EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000004850 (Gene tree)
Gene ID: 111238870
Gene Symbol: tnpo3
Alias: zgc:55409
Full Name: transportin 3
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 10979 bases
Position: chrBDQW01001709.1:62875-73853
Accession: 111238870
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000006613	Xpo1	PF08389.12	6e-26	1	1
ENSSDUP00000006613	IBN_N	PF03810.19	8.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000006744	-	2977	XM_022768581	ENSSDUP00000006613	923 (aa)	XP_022624302	UPI000BBEA2E3

Gene Model

Click here to download ENSSDUG00000004850's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000004850's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000004850	tnpo3	100	86.674	ENSG00000064419	TNPO3	100	86.698	Homo_sapiens
ENSSDUG00000004850	tnpo3	100	98.483	ENSAPOG00000018347	tnpo3	100	98.483	Acanthochromis_polyacanthus
ENSSDUG00000004850	tnpo3	99	83.508	ENSAMEG00000005135	TNPO3	98	83.508	Ailuropoda_melanoleuca
ENSSDUG00000004850	tnpo3	96	94.790	ENSACIG00000005897	tnpo3	99	94.790	Amphilophus_citrinellus
ENSSDUG00000004850	tnpo3	100	98.592	ENSAOCG00000008264	tnpo3	100	98.592	Amphiprion_ocellaris
ENSSDUG00000004850	tnpo3	96	98.528	ENSAPEG00000024300	tnpo3	100	98.528	Amphiprion_percula
ENSSDUG00000004850	tnpo3	100	97.616	ENSATEG00000003197	tnpo3	100	97.616	Anabas_testudineus
ENSSDUG00000004850	tnpo3	72	83.607	ENSAPLG00000005946	TNPO3	91	83.607	Anas_platyrhynchos
ENSSDUG00000004850	tnpo3	82	86.184	ENSACAG00000013470	TNPO3	95	86.184	Anolis_carolinensis
ENSSDUG00000004850	tnpo3	100	86.674	ENSANAG00000037940	TNPO3	100	86.674	Aotus_nancymaae
ENSSDUG00000004850	tnpo3	100	97.183	ENSACLG00000005561	tnpo3	100	97.183	Astatotilapia_calliptera
ENSSDUG00000004850	tnpo3	100	93.066	ENSAMXG00000016236	tnpo3	100	93.066	Astyanax_mexicanus
ENSSDUG00000004850	tnpo3	100	86.891	ENSBTAG00000004992	TNPO3	100	86.931	Bos_taurus
ENSSDUG00000004850	tnpo3	100	86.782	ENSCJAG00000018085	TNPO3	100	86.782	Callithrix_jacchus
ENSSDUG00000004850	tnpo3	100	86.674	ENSCAFG00000001543	TNPO3	100	86.674	Canis_familiaris
ENSSDUG00000004850	tnpo3	100	86.674	ENSCAFG00020022462	TNPO3	99	86.270	Canis_lupus_dingo
ENSSDUG00000004850	tnpo3	100	86.782	ENSCHIG00000011721	TNPO3	100	86.782	Capra_hircus
ENSSDUG00000004850	tnpo3	100	86.782	ENSTSYG00000002989	TNPO3	100	86.782	Carlito_syrichta
ENSSDUG00000004850	tnpo3	72	86.022	ENSCAPG00000005843	TNPO3	91	86.022	Cavia_aperea
ENSSDUG00000004850	tnpo3	100	86.349	ENSCPOG00000039784	TNPO3	100	86.349	Cavia_porcellus
ENSSDUG00000004850	tnpo3	100	86.782	ENSCCAG00000033826	TNPO3	100	86.814	Cebus_capucinus
ENSSDUG00000004850	tnpo3	100	86.674	ENSCATG00000030018	TNPO3	100	86.698	Cercocebus_atys
ENSSDUG00000004850	tnpo3	100	85.545	ENSCLAG00000016298	TNPO3	100	85.545	Chinchilla_lanigera
ENSSDUG00000004850	tnpo3	100	86.674	ENSCSAG00000009966	TNPO3	100	86.674	Chlorocebus_sabaeus
ENSSDUG00000004850	tnpo3	99	61.830	ENSCHOG00000011547	TNPO3	99	61.830	Choloepus_hoffmanni
ENSSDUG00000004850	tnpo3	93	85.764	ENSCPBG00000017497	TNPO3	100	85.764	Chrysemys_picta_bellii
ENSSDUG00000004850	tnpo3	99	48.911	ENSCING00000005042	-	99	48.911	Ciona_intestinalis
ENSSDUG00000004850	tnpo3	99	47.874	ENSCSAVG00000008623	-	94	55.273	Ciona_savignyi
ENSSDUG00000004850	tnpo3	100	86.674	ENSCANG00000033070	TNPO3	100	86.698	Colobus_angolensis_palliatus
ENSSDUG00000004850	tnpo3	100	86.674	ENSCGRG00001015925	Tnpo3	100	86.674	Cricetulus_griseus_chok1gshd
ENSSDUG00000004850	tnpo3	100	86.674	ENSCGRG00000010379	Tnpo3	100	86.674	Cricetulus_griseus_crigri
ENSSDUG00000004850	tnpo3	100	95.016	ENSCSEG00000005952	tnpo3	100	95.016	Cynoglossus_semilaevis
ENSSDUG00000004850	tnpo3	100	95.125	ENSCVAG00000020285	tnpo3	100	95.125	Cyprinodon_variegatus
ENSSDUG00000004850	tnpo3	100	92.199	ENSDARG00000045680	tnpo3	100	92.199	Danio_rerio
ENSSDUG00000004850	tnpo3	100	86.566	ENSDNOG00000002556	TNPO3	100	86.566	Dasypus_novemcinctus
ENSSDUG00000004850	tnpo3	62	85.838	ENSDORG00000002433	Tnpo3	95	85.838	Dipodomys_ordii
ENSSDUG00000004850	tnpo3	99	43.488	FBgn0031456	Tnpo-SR	99	43.488	Drosophila_melanogaster
ENSSDUG00000004850	tnpo3	95	86.593	ENSETEG00000002101	TNPO3	90	86.593	Echinops_telfairi
ENSSDUG00000004850	tnpo3	99	70.978	ENSEBUG00000016931	tnpo3	99	70.978	Eptatretus_burgeri
ENSSDUG00000004850	tnpo3	100	86.566	ENSEASG00005008677	TNPO3	100	86.566	Equus_asinus_asinus
ENSSDUG00000004850	tnpo3	100	86.566	ENSECAG00000012815	TNPO3	100	86.581	Equus_caballus
ENSSDUG00000004850	tnpo3	60	31.280	ENSEEUG00000011681	IPO13	72	31.280	Erinaceus_europaeus
ENSSDUG00000004850	tnpo3	99	81.277	ENSEEUG00000005178	TNPO3	98	81.277	Erinaceus_europaeus
ENSSDUG00000004850	tnpo3	99	95.103	ENSELUG00000012153	tnpo3	99	95.103	Esox_lucius
ENSSDUG00000004850	tnpo3	100	86.674	ENSFCAG00000018186	TNPO3	100	86.698	Felis_catus
ENSSDUG00000004850	tnpo3	96	81.717	ENSFALG00000010667	TNPO3	100	81.717	Ficedula_albicollis
ENSSDUG00000004850	tnpo3	100	86.270	ENSFDAG00000019578	TNPO3	100	86.270	Fukomys_damarensis
ENSSDUG00000004850	tnpo3	99	94.891	ENSFHEG00000012859	tnpo3	99	94.891	Fundulus_heteroclitus
ENSSDUG00000004850	tnpo3	100	94.583	ENSGMOG00000007324	tnpo3	100	94.583	Gadus_morhua
ENSSDUG00000004850	tnpo3	61	85.512	ENSGALG00000039420	TNPO3	99	85.512	Gallus_gallus
ENSSDUG00000004850	tnpo3	100	97.291	ENSGACG00000000699	tnpo3	100	97.291	Gasterosteus_aculeatus
ENSSDUG00000004850	tnpo3	93	85.648	ENSGAGG00000006777	TNPO3	100	85.648	Gopherus_agassizii
ENSSDUG00000004850	tnpo3	100	86.674	ENSGGOG00000008339	TNPO3	100	86.698	Gorilla_gorilla
ENSSDUG00000004850	tnpo3	100	97.183	ENSHBUG00000008351	tnpo3	100	97.183	Haplochromis_burtoni
ENSSDUG00000004850	tnpo3	100	86.566	ENSHGLG00000004463	TNPO3	100	86.566	Heterocephalus_glaber_female
ENSSDUG00000004850	tnpo3	100	86.566	ENSHGLG00100005509	TNPO3	100	86.566	Heterocephalus_glaber_male
ENSSDUG00000004850	tnpo3	100	93.499	ENSHCOG00000007221	tnpo3	100	93.499	Hippocampus_comes
ENSSDUG00000004850	tnpo3	100	91.333	ENSIPUG00000014979	TNPO3	99	91.333	Ictalurus_punctatus
ENSSDUG00000004850	tnpo3	100	86.566	ENSSTOG00000004885	TNPO3	100	86.581	Ictidomys_tridecemlineatus
ENSSDUG00000004850	tnpo3	100	80.323	ENSJJAG00000013530	Tnpo3	100	80.323	Jaculus_jaculus
ENSSDUG00000004850	tnpo3	100	95.450	ENSKMAG00000010497	tnpo3	100	95.450	Kryptolebias_marmoratus
ENSSDUG00000004850	tnpo3	96	92.639	ENSLBEG00000011988	-	99	92.639	Labrus_bergylta
ENSSDUG00000004850	tnpo3	96	94.904	ENSLBEG00000016595	tnpo3	100	94.904	Labrus_bergylta
ENSSDUG00000004850	tnpo3	83	87.884	ENSLACG00000002351	TNPO3	99	87.884	Latimeria_chalumnae
ENSSDUG00000004850	tnpo3	100	92.091	ENSLOCG00000015556	tnpo3	100	92.091	Lepisosteus_oculatus
ENSSDUG00000004850	tnpo3	100	85.976	ENSLAFG00000002738	TNPO3	100	85.976	Loxodonta_africana
ENSSDUG00000004850	tnpo3	100	86.674	ENSMFAG00000032385	TNPO3	100	86.698	Macaca_fascicularis
ENSSDUG00000004850	tnpo3	100	86.674	ENSMMUG00000004311	TNPO3	100	86.698	Macaca_mulatta
ENSSDUG00000004850	tnpo3	100	86.674	ENSMNEG00000045277	TNPO3	100	86.698	Macaca_nemestrina
ENSSDUG00000004850	tnpo3	100	86.674	ENSMLEG00000037881	TNPO3	100	86.698	Mandrillus_leucophaeus
ENSSDUG00000004850	tnpo3	100	98.483	ENSMAMG00000021096	tnpo3	100	98.483	Mastacembelus_armatus
ENSSDUG00000004850	tnpo3	100	97.183	ENSMZEG00005015084	tnpo3	100	97.183	Maylandia_zebra
ENSSDUG00000004850	tnpo3	78	81.655	ENSMGAG00000002839	TNPO3	99	81.655	Meleagris_gallopavo
ENSSDUG00000004850	tnpo3	100	86.566	ENSMAUG00000013463	Tnpo3	100	86.566	Mesocricetus_auratus
ENSSDUG00000004850	tnpo3	85	33.077	ENSMICG00000011003	IPO13	97	33.136	Microcebus_murinus
ENSSDUG00000004850	tnpo3	100	86.674	ENSMICG00000000140	TNPO3	100	86.674	Microcebus_murinus
ENSSDUG00000004850	tnpo3	100	86.674	ENSMOCG00000013264	Tnpo3	100	86.674	Microtus_ochrogaster
ENSSDUG00000004850	tnpo3	100	96.533	ENSMMOG00000005887	tnpo3	100	96.533	Mola_mola
ENSSDUG00000004850	tnpo3	100	87.216	ENSMODG00000014700	TNPO3	100	87.216	Monodelphis_domestica
ENSSDUG00000004850	tnpo3	100	97.400	ENSMALG00000006675	tnpo3	100	97.400	Monopterus_albus
ENSSDUG00000004850	tnpo3	100	86.457	MGP_CAROLIEiJ_G0028176	Tnpo3	100	86.457	Mus_caroli
ENSSDUG00000004850	tnpo3	100	86.457	ENSMUSG00000012535	Tnpo3	100	86.457	Mus_musculus
ENSSDUG00000004850	tnpo3	100	86.566	MGP_PahariEiJ_G0021934	Tnpo3	100	86.566	Mus_pahari
ENSSDUG00000004850	tnpo3	100	86.349	MGP_SPRETEiJ_G0029176	Tnpo3	100	86.349	Mus_spretus
ENSSDUG00000004850	tnpo3	100	86.674	ENSMPUG00000006021	TNPO3	100	86.674	Mustela_putorius_furo
ENSSDUG00000004850	tnpo3	100	77.898	ENSMLUG00000000947	TNPO3	100	77.898	Myotis_lucifugus
ENSSDUG00000004850	tnpo3	100	86.566	ENSNGAG00000008722	Tnpo3	100	86.566	Nannospalax_galili
ENSSDUG00000004850	tnpo3	100	95.558	ENSNBRG00000019001	tnpo3	100	97.069	Neolamprologus_brichardi
ENSSDUG00000004850	tnpo3	100	83.490	ENSNLEG00000012491	TNPO3	100	86.282	Nomascus_leucogenys
ENSSDUG00000004850	tnpo3	52	30.288	ENSMEUG00000002835	IPO13	61	30.288	Notamacropus_eugenii
ENSSDUG00000004850	tnpo3	99	66.807	ENSMEUG00000002445	TNPO3	98	66.807	Notamacropus_eugenii
ENSSDUG00000004850	tnpo3	91	85.870	ENSOPRG00000006163	TNPO3	90	85.870	Ochotona_princeps
ENSSDUG00000004850	tnpo3	98	86.364	ENSODEG00000012826	TNPO3	100	86.364	Octodon_degus
ENSSDUG00000004850	tnpo3	100	97.183	ENSONIG00000007604	tnpo3	100	97.183	Oreochromis_niloticus
ENSSDUG00000004850	tnpo3	95	83.388	ENSOANG00000011451	TNPO3	100	83.388	Ornithorhynchus_anatinus
ENSSDUG00000004850	tnpo3	99	83.508	ENSOCUG00000010105	TNPO3	99	83.508	Oryctolagus_cuniculus
ENSSDUG00000004850	tnpo3	100	95.341	ENSORLG00000029369	tnpo3	100	95.341	Oryzias_latipes
ENSSDUG00000004850	tnpo3	100	95.341	ENSORLG00020003464	tnpo3	100	95.341	Oryzias_latipes_hni
ENSSDUG00000004850	tnpo3	100	95.450	ENSORLG00015002610	tnpo3	100	95.450	Oryzias_latipes_hsok
ENSSDUG00000004850	tnpo3	100	95.125	ENSOMEG00000021006	tnpo3	100	95.125	Oryzias_melastigma
ENSSDUG00000004850	tnpo3	100	86.566	ENSOGAG00000015340	TNPO3	100	86.566	Otolemur_garnettii
ENSSDUG00000004850	tnpo3	100	86.782	ENSOARG00000004026	TNPO3	100	86.782	Ovis_aries
ENSSDUG00000004850	tnpo3	100	86.674	ENSPPAG00000034975	TNPO3	100	86.698	Pan_paniscus
ENSSDUG00000004850	tnpo3	100	86.674	ENSPPRG00000002050	TNPO3	100	86.674	Panthera_pardus
ENSSDUG00000004850	tnpo3	100	86.674	ENSPTIG00000016167	TNPO3	100	86.674	Panthera_tigris_altaica
ENSSDUG00000004850	tnpo3	100	86.674	ENSPTRG00000019676	TNPO3	100	86.698	Pan_troglodytes
ENSSDUG00000004850	tnpo3	98	86.519	ENSPANG00000022226	TNPO3	100	86.282	Papio_anubis
ENSSDUG00000004850	tnpo3	100	89.816	ENSPKIG00000023234	tnpo3	100	89.816	Paramormyrops_kingsleyae
ENSSDUG00000004850	tnpo3	100	86.069	ENSPKIG00000008628	-	100	86.069	Paramormyrops_kingsleyae
ENSSDUG00000004850	tnpo3	62	89.085	ENSPMGG00000009763	tnpo3	99	89.085	Periophthalmus_magnuspinnatus
ENSSDUG00000004850	tnpo3	100	86.566	ENSPEMG00000000422	Tnpo3	100	86.566	Peromyscus_maniculatus_bairdii
ENSSDUG00000004850	tnpo3	95	72.933	ENSPMAG00000008621	tnpo3	100	72.933	Petromyzon_marinus
ENSSDUG00000004850	tnpo3	100	86.782	ENSPCIG00000011366	TNPO3	100	86.782	Phascolarctos_cinereus
ENSSDUG00000004850	tnpo3	100	94.366	ENSPFOG00000013592	tnpo3	99	94.366	Poecilia_formosa
ENSSDUG00000004850	tnpo3	100	94.366	ENSPLAG00000010188	tnpo3	100	94.366	Poecilia_latipinna
ENSSDUG00000004850	tnpo3	100	94.475	ENSPMEG00000022731	tnpo3	100	94.475	Poecilia_mexicana
ENSSDUG00000004850	tnpo3	100	86.674	ENSPPYG00000017990	TNPO3	100	86.674	Pongo_abelii
ENSSDUG00000004850	tnpo3	99	77.230	ENSPCAG00000010158	TNPO3	98	77.230	Procavia_capensis
ENSSDUG00000004850	tnpo3	87	87.171	ENSPCOG00000023901	TNPO3	96	87.171	Propithecus_coquereli
ENSSDUG00000004850	tnpo3	99	80.777	ENSPVAG00000015757	TNPO3	98	80.777	Pteropus_vampyrus
ENSSDUG00000004850	tnpo3	100	97.183	ENSPNYG00000002349	tnpo3	100	97.183	Pundamilia_nyererei
ENSSDUG00000004850	tnpo3	100	93.824	ENSPNAG00000001142	tnpo3	100	93.824	Pygocentrus_nattereri
ENSSDUG00000004850	tnpo3	100	86.566	ENSRNOG00000021758	Tnpo3	100	86.581	Rattus_norvegicus
ENSSDUG00000004850	tnpo3	100	86.566	ENSRBIG00000042549	TNPO3	100	86.581	Rhinopithecus_bieti
ENSSDUG00000004850	tnpo3	100	86.566	ENSRROG00000039264	TNPO3	100	86.566	Rhinopithecus_roxellana
ENSSDUG00000004850	tnpo3	93	78.529	ENSSBOG00000029642	TNPO3	100	78.529	Saimiri_boliviensis_boliviensis
ENSSDUG00000004850	tnpo3	96	87.203	ENSSHAG00000006837	TNPO3	100	87.203	Sarcophilus_harrisii
ENSSDUG00000004850	tnpo3	100	90.683	ENSSFOG00015001474	tnpo3	100	90.683	Scleropages_formosus
ENSSDUG00000004850	tnpo3	100	85.897	ENSSFOG00015004256	tnpo3	100	85.897	Scleropages_formosus
ENSSDUG00000004850	tnpo3	100	98.375	ENSSMAG00000010422	tnpo3	97	98.375	Scophthalmus_maximus
ENSSDUG00000004850	tnpo3	100	100.000	ENSSLDG00000016927	tnpo3	100	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000004850	tnpo3	95	74.917	ENSSARG00000013893	TNPO3	98	74.917	Sorex_araneus
ENSSDUG00000004850	tnpo3	99	81.562	ENSSPUG00000007457	TNPO3	99	81.602	Sphenodon_punctatus
ENSSDUG00000004850	tnpo3	79	98.623	ENSSPAG00000014209	tnpo3	99	98.623	Stegastes_partitus
ENSSDUG00000004850	tnpo3	100	86.674	ENSSSCG00000016572	TNPO3	100	86.698	Sus_scrofa
ENSSDUG00000004850	tnpo3	100	94.708	ENSTNIG00000003347	tnpo3	100	94.708	Tetraodon_nigroviridis
ENSSDUG00000004850	tnpo3	88	85.761	ENSTBEG00000007220	TNPO3	90	85.761	Tupaia_belangeri
ENSSDUG00000004850	tnpo3	99	74.055	ENSTTRG00000014618	TNPO3	98	74.055	Tursiops_truncatus
ENSSDUG00000004850	tnpo3	100	86.674	ENSUAMG00000021281	TNPO3	100	86.674	Ursus_americanus
ENSSDUG00000004850	tnpo3	100	86.674	ENSUMAG00000006882	TNPO3	100	86.674	Ursus_maritimus
ENSSDUG00000004850	tnpo3	85	73.852	ENSVPAG00000006166	TNPO3	88	73.852	Vicugna_pacos
ENSSDUG00000004850	tnpo3	100	86.674	ENSVVUG00000011004	TNPO3	100	86.856	Vulpes_vulpes
ENSSDUG00000004850	tnpo3	99	77.681	ENSXETG00000015009	tnpo3	99	77.681	Xenopus_tropicalis
ENSSDUG00000004850	tnpo3	100	94.366	ENSXMAG00000013062	tnpo3	100	94.366	Xiphophorus_maculatus