EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000005280 (Gene tree)
Gene ID: 111231543
Gene Symbol: rnaseh2a
Alias: zgc:56307
Full Name: ribonuclease H2 subunit A
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 30103 bases
Position: chrBDQW01000302.1:1083953-1114055
Accession: 111231543
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000007175	RNase_HII	PF01351.18	8e-51	1	1
ENSSDUP00000007180	RNase_HII	PF01351.18	8.8e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000007319	-	1227	XM_022758679	ENSSDUP00000007180	299 (aa)	XP_022614400	-
ENSSDUT00000007313	-	884	-	ENSSDUP00000007175	292 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000005280's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000005280's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000005280	rnaseh2a	99	59.450	ENSG00000104889	RNASEH2A	99	64.493	Homo_sapiens
ENSSDUG00000005280	rnaseh2a	97	92.226	ENSAPOG00000004101	rnaseh2a	92	92.254	Acanthochromis_polyacanthus
ENSSDUG00000005280	rnaseh2a	95	61.511	ENSAMEG00000012323	RNASEH2A	91	61.511	Ailuropoda_melanoleuca
ENSSDUG00000005280	rnaseh2a	87	90.196	ENSACIG00000002658	rnaseh2a	100	90.196	Amphilophus_citrinellus
ENSSDUG00000005280	rnaseh2a	97	91.873	ENSAOCG00000009217	rnaseh2a	92	91.901	Amphiprion_ocellaris
ENSSDUG00000005280	rnaseh2a	97	91.873	ENSAPEG00000022937	rnaseh2a	92	91.901	Amphiprion_percula
ENSSDUG00000005280	rnaseh2a	97	90.845	ENSATEG00000000908	rnaseh2a	92	91.166	Anabas_testudineus
ENSSDUG00000005280	rnaseh2a	96	72.143	ENSACAG00000003338	RNASEH2A	92	72.143	Anolis_carolinensis
ENSSDUG00000005280	rnaseh2a	99	44.108	ENSANAG00000037932	RNASEH2A	94	44.108	Aotus_nancymaae
ENSSDUG00000005280	rnaseh2a	100	85.616	ENSACLG00000009169	rnaseh2a	95	85.616	Astatotilapia_calliptera
ENSSDUG00000005280	rnaseh2a	98	75.789	ENSAMXG00000000436	rnaseh2a	92	75.789	Astyanax_mexicanus
ENSSDUG00000005280	rnaseh2a	96	62.989	ENSBTAG00000009661	RNASEH2A	95	61.938	Bos_taurus
ENSSDUG00000005280	rnaseh2a	82	52.459	WBGene00004383	rnh-2	82	52.459	Caenorhabditis_elegans
ENSSDUG00000005280	rnaseh2a	99	59.107	ENSCJAG00000004873	RNASEH2A	94	59.107	Callithrix_jacchus
ENSSDUG00000005280	rnaseh2a	97	60.554	ENSCAFG00000017159	RNASEH2A	94	60.554	Canis_familiaris
ENSSDUG00000005280	rnaseh2a	95	61.871	ENSCAFG00020005190	RNASEH2A	55	61.871	Canis_lupus_dingo
ENSSDUG00000005280	rnaseh2a	96	62.278	ENSCHIG00000014460	RNASEH2A	95	60.900	Capra_hircus
ENSSDUG00000005280	rnaseh2a	100	61.301	ENSTSYG00000025418	RNASEH2A	96	61.301	Carlito_syrichta
ENSSDUG00000005280	rnaseh2a	60	57.865	ENSCAPG00000003411	RNASEH2A	88	57.865	Cavia_aperea
ENSSDUG00000005280	rnaseh2a	98	60.417	ENSCPOG00000038877	RNASEH2A	91	64.314	Cavia_porcellus
ENSSDUG00000005280	rnaseh2a	99	59.450	ENSCCAG00000030453	RNASEH2A	94	59.450	Cebus_capucinus
ENSSDUG00000005280	rnaseh2a	99	60.137	ENSCATG00000029609	RNASEH2A	94	60.137	Cercocebus_atys
ENSSDUG00000005280	rnaseh2a	95	61.511	ENSCLAG00000014930	RNASEH2A	92	61.511	Chinchilla_lanigera
ENSSDUG00000005280	rnaseh2a	99	60.137	ENSCSAG00000006567	RNASEH2A	94	60.137	Chlorocebus_sabaeus
ENSSDUG00000005280	rnaseh2a	100	67.808	ENSCPBG00000023909	RNASEH2A	96	67.808	Chrysemys_picta_bellii
ENSSDUG00000005280	rnaseh2a	96	54.480	ENSCING00000006190	-	96	53.125	Ciona_intestinalis
ENSSDUG00000005280	rnaseh2a	89	55.556	ENSCSAVG00000010904	-	89	55.556	Ciona_savignyi
ENSSDUG00000005280	rnaseh2a	99	60.825	ENSCANG00000027433	RNASEH2A	96	60.274	Colobus_angolensis_palliatus
ENSSDUG00000005280	rnaseh2a	89	66.160	ENSCGRG00001005021	Rnaseh2a	87	66.160	Cricetulus_griseus_chok1gshd
ENSSDUG00000005280	rnaseh2a	89	66.160	ENSCGRG00000016602	Rnaseh2a	93	66.667	Cricetulus_griseus_crigri
ENSSDUG00000005280	rnaseh2a	97	90.106	ENSCSEG00000009842	rnaseh2a	92	90.106	Cynoglossus_semilaevis
ENSSDUG00000005280	rnaseh2a	96	75.357	ENSCVAG00000021203	rnaseh2a	92	75.265	Cyprinodon_variegatus
ENSSDUG00000005280	rnaseh2a	95	87.050	ENSDARG00000018891	rnaseh2a	100	83.099	Danio_rerio
ENSSDUG00000005280	rnaseh2a	80	62.393	ENSDNOG00000036532	RNASEH2A	90	62.393	Dasypus_novemcinctus
ENSSDUG00000005280	rnaseh2a	100	59.589	ENSDORG00000009008	Rnaseh2a	96	59.589	Dipodomys_ordii
ENSSDUG00000005280	rnaseh2a	90	54.307	FBgn0031252	CG13690	76	54.307	Drosophila_melanogaster
ENSSDUG00000005280	rnaseh2a	73	53.991	ENSETEG00000001956	-	100	53.991	Echinops_telfairi
ENSSDUG00000005280	rnaseh2a	82	61.345	ENSEBUG00000003380	rnaseh2a	85	56.884	Eptatretus_burgeri
ENSSDUG00000005280	rnaseh2a	90	64.122	ENSEASG00005004118	RNASEH2A	95	64.122	Equus_asinus_asinus
ENSSDUG00000005280	rnaseh2a	92	62.687	ENSECAG00000007013	RNASEH2A	90	62.687	Equus_caballus
ENSSDUG00000005280	rnaseh2a	96	58.719	ENSEEUG00000008222	RNASEH2A	92	58.719	Erinaceus_europaeus
ENSSDUG00000005280	rnaseh2a	100	82.534	ENSELUG00000023079	rnaseh2a	96	79.352	Esox_lucius
ENSSDUG00000005280	rnaseh2a	97	60.284	ENSFCAG00000000474	RNASEH2A	93	60.284	Felis_catus
ENSSDUG00000005280	rnaseh2a	100	59.727	ENSFDAG00000003595	RNASEH2A	96	64.800	Fukomys_damarensis
ENSSDUG00000005280	rnaseh2a	97	89.716	ENSFHEG00000007682	rnaseh2a	94	88.850	Fundulus_heteroclitus
ENSSDUG00000005280	rnaseh2a	100	80.479	ENSGMOG00000005650	rnaseh2a	94	82.007	Gadus_morhua
ENSSDUG00000005280	rnaseh2a	97	60.777	ENSGALG00000052002	RNASEH2A	68	60.777	Gallus_gallus
ENSSDUG00000005280	rnaseh2a	97	88.652	ENSGAFG00000009624	rnaseh2a	93	88.380	Gambusia_affinis
ENSSDUG00000005280	rnaseh2a	97	89.437	ENSGACG00000016019	rnaseh2a	93	89.437	Gasterosteus_aculeatus
ENSSDUG00000005280	rnaseh2a	100	67.466	ENSGAGG00000013859	RNASEH2A	96	67.466	Gopherus_agassizii
ENSSDUG00000005280	rnaseh2a	99	60.137	ENSGGOG00000005846	RNASEH2A	94	60.137	Gorilla_gorilla
ENSSDUG00000005280	rnaseh2a	100	87.671	ENSHBUG00000005267	rnaseh2a	100	87.671	Haplochromis_burtoni
ENSSDUG00000005280	rnaseh2a	100	58.362	ENSHGLG00000018801	RNASEH2A	96	58.362	Heterocephalus_glaber_female
ENSSDUG00000005280	rnaseh2a	100	58.703	ENSHGLG00100015773	RNASEH2A	96	58.703	Heterocephalus_glaber_male
ENSSDUG00000005280	rnaseh2a	97	85.159	ENSHCOG00000016593	rnaseh2a	94	84.429	Hippocampus_comes
ENSSDUG00000005280	rnaseh2a	98	83.566	ENSIPUG00000024299	rnaseh2a	92	84.698	Ictalurus_punctatus
ENSSDUG00000005280	rnaseh2a	99	60.481	ENSSTOG00000006224	RNASEH2A	99	66.275	Ictidomys_tridecemlineatus
ENSSDUG00000005280	rnaseh2a	99	61.644	ENSJJAG00000017547	Rnaseh2a	90	66.667	Jaculus_jaculus
ENSSDUG00000005280	rnaseh2a	97	87.279	ENSKMAG00000019829	rnaseh2a	93	87.324	Kryptolebias_marmoratus
ENSSDUG00000005280	rnaseh2a	99	85.862	ENSLBEG00000020494	rnaseh2a	95	84.983	Labrus_bergylta
ENSSDUG00000005280	rnaseh2a	87	65.882	ENSLACG00000007789	RNASEH2A	99	65.882	Latimeria_chalumnae
ENSSDUG00000005280	rnaseh2a	100	78.767	ENSLOCG00000007890	rnaseh2a	95	78.767	Lepisosteus_oculatus
ENSSDUG00000005280	rnaseh2a	95	61.871	ENSLAFG00000015571	RNASEH2A	92	61.871	Loxodonta_africana
ENSSDUG00000005280	rnaseh2a	99	60.137	ENSMFAG00000002011	RNASEH2A	94	60.137	Macaca_fascicularis
ENSSDUG00000005280	rnaseh2a	99	59.794	ENSMMUG00000005690	RNASEH2A	94	59.794	Macaca_mulatta
ENSSDUG00000005280	rnaseh2a	99	60.137	ENSMNEG00000033054	RNASEH2A	94	60.137	Macaca_nemestrina
ENSSDUG00000005280	rnaseh2a	99	60.137	ENSMLEG00000043654	RNASEH2A	94	60.137	Mandrillus_leucophaeus
ENSSDUG00000005280	rnaseh2a	98	89.510	ENSMAMG00000003062	rnaseh2a	100	89.510	Mastacembelus_armatus
ENSSDUG00000005280	rnaseh2a	100	84.932	ENSMZEG00005023857	rnaseh2a	95	84.932	Maylandia_zebra
ENSSDUG00000005280	rnaseh2a	51	58.553	ENSMAUG00000021740	-	90	58.553	Mesocricetus_auratus
ENSSDUG00000005280	rnaseh2a	100	58.904	ENSMICG00000016430	RNASEH2A	96	58.904	Microcebus_murinus
ENSSDUG00000005280	rnaseh2a	95	63.214	ENSMOCG00000017408	Rnaseh2a	91	63.214	Microtus_ochrogaster
ENSSDUG00000005280	rnaseh2a	87	87.451	ENSMMOG00000008447	rnaseh2a	100	87.451	Mola_mola
ENSSDUG00000005280	rnaseh2a	96	68.440	ENSMODG00000006997	RNASEH2A	92	68.440	Monodelphis_domestica
ENSSDUG00000005280	rnaseh2a	100	88.014	ENSMALG00000021607	rnaseh2a	95	88.014	Monopterus_albus
ENSSDUG00000005280	rnaseh2a	100	43.098	MGP_CAROLIEiJ_G0031319	-	100	66.667	Mus_caroli
ENSSDUG00000005280	rnaseh2a	100	60.884	ENSMUSG00000052926	Rnaseh2a	100	66.667	Mus_musculus
ENSSDUG00000005280	rnaseh2a	90	65.283	MGP_PahariEiJ_G0022924	Rnaseh2a	100	66.667	Mus_pahari
ENSSDUG00000005280	rnaseh2a	100	61.224	MGP_SPRETEiJ_G0032438	Rnaseh2a	100	66.667	Mus_spretus
ENSSDUG00000005280	rnaseh2a	96	62.278	ENSMPUG00000004586	RNASEH2A	92	62.278	Mustela_putorius_furo
ENSSDUG00000005280	rnaseh2a	97	60.777	ENSMLUG00000012723	RNASEH2A	95	59.862	Myotis_lucifugus
ENSSDUG00000005280	rnaseh2a	95	62.950	ENSNGAG00000017988	Rnaseh2a	91	62.950	Nannospalax_galili
ENSSDUG00000005280	rnaseh2a	99	86.505	ENSNBRG00000018731	rnaseh2a	94	86.505	Neolamprologus_brichardi
ENSSDUG00000005280	rnaseh2a	99	60.481	ENSNLEG00000012806	RNASEH2A	94	60.481	Nomascus_leucogenys
ENSSDUG00000005280	rnaseh2a	73	72.300	ENSMEUG00000006001	RNASEH2A	100	72.300	Notamacropus_eugenii
ENSSDUG00000005280	rnaseh2a	95	49.281	ENSOPRG00000004811	RNASEH2A	91	49.281	Ochotona_princeps
ENSSDUG00000005280	rnaseh2a	99	60.345	ENSODEG00000009772	RNASEH2A	90	65.490	Octodon_degus
ENSSDUG00000005280	rnaseh2a	99	86.159	ENSONIG00000018033	rnaseh2a	93	86.159	Oreochromis_niloticus
ENSSDUG00000005280	rnaseh2a	97	62.898	ENSOANG00000009079	RNASEH2A	95	62.284	Ornithorhynchus_anatinus
ENSSDUG00000005280	rnaseh2a	99	86.806	ENSORLG00000004042	rnaseh2a	94	86.806	Oryzias_latipes
ENSSDUG00000005280	rnaseh2a	97	87.943	ENSORLG00020009483	rnaseh2a	92	87.943	Oryzias_latipes_hni
ENSSDUG00000005280	rnaseh2a	97	87.986	ENSORLG00015007548	rnaseh2a	92	87.986	Oryzias_latipes_hsok
ENSSDUG00000005280	rnaseh2a	99	84.375	ENSOMEG00000016454	rnaseh2a	96	84.739	Oryzias_melastigma
ENSSDUG00000005280	rnaseh2a	95	61.151	ENSOGAG00000012214	RNASEH2A	91	61.151	Otolemur_garnettii
ENSSDUG00000005280	rnaseh2a	96	62.278	ENSOARG00000010721	RNASEH2A	95	61.246	Ovis_aries
ENSSDUG00000005280	rnaseh2a	99	60.137	ENSPPAG00000028092	RNASEH2A	94	60.137	Pan_paniscus
ENSSDUG00000005280	rnaseh2a	97	60.284	ENSPPRG00000010585	RNASEH2A	93	60.284	Panthera_pardus
ENSSDUG00000005280	rnaseh2a	97	59.574	ENSPTIG00000013366	RNASEH2A	93	59.574	Panthera_tigris_altaica
ENSSDUG00000005280	rnaseh2a	99	59.794	ENSPTRG00000010542	RNASEH2A	94	59.794	Pan_troglodytes
ENSSDUG00000005280	rnaseh2a	99	60.137	ENSPANG00000034495	RNASEH2A	94	60.137	Papio_anubis
ENSSDUG00000005280	rnaseh2a	98	82.105	ENSPKIG00000009756	rnaseh2a	95	81.533	Paramormyrops_kingsleyae
ENSSDUG00000005280	rnaseh2a	64	70.053	ENSPSIG00000012039	RNASEH2A	93	70.053	Pelodiscus_sinensis
ENSSDUG00000005280	rnaseh2a	87	85.490	ENSPMGG00000023392	rnaseh2a	100	85.490	Periophthalmus_magnuspinnatus
ENSSDUG00000005280	rnaseh2a	95	63.571	ENSPEMG00000018009	Rnaseh2a	91	63.571	Peromyscus_maniculatus_bairdii
ENSSDUG00000005280	rnaseh2a	87	66.538	ENSPMAG00000009060	rnaseh2a	95	62.838	Petromyzon_marinus
ENSSDUG00000005280	rnaseh2a	96	69.366	ENSPCIG00000014119	RNASEH2A	93	69.366	Phascolarctos_cinereus
ENSSDUG00000005280	rnaseh2a	97	89.362	ENSPFOG00000012627	rnaseh2a	93	85.965	Poecilia_formosa
ENSSDUG00000005280	rnaseh2a	87	89.412	ENSPLAG00000015901	rnaseh2a	100	89.412	Poecilia_latipinna
ENSSDUG00000005280	rnaseh2a	63	89.617	ENSPLAG00000018723	-	81	89.189	Poecilia_latipinna
ENSSDUG00000005280	rnaseh2a	87	89.020	ENSPMEG00000000647	rnaseh2a	100	89.020	Poecilia_mexicana
ENSSDUG00000005280	rnaseh2a	63	89.071	ENSPMEG00000009032	-	84	88.649	Poecilia_mexicana
ENSSDUG00000005280	rnaseh2a	97	86.525	ENSPREG00000015015	rnaseh2a	93	86.268	Poecilia_reticulata
ENSSDUG00000005280	rnaseh2a	99	59.589	ENSPPYG00000009608	RNASEH2A	94	59.589	Pongo_abelii
ENSSDUG00000005280	rnaseh2a	95	62.230	ENSPCAG00000015319	RNASEH2A	92	62.230	Procavia_capensis
ENSSDUG00000005280	rnaseh2a	100	58.562	ENSPCOG00000003686	RNASEH2A	96	58.562	Propithecus_coquereli
ENSSDUG00000005280	rnaseh2a	99	47.766	ENSPVAG00000014703	RNASEH2A	95	47.766	Pteropus_vampyrus
ENSSDUG00000005280	rnaseh2a	99	78.694	ENSPNYG00000023986	rnaseh2a	94	78.694	Pundamilia_nyererei
ENSSDUG00000005280	rnaseh2a	100	83.904	ENSPNAG00000021017	rnaseh2a	94	83.904	Pygocentrus_nattereri
ENSSDUG00000005280	rnaseh2a	90	64.906	ENSRNOG00000003504	Rnaseh2a	88	64.906	Rattus_norvegicus
ENSSDUG00000005280	rnaseh2a	99	60.825	ENSRBIG00000023554	RNASEH2A	94	60.825	Rhinopithecus_bieti
ENSSDUG00000005280	rnaseh2a	99	60.825	ENSRROG00000043799	RNASEH2A	94	60.825	Rhinopithecus_roxellana
ENSSDUG00000005280	rnaseh2a	85	40.154	YNL072W	RNH201	83	40.154	Saccharomyces_cerevisiae
ENSSDUG00000005280	rnaseh2a	88	64.591	ENSSBOG00000033164	RNASEH2A	86	64.591	Saimiri_boliviensis_boliviensis
ENSSDUG00000005280	rnaseh2a	96	67.958	ENSSHAG00000015552	RNASEH2A	92	67.958	Sarcophilus_harrisii
ENSSDUG00000005280	rnaseh2a	100	82.192	ENSSFOG00015009692	rnaseh2a	96	82.192	Scleropages_formosus
ENSSDUG00000005280	rnaseh2a	100	92.123	ENSSMAG00000013986	rnaseh2a	100	92.123	Scophthalmus_maximus
ENSSDUG00000005280	rnaseh2a	97	98.940	ENSSLDG00000023766	rnaseh2a	92	98.944	Seriola_lalandi_dorsalis
ENSSDUG00000005280	rnaseh2a	97	91.166	ENSSPAG00000012769	rnaseh2a	92	91.197	Stegastes_partitus
ENSSDUG00000005280	rnaseh2a	96	61.210	ENSSSCG00000013737	RNASEH2A	92	61.210	Sus_scrofa
ENSSDUG00000005280	rnaseh2a	99	83.849	ENSTRUG00000000049	rnaseh2a	94	83.849	Takifugu_rubripes
ENSSDUG00000005280	rnaseh2a	97	84.752	ENSTNIG00000004533	rnaseh2a	91	84.752	Tetraodon_nigroviridis
ENSSDUG00000005280	rnaseh2a	73	66.197	ENSTTRG00000003592	RNASEH2A	100	66.197	Tursiops_truncatus
ENSSDUG00000005280	rnaseh2a	95	61.871	ENSUAMG00000019593	RNASEH2A	99	61.429	Ursus_americanus
ENSSDUG00000005280	rnaseh2a	79	66.379	ENSUMAG00000006254	-	73	66.379	Ursus_maritimus
ENSSDUG00000005280	rnaseh2a	96	70.714	ENSXETG00000004762	rnaseh2a	91	70.714	Xenopus_tropicalis
ENSSDUG00000005280	rnaseh2a	99	86.552	ENSXCOG00000013485	rnaseh2a	96	85.959	Xiphophorus_couchianus
ENSSDUG00000005280	rnaseh2a	97	88.298	ENSXMAG00000006953	rnaseh2a	93	88.028	Xiphophorus_maculatus