EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000004657 (Gene tree)
Gene ID: 111235098
Gene Symbol: sall4
Alias: cb372|cb614|ik:tdsubc_2c1|sb:cb372|sb:cb614|wu:fa01g03|xx:tdsubc_2c1
Full Name: spalt like transcription factor 4
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 7820 bases
Position: chrBDQW01000468.1:3510244-3518063
Accession: 111235098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000006312	zf-C2H2	PF00096.26	1.3e-32	1	6
ENSSDUP00000006312	zf-C2H2	PF00096.26	1.3e-32	2	6
ENSSDUP00000006312	zf-C2H2	PF00096.26	1.3e-32	3	6
ENSSDUP00000006312	zf-C2H2	PF00096.26	1.3e-32	4	6
ENSSDUP00000006312	zf-C2H2	PF00096.26	1.3e-32	5	6
ENSSDUP00000006312	zf-C2H2	PF00096.26	1.3e-32	6	6
ENSSDUP00000006304	zf-C2H2	PF00096.26	1.5e-32	1	6
ENSSDUP00000006304	zf-C2H2	PF00096.26	1.5e-32	2	6
ENSSDUP00000006304	zf-C2H2	PF00096.26	1.5e-32	3	6
ENSSDUP00000006304	zf-C2H2	PF00096.26	1.5e-32	4	6
ENSSDUP00000006304	zf-C2H2	PF00096.26	1.5e-32	5	6
ENSSDUP00000006304	zf-C2H2	PF00096.26	1.5e-32	6	6
ENSSDUP00000006312	zf-met	PF12874.7	8.4e-15	1	3
ENSSDUP00000006312	zf-met	PF12874.7	8.4e-15	2	3
ENSSDUP00000006312	zf-met	PF12874.7	8.4e-15	3	3
ENSSDUP00000006304	zf-met	PF12874.7	9.5e-15	1	3
ENSSDUP00000006304	zf-met	PF12874.7	9.5e-15	2	3
ENSSDUP00000006304	zf-met	PF12874.7	9.5e-15	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000006431	-	5131	XM_022763420	ENSSDUP00000006304	1090 (aa)	XP_022619141	UPI000BBEFE64
ENSSDUT00000006439	-	4857	-	ENSSDUP00000006312	1071 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000004657's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000004657's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000004657	sall4	68	53.061	ENSSDUG00000011170	znf236	59	53.061
ENSSDUG00000004657	sall4	59	41.270	ENSSDUG00000000946	-	96	50.000
ENSSDUG00000004657	sall4	55	50.000	ENSSDUG00000006463	-	83	50.000
ENSSDUG00000004657	sall4	59	50.943	ENSSDUG00000009601	-	90	50.943
ENSSDUG00000004657	sall4	63	71.311	ENSSDUG00000010584	sall3b	89	65.385
ENSSDUG00000004657	sall4	58	53.061	ENSSDUG00000000799	-	67	46.296
ENSSDUG00000004657	sall4	99	65.385	ENSSDUG00000006507	sall1a	99	65.385
ENSSDUG00000004657	sall4	57	46.939	ENSSDUG00000015159	-	95	46.939

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000004657	sall4	100	44.202	ENSG00000101115	SALL4	100	53.333	Homo_sapiens
ENSSDUG00000004657	sall4	100	85.610	ENSAPOG00000002465	sall4	100	85.610	Acanthochromis_polyacanthus
ENSSDUG00000004657	sall4	99	45.147	ENSAMEG00000013250	-	100	44.136	Ailuropoda_melanoleuca
ENSSDUG00000004657	sall4	100	82.951	ENSACIG00000017298	sall4	100	82.676	Amphilophus_citrinellus
ENSSDUG00000004657	sall4	100	86.068	ENSAOCG00000023678	sall4	100	86.068	Amphiprion_ocellaris
ENSSDUG00000004657	sall4	100	86.251	ENSAPEG00000000751	sall4	100	86.251	Amphiprion_percula
ENSSDUG00000004657	sall4	100	87.982	ENSATEG00000024480	sall4	100	87.982	Anabas_testudineus
ENSSDUG00000004657	sall4	100	52.143	ENSAPLG00000006498	SALL4	100	52.756	Anas_platyrhynchos
ENSSDUG00000004657	sall4	100	52.393	ENSACAG00000012748	SALL4	100	52.900	Anolis_carolinensis
ENSSDUG00000004657	sall4	100	43.979	ENSANAG00000023352	SALL4	100	44.097	Aotus_nancymaae
ENSSDUG00000004657	sall4	100	82.692	ENSACLG00000017851	sall4	100	82.234	Astatotilapia_calliptera
ENSSDUG00000004657	sall4	99	67.116	ENSAMXG00000001254	sall4	99	67.351	Astyanax_mexicanus
ENSSDUG00000004657	sall4	100	42.609	ENSBTAG00000003101	SALL4	100	42.969	Bos_taurus
ENSSDUG00000004657	sall4	82	46.069	ENSCJAG00000000591	SALL4	97	46.069	Callithrix_jacchus
ENSSDUG00000004657	sall4	100	44.291	ENSCAFG00000011738	-	100	44.473	Canis_familiaris
ENSSDUG00000004657	sall4	100	44.204	ENSCAFG00020021870	SALL4	100	44.473	Canis_lupus_dingo
ENSSDUG00000004657	sall4	100	42.575	ENSCHIG00000026270	SALL4	100	42.796	Capra_hircus
ENSSDUG00000004657	sall4	100	43.451	ENSTSYG00000007359	SALL4	100	52.066	Carlito_syrichta
ENSSDUG00000004657	sall4	98	43.796	ENSCAPG00000012135	SALL4	95	44.033	Cavia_aperea
ENSSDUG00000004657	sall4	100	40.175	ENSCCAG00000029512	-	100	60.784	Cebus_capucinus
ENSSDUG00000004657	sall4	100	44.259	ENSCATG00000030757	SALL4	100	44.348	Cercocebus_atys
ENSSDUG00000004657	sall4	100	43.527	ENSCLAG00000010479	SALL4	100	44.066	Chinchilla_lanigera
ENSSDUG00000004657	sall4	100	44.172	ENSCSAG00000015269	SALL4	100	44.242	Chlorocebus_sabaeus
ENSSDUG00000004657	sall4	99	52.247	ENSCPBG00000014995	SALL4	99	52.732	Chrysemys_picta_bellii
ENSSDUG00000004657	sall4	100	44.202	ENSCANG00000036463	SALL4	100	44.281	Colobus_angolensis_palliatus
ENSSDUG00000004657	sall4	62	56.436	ENSCGRG00001019569	Sall4	90	56.436	Cricetulus_griseus_chok1gshd
ENSSDUG00000004657	sall4	62	56.436	ENSCGRG00000000462	Sall4	100	77.778	Cricetulus_griseus_crigri
ENSSDUG00000004657	sall4	100	84.110	ENSCSEG00000014604	sall4	100	84.110	Cynoglossus_semilaevis
ENSSDUG00000004657	sall4	100	80.660	ENSCVAG00000010815	sall4	100	80.935	Cyprinodon_variegatus
ENSSDUG00000004657	sall4	99	65.884	ENSDARG00000044485	sall4	99	65.732	Danio_rerio
ENSSDUG00000004657	sall4	100	44.214	ENSDNOG00000040633	SALL4	100	44.072	Dasypus_novemcinctus
ENSSDUG00000004657	sall4	100	41.306	ENSDORG00000012841	Sall4	100	77.027	Dipodomys_ordii
ENSSDUG00000004657	sall4	75	65.385	ENSETEG00000012475	-	63	65.385	Echinops_telfairi
ENSSDUG00000004657	sall4	100	44.560	ENSECAG00000018533	SALL4	100	44.646	Equus_caballus
ENSSDUG00000004657	sall4	100	43.913	ENSEEUG00000003649	SALL4	99	43.875	Erinaceus_europaeus
ENSSDUG00000004657	sall4	100	67.908	ENSELUG00000005696	sall4	100	67.819	Esox_lucius
ENSSDUG00000004657	sall4	100	44.377	ENSFCAG00000002822	SALL4	93	67.308	Felis_catus
ENSSDUG00000004657	sall4	100	51.099	ENSFALG00000013149	SALL4	100	51.800	Ficedula_albicollis
ENSSDUG00000004657	sall4	100	42.882	ENSFDAG00000017812	SALL4	100	43.505	Fukomys_damarensis
ENSSDUG00000004657	sall4	100	80.146	ENSFHEG00000014187	sall4	100	79.872	Fundulus_heteroclitus
ENSSDUG00000004657	sall4	100	73.655	ENSGMOG00000003822	sall4	100	73.747	Gadus_morhua
ENSSDUG00000004657	sall4	100	52.205	ENSGALG00000041365	SALL4	100	53.081	Gallus_gallus
ENSSDUG00000004657	sall4	100	80.220	ENSGAFG00000019925	sall4	100	80.952	Gambusia_affinis
ENSSDUG00000004657	sall4	100	81.370	ENSGACG00000011124	sall4	100	81.370	Gasterosteus_aculeatus
ENSSDUG00000004657	sall4	99	52.473	ENSGAGG00000002297	SALL4	100	52.595	Gopherus_agassizii
ENSSDUG00000004657	sall4	100	44.202	ENSGGOG00000001832	SALL4	100	44.281	Gorilla_gorilla
ENSSDUG00000004657	sall4	100	82.692	ENSHBUG00000007327	sall4	100	82.234	Haplochromis_burtoni
ENSSDUG00000004657	sall4	98	43.490	ENSHGLG00000009043	SALL4	95	43.451	Heterocephalus_glaber_female
ENSSDUG00000004657	sall4	98	43.490	ENSHGLG00100002722	SALL4	95	43.451	Heterocephalus_glaber_male
ENSSDUG00000004657	sall4	100	80.037	ENSHCOG00000008519	sall4	100	80.037	Hippocampus_comes
ENSSDUG00000004657	sall4	99	66.667	ENSIPUG00000019170	sall4	99	66.848	Ictalurus_punctatus
ENSSDUG00000004657	sall4	61	55.882	ENSSTOG00000025002	SALL4	100	83.099	Ictidomys_tridecemlineatus
ENSSDUG00000004657	sall4	100	43.793	ENSJJAG00000020688	Sall4	99	84.507	Jaculus_jaculus
ENSSDUG00000004657	sall4	100	83.853	ENSKMAG00000002501	sall4	100	84.404	Kryptolebias_marmoratus
ENSSDUG00000004657	sall4	100	84.495	ENSLBEG00000019951	sall4	100	84.495	Labrus_bergylta
ENSSDUG00000004657	sall4	98	48.336	ENSLACG00000013898	SALL4	99	59.474	Latimeria_chalumnae
ENSSDUG00000004657	sall4	100	64.331	ENSLOCG00000002427	sall4	100	64.706	Lepisosteus_oculatus
ENSSDUG00000004657	sall4	100	44.309	ENSLAFG00000004309	SALL4	100	44.723	Loxodonta_africana
ENSSDUG00000004657	sall4	100	44.133	ENSMFAG00000027169	SALL4	100	44.222	Macaca_fascicularis
ENSSDUG00000004657	sall4	88	46.035	ENSMMUG00000003870	SALL4	100	57.921	Macaca_mulatta
ENSSDUG00000004657	sall4	88	46.035	ENSMNEG00000035995	SALL4	93	46.020	Macaca_nemestrina
ENSSDUG00000004657	sall4	100	44.221	ENSMLEG00000030467	SALL4	100	44.309	Mandrillus_leucophaeus
ENSSDUG00000004657	sall4	100	87.103	ENSMAMG00000005223	sall4	100	87.103	Mastacembelus_armatus
ENSSDUG00000004657	sall4	100	82.601	ENSMZEG00005023418	sall4	100	82.143	Maylandia_zebra
ENSSDUG00000004657	sall4	75	65.385	ENSMGAG00000009344	SALL4	100	65.385	Meleagris_gallopavo
ENSSDUG00000004657	sall4	100	41.560	ENSMAUG00000015814	Sall4	100	74.699	Mesocricetus_auratus
ENSSDUG00000004657	sall4	100	44.406	ENSMICG00000000027	SALL4	100	44.309	Microcebus_murinus
ENSSDUG00000004657	sall4	100	42.096	ENSMOCG00000018245	Sall4	100	82.192	Microtus_ochrogaster
ENSSDUG00000004657	sall4	100	85.780	ENSMMOG00000014929	sall4	100	85.780	Mola_mola
ENSSDUG00000004657	sall4	98	48.944	ENSMODG00000016387	SALL4	97	47.201	Monodelphis_domestica
ENSSDUG00000004657	sall4	100	88.543	ENSMALG00000018709	sall4	100	88.762	Monopterus_albus
ENSSDUG00000004657	sall4	100	42.060	MGP_CAROLIEiJ_G0024723	Sall4	100	84.722	Mus_caroli
ENSSDUG00000004657	sall4	100	42.173	ENSMUSG00000027547	Sall4	100	84.722	Mus_musculus
ENSSDUG00000004657	sall4	100	41.052	MGP_PahariEiJ_G0026164	Sall4	100	84.722	Mus_pahari
ENSSDUG00000004657	sall4	100	42.002	MGP_SPRETEiJ_G0025643	Sall4	100	84.722	Mus_spretus
ENSSDUG00000004657	sall4	100	43.388	ENSMPUG00000017543	SALL4	96	43.750	Mustela_putorius_furo
ENSSDUG00000004657	sall4	98	44.091	ENSMLUG00000007060	-	98	43.902	Myotis_lucifugus
ENSSDUG00000004657	sall4	100	41.187	ENSMLUG00000008405	-	100	40.941	Myotis_lucifugus
ENSSDUG00000004657	sall4	99	34.701	ENSMLUG00000028073	-	99	34.170	Myotis_lucifugus
ENSSDUG00000004657	sall4	100	42.968	ENSNGAG00000017833	Sall4	100	42.586	Nannospalax_galili
ENSSDUG00000004657	sall4	100	83.318	ENSNBRG00000001829	sall4	100	82.860	Neolamprologus_brichardi
ENSSDUG00000004657	sall4	100	43.941	ENSNLEG00000007013	SALL4	100	44.021	Nomascus_leucogenys
ENSSDUG00000004657	sall4	86	65.385	ENSMEUG00000005793	-	99	59.615	Notamacropus_eugenii
ENSSDUG00000004657	sall4	100	44.080	ENSOPRG00000011640	SALL4	100	44.186	Ochotona_princeps
ENSSDUG00000004657	sall4	100	83.333	ENSONIG00000016557	sall4	100	83.333	Oreochromis_niloticus
ENSSDUG00000004657	sall4	100	52.795	ENSOANG00000008667	SALL4	97	52.957	Ornithorhynchus_anatinus
ENSSDUG00000004657	sall4	98	44.321	ENSOCUG00000011797	SALL4	98	44.567	Oryctolagus_cuniculus
ENSSDUG00000004657	sall4	100	79.487	ENSORLG00000016130	sall4	100	79.853	Oryzias_latipes
ENSSDUG00000004657	sall4	100	79.487	ENSORLG00020007339	sall4	100	79.853	Oryzias_latipes_hni
ENSSDUG00000004657	sall4	100	79.304	ENSORLG00015002265	sall4	100	79.670	Oryzias_latipes_hsok
ENSSDUG00000004657	sall4	100	79.579	ENSOMEG00000017344	sall4	100	79.762	Oryzias_melastigma
ENSSDUG00000004657	sall4	98	45.714	ENSOGAG00000013799	SALL4	99	45.429	Otolemur_garnettii
ENSSDUG00000004657	sall4	100	40.945	ENSOARG00000014570	SALL4	100	40.576	Ovis_aries
ENSSDUG00000004657	sall4	100	44.202	ENSPPAG00000038064	SALL4	100	44.281	Pan_paniscus
ENSSDUG00000004657	sall4	100	44.097	ENSPPRG00000008677	SALL4	93	67.308	Panthera_pardus
ENSSDUG00000004657	sall4	100	44.115	ENSPTRG00000013631	SALL4	100	44.194	Pan_troglodytes
ENSSDUG00000004657	sall4	88	46.035	ENSPANG00000021792	SALL4	93	46.020	Papio_anubis
ENSSDUG00000004657	sall4	100	65.312	ENSPKIG00000007074	sall4	100	65.583	Paramormyrops_kingsleyae
ENSSDUG00000004657	sall4	99	52.151	ENSPSIG00000009066	SALL4	100	52.636	Pelodiscus_sinensis
ENSSDUG00000004657	sall4	100	69.661	ENSPMGG00000022551	sall4	100	68.244	Periophthalmus_magnuspinnatus
ENSSDUG00000004657	sall4	100	41.531	ENSPEMG00000022706	Sall4	100	84.722	Peromyscus_maniculatus_bairdii
ENSSDUG00000004657	sall4	98	50.457	ENSPCIG00000022838	SALL4	97	49.225	Phascolarctos_cinereus
ENSSDUG00000004657	sall4	100	80.495	ENSPFOG00000001442	sall4	100	80.403	Poecilia_formosa
ENSSDUG00000004657	sall4	100	80.403	ENSPLAG00000008760	sall4	100	80.311	Poecilia_latipinna
ENSSDUG00000004657	sall4	100	80.586	ENSPMEG00000008497	sall4	100	80.495	Poecilia_mexicana
ENSSDUG00000004657	sall4	100	80.220	ENSPREG00000021140	sall4	100	80.128	Poecilia_reticulata
ENSSDUG00000004657	sall4	100	43.979	ENSPPYG00000011138	SALL4	100	44.242	Pongo_abelii
ENSSDUG00000004657	sall4	100	42.341	ENSPCAG00000004726	SALL4	99	42.599	Procavia_capensis
ENSSDUG00000004657	sall4	100	43.832	ENSPCOG00000016321	SALL4	90	58.911	Propithecus_coquereli
ENSSDUG00000004657	sall4	94	43.617	ENSPVAG00000002075	SALL4	94	43.398	Pteropus_vampyrus
ENSSDUG00000004657	sall4	100	82.493	ENSPNYG00000021738	sall4	100	82.035	Pundamilia_nyererei
ENSSDUG00000004657	sall4	99	68.631	ENSPNAG00000020929	sall4	99	68.722	Pygocentrus_nattereri
ENSSDUG00000004657	sall4	100	41.353	ENSRNOG00000050035	Sall4	87	65.385	Rattus_norvegicus
ENSSDUG00000004657	sall4	100	44.298	ENSRBIG00000039876	SALL4	100	44.367	Rhinopithecus_bieti
ENSSDUG00000004657	sall4	100	44.298	ENSRROG00000036585	SALL4	100	44.367	Rhinopithecus_roxellana
ENSSDUG00000004657	sall4	100	44.241	ENSSBOG00000030011	SALL4	92	57.921	Saimiri_boliviensis_boliviensis
ENSSDUG00000004657	sall4	97	65.385	ENSSHAG00000018013	SALL4	90	65.385	Sarcophilus_harrisii
ENSSDUG00000004657	sall4	100	64.382	ENSSFOG00015021075	sall4	100	64.563	Scleropages_formosus
ENSSDUG00000004657	sall4	100	88.726	ENSSMAG00000019218	sall4	99	88.726	Scophthalmus_maximus
ENSSDUG00000004657	sall4	100	98.165	ENSSLDG00000004973	sall4	100	98.165	Seriola_lalandi_dorsalis
ENSSDUG00000004657	sall4	100	88.176	ENSSPAG00000001978	sall4	100	88.084	Stegastes_partitus
ENSSDUG00000004657	sall4	100	43.679	ENSSSCG00000007479	SALL4	100	42.969	Sus_scrofa
ENSSDUG00000004657	sall4	100	81.502	ENSTRUG00000007410	sall4	100	81.227	Takifugu_rubripes
ENSSDUG00000004657	sall4	100	79.468	ENSTNIG00000012460	sall4	100	79.560	Tetraodon_nigroviridis
ENSSDUG00000004657	sall4	99	43.376	ENSTTRG00000007753	SALL4	99	43.312	Tursiops_truncatus
ENSSDUG00000004657	sall4	100	43.955	ENSUAMG00000010113	SALL4	100	44.328	Ursus_americanus
ENSSDUG00000004657	sall4	99	44.142	ENSUMAG00000024274	SALL4	98	44.343	Ursus_maritimus
ENSSDUG00000004657	sall4	100	49.379	ENSXETG00000012326	sall4	100	49.244	Xenopus_tropicalis
ENSSDUG00000004657	sall4	100	72.961	ENSXCOG00000015467	sall4	100	73.602	Xiphophorus_couchianus
ENSSDUG00000004657	sall4	100	72.354	ENSXMAG00000012692	sall4	100	72.993	Xiphophorus_maculatus