EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000004636 (Gene tree)
Gene ID: 111235116
Gene Symbol: tshz2
Alias: wu:cegs2580
Full Name: teashirt zinc finger homeobox 2
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 47960 bases
Position: chrBDQW01000468.1:3372185-3420144
Accession: 111235116
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000006278	zf-met	PF12874.7	0.00046	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000006405	-	4517	XM_022763445	ENSSDUP00000006278	1026 (aa)	XP_022619166	UPI000BBE2473

Gene Model

Click here to download ENSSDUG00000004636's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000004636's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000004636	tshz2	100	95.322	ENSAPOG00000002486	tshz2	100	95.322	Acanthochromis_polyacanthus
ENSSDUG00000004636	tshz2	100	94.932	ENSACIG00000017256	tshz2	100	94.932	Amphilophus_citrinellus
ENSSDUG00000004636	tshz2	100	95.517	ENSAOCG00000023687	tshz2	100	95.517	Amphiprion_ocellaris
ENSSDUG00000004636	tshz2	100	95.127	ENSAPEG00000000720	tshz2	100	95.127	Amphiprion_percula
ENSSDUG00000004636	tshz2	100	96.101	ENSATEG00000024474	tshz2	100	96.101	Anabas_testudineus
ENSSDUG00000004636	tshz2	100	94.737	ENSACLG00000017920	tshz2	100	94.737	Astatotilapia_calliptera
ENSSDUG00000004636	tshz2	100	79.344	ENSAMXG00000001175	tshz2	100	79.344	Astyanax_mexicanus
ENSSDUG00000004636	tshz2	100	90.741	ENSCVAG00000010918	tshz2	100	90.741	Cyprinodon_variegatus
ENSSDUG00000004636	tshz2	100	92.203	ENSFHEG00000014202	tshz2	100	92.203	Fundulus_heteroclitus
ENSSDUG00000004636	tshz2	100	94.737	ENSHBUG00000007293	tshz2	100	94.737	Haplochromis_burtoni
ENSSDUG00000004636	tshz2	100	94.250	ENSMAMG00000005195	tshz2	100	94.250	Mastacembelus_armatus
ENSSDUG00000004636	tshz2	100	94.639	ENSMZEG00005023416	tshz2	100	94.639	Maylandia_zebra
ENSSDUG00000004636	tshz2	100	93.665	ENSMMOG00000014934	tshz2	100	93.665	Mola_mola
ENSSDUG00000004636	tshz2	92	45.490	ENSMMOG00000015527	tshz3b	99	44.681	Mola_mola
ENSSDUG00000004636	tshz2	99	92.892	ENSMALG00000018673	tshz2	99	92.596	Monopterus_albus
ENSSDUG00000004636	tshz2	55	56.463	ENSMUSG00000047907	Tshz2	100	56.775	Mus_musculus
ENSSDUG00000004636	tshz2	55	56.463	MGP_SPRETEiJ_G0025645	Tshz2	100	56.775	Mus_spretus
ENSSDUG00000004636	tshz2	100	94.639	ENSNBRG00000001911	tshz2	100	94.639	Neolamprologus_brichardi
ENSSDUG00000004636	tshz2	100	95.127	ENSONIG00000016558	tshz2	100	95.127	Oreochromis_niloticus
ENSSDUG00000004636	tshz2	100	88.304	ENSORLG00000016111	tshz2	100	88.499	Oryzias_latipes
ENSSDUG00000004636	tshz2	100	88.109	ENSORLG00020007414	tshz2	100	88.304	Oryzias_latipes_hni
ENSSDUG00000004636	tshz2	100	89.181	ENSOMEG00000017379	tshz2	100	89.376	Oryzias_melastigma
ENSSDUG00000004636	tshz2	100	85.509	ENSPMGG00000019609	tshz2	100	85.701	Periophthalmus_magnuspinnatus
ENSSDUG00000004636	tshz2	88	93.237	ENSPFOG00000020779	tshz2	100	93.237	Poecilia_formosa
ENSSDUG00000004636	tshz2	97	92.563	ENSPLAG00000012397	tshz2	98	92.563	Poecilia_latipinna
ENSSDUG00000004636	tshz2	100	92.495	ENSPMEG00000008480	tshz2	100	92.495	Poecilia_mexicana
ENSSDUG00000004636	tshz2	100	94.834	ENSPNYG00000021698	tshz2	100	94.834	Pundamilia_nyererei
ENSSDUG00000004636	tshz2	100	79.592	ENSPNAG00000020910	tshz2	100	79.592	Pygocentrus_nattereri
ENSSDUG00000004636	tshz2	100	99.805	ENSSLDG00000005026	tshz2	100	99.805	Seriola_lalandi_dorsalis
ENSSDUG00000004636	tshz2	95	95.803	ENSSPAG00000001957	tshz2	97	95.803	Stegastes_partitus
ENSSDUG00000004636	tshz2	100	86.965	ENSTRUG00000007670	tshz2	100	87.354	Takifugu_rubripes
ENSSDUG00000004636	tshz2	100	91.715	ENSXCOG00000015459	tshz2	100	91.715	Xiphophorus_couchianus
ENSSDUG00000004636	tshz2	100	92.008	ENSXMAG00000012685	tshz2	100	92.008	Xiphophorus_maculatus