2	100	71.622	ENSTTRG00000015159	EXOSC2	100	71.622	Tursiops_truncatus
ENSSDUG00000004634	exosc2	91	76.384	ENSUAMG00000009651	EXOSC2	95	76.384	Ursus_americanus
ENSSDUG00000004634	exosc2	100	75.676	ENSUMAG00000018726	EXOSC2	100	75.676	Ursus_maritimus
ENSSDUG00000004634	exosc2	100	75.338	ENSVVUG00000027665	EXOSC2	100	75.338	Vulpes_vulpes
ENSSDUG00000004634	exosc2	100	76.014	ENSXETG00000001340	exosc2	100	76.014	Xenopus_tropicalis
ENSSDUG00000004634	exosc2	99	93.898	ENSXMAG00000005265	exosc2	99	93.898	Xiphophorus_maculatus