EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000005391 (Gene tree)
Gene ID: 111216846
Gene Symbol: tsen34
Alias: si:ch211-203b8.3
Full Name: tRNA splicing endonuclease subunit 34
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 5512 bases
Position: chrBDQW01000036.1:4083014-4088525
Accession: 111216846
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000007338	tRNA_int_endo	PF01974.17	2.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000007477	-	2181	XM_022738472	ENSSDUP00000007338	301 (aa)	XP_022594193	UPI000BBEDAF8

Gene Model

Click here to download ENSSDUG00000005391's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000005391's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000005391	tsen34	91	39.355	ENSG00000170892	TSEN34	99	39.677	Homo_sapiens
ENSSDUG00000005391	tsen34	98	74.490	ENSAPOG00000001248	tsen34	96	76.429	Acanthochromis_polyacanthus
ENSSDUG00000005391	tsen34	92	73.188	ENSAPOG00000012557	-	88	75.285	Acanthochromis_polyacanthus
ENSSDUG00000005391	tsen34	92	74.007	ENSAPOG00000008579	-	95	76.046	Acanthochromis_polyacanthus
ENSSDUG00000005391	tsen34	84	39.931	ENSAMEG00000004585	TSEN34	100	39.931	Ailuropoda_melanoleuca
ENSSDUG00000005391	tsen34	99	73.510	ENSACIG00000007110	tsen34	88	75.357	Amphilophus_citrinellus
ENSSDUG00000005391	tsen34	98	75.170	ENSAOCG00000006905	tsen34	96	77.500	Amphiprion_ocellaris
ENSSDUG00000005391	tsen34	98	74.830	ENSAPEG00000019171	tsen34	96	77.143	Amphiprion_percula
ENSSDUG00000005391	tsen34	96	75.087	ENSATEG00000019800	tsen34	98	76.842	Anabas_testudineus
ENSSDUG00000005391	tsen34	92	40.193	ENSACAG00000016189	TSEN34	99	40.323	Anolis_carolinensis
ENSSDUG00000005391	tsen34	91	38.636	ENSANAG00000026113	TSEN34	99	40.000	Aotus_nancymaae
ENSSDUG00000005391	tsen34	92	72.202	ENSACLG00000009661	tsen34	92	73.646	Astatotilapia_calliptera
ENSSDUG00000005391	tsen34	92	55.516	ENSAMXG00000017568	tsen34	87	55.516	Astyanax_mexicanus
ENSSDUG00000005391	tsen34	91	38.264	ENSBTAG00000006486	TSEN34	99	38.264	Bos_taurus
ENSSDUG00000005391	tsen34	91	40.878	ENSCJAG00000001128	TSEN34	99	40.878	Callithrix_jacchus
ENSSDUG00000005391	tsen34	91	38.462	ENSCAFG00000002675	TSEN34	99	38.462	Canis_familiaris
ENSSDUG00000005391	tsen34	91	38.387	ENSCAFG00020018350	TSEN34	96	40.397	Canis_lupus_dingo
ENSSDUG00000005391	tsen34	91	41.639	ENSCHIG00000020705	TSEN34	99	41.639	Capra_hircus
ENSSDUG00000005391	tsen34	87	39.865	ENSTSYG00000028200	TSEN34	95	39.865	Carlito_syrichta
ENSSDUG00000005391	tsen34	63	43.564	ENSCAPG00000012811	-	99	43.564	Cavia_aperea
ENSSDUG00000005391	tsen34	91	39.130	ENSCPOG00000012672	TSEN34	99	41.667	Cavia_porcellus
ENSSDUG00000005391	tsen34	91	39.159	ENSCCAG00000036023	TSEN34	99	40.645	Cebus_capucinus
ENSSDUG00000005391	tsen34	89	38.487	ENSCATG00000033390	TSEN34	95	38.487	Cercocebus_atys
ENSSDUG00000005391	tsen34	91	39.203	ENSCLAG00000000618	TSEN34	99	42.244	Chinchilla_lanigera
ENSSDUG00000005391	tsen34	91	39.355	ENSCSAG00000001891	TSEN34	99	39.355	Chlorocebus_sabaeus
ENSSDUG00000005391	tsen34	91	39.355	ENSCANG00000040984	TSEN34	99	39.677	Colobus_angolensis_palliatus
ENSSDUG00000005391	tsen34	91	37.700	ENSCGRG00001006296	Tsen34	99	39.048	Cricetulus_griseus_chok1gshd
ENSSDUG00000005391	tsen34	95	70.280	ENSCSEG00000006278	tsen34	91	70.968	Cynoglossus_semilaevis
ENSSDUG00000005391	tsen34	96	52.234	ENSDARG00000061370	tsen34	89	51.418	Danio_rerio
ENSSDUG00000005391	tsen34	91	37.419	ENSDNOG00000039332	TSEN34	99	35.484	Dasypus_novemcinctus
ENSSDUG00000005391	tsen34	91	39.016	ENSDORG00000029071	Tsen34	99	39.016	Dipodomys_ordii
ENSSDUG00000005391	tsen34	91	39.677	ENSEASG00005021580	TSEN34	99	39.677	Equus_asinus_asinus
ENSSDUG00000005391	tsen34	96	38.532	ENSECAG00000019651	TSEN34	85	40.000	Equus_caballus
ENSSDUG00000005391	tsen34	50	35.326	ENSEEUG00000005692	TSEN34	65	35.326	Erinaceus_europaeus
ENSSDUG00000005391	tsen34	92	56.383	ENSELUG00000006262	tsen34	92	56.184	Esox_lucius
ENSSDUG00000005391	tsen34	91	40.645	ENSFCAG00000014045	TSEN34	99	39.677	Felis_catus
ENSSDUG00000005391	tsen34	55	47.904	ENSFDAG00000017995	TSEN34	92	40.833	Fukomys_damarensis
ENSSDUG00000005391	tsen34	100	72.093	ENSFHEG00000008791	tsen34	100	73.422	Fundulus_heteroclitus
ENSSDUG00000005391	tsen34	69	61.058	ENSGMOG00000001961	tsen34	99	61.058	Gadus_morhua
ENSSDUG00000005391	tsen34	95	73.077	ENSGAFG00000016880	tsen34	97	73.239	Gambusia_affinis
ENSSDUG00000005391	tsen34	92	66.221	ENSGACG00000004800	tsen34	99	65.886	Gasterosteus_aculeatus
ENSSDUG00000005391	tsen34	93	43.056	ENSGAGG00000008982	TSEN34	73	43.056	Gopherus_agassizii
ENSSDUG00000005391	tsen34	91	39.355	ENSGGOG00000008197	TSEN34	99	39.677	Gorilla_gorilla
ENSSDUG00000005391	tsen34	92	74.007	ENSHBUG00000016593	tsen34	83	74.007	Haplochromis_burtoni
ENSSDUG00000005391	tsen34	91	39.542	ENSHGLG00000017619	TSEN34	99	39.542	Heterocephalus_glaber_female
ENSSDUG00000005391	tsen34	95	57.292	ENSHCOG00000001368	tsen34	97	57.746	Hippocampus_comes
ENSSDUG00000005391	tsen34	95	52.203	ENSIPUG00000008359	tsen34	89	52.595	Ictalurus_punctatus
ENSSDUG00000005391	tsen34	88	37.209	ENSSTOG00000023816	TSEN34	96	39.073	Ictidomys_tridecemlineatus
ENSSDUG00000005391	tsen34	91	37.898	ENSJJAG00000016301	Tsen34	99	37.898	Jaculus_jaculus
ENSSDUG00000005391	tsen34	93	75.089	ENSKMAG00000007181	tsen34	87	75.089	Kryptolebias_marmoratus
ENSSDUG00000005391	tsen34	100	74.419	ENSLBEG00000015001	tsen34	100	74.419	Labrus_bergylta
ENSSDUG00000005391	tsen34	64	38.983	ENSLACG00000013346	-	98	38.983	Latimeria_chalumnae
ENSSDUG00000005391	tsen34	91	56.115	ENSLOCG00000001887	tsen34	97	56.115	Lepisosteus_oculatus
ENSSDUG00000005391	tsen34	91	39.241	ENSLAFG00000015215	TSEN34	99	39.241	Loxodonta_africana
ENSSDUG00000005391	tsen34	91	40.645	ENSMFAG00000044825	TSEN34	99	40.645	Macaca_fascicularis
ENSSDUG00000005391	tsen34	91	40.645	ENSMMUG00000016571	TSEN34	99	40.645	Macaca_mulatta
ENSSDUG00000005391	tsen34	91	40.645	ENSMNEG00000045457	TSEN34	99	40.645	Macaca_nemestrina
ENSSDUG00000005391	tsen34	59	41.589	ENSMLEG00000034295	TSEN34	80	41.589	Mandrillus_leucophaeus
ENSSDUG00000005391	tsen34	96	77.083	ENSMAMG00000018407	tsen34	98	77.113	Mastacembelus_armatus
ENSSDUG00000005391	tsen34	100	70.432	ENSMZEG00005002313	tsen34	93	74.101	Maylandia_zebra
ENSSDUG00000005391	tsen34	84	32.877	ENSMAUG00000019716	Tsen34	88	33.788	Mesocricetus_auratus
ENSSDUG00000005391	tsen34	91	39.355	ENSMICG00000002409	TSEN34	99	39.355	Microcebus_murinus
ENSSDUG00000005391	tsen34	91	36.991	ENSMOCG00000022190	Tsen34	99	38.365	Microtus_ochrogaster
ENSSDUG00000005391	tsen34	97	69.716	ENSMMOG00000009551	tsen34	96	70.722	Mola_mola
ENSSDUG00000005391	tsen34	89	41.077	ENSMODG00000003984	-	74	43.098	Monodelphis_domestica
ENSSDUG00000005391	tsen34	98	72.449	ENSMALG00000018918	tsen34	96	74.468	Monopterus_albus
ENSSDUG00000005391	tsen34	91	39.490	MGP_CAROLIEiJ_G0029099	Tsen34	99	39.490	Mus_caroli
ENSSDUG00000005391	tsen34	91	39.365	ENSMUSG00000035585	Tsen34	99	38.782	Mus_musculus
ENSSDUG00000005391	tsen34	91	39.297	MGP_PahariEiJ_G0020968	Tsen34	99	39.297	Mus_pahari
ENSSDUG00000005391	tsen34	91	39.365	MGP_SPRETEiJ_G0030152	Tsen34	99	39.365	Mus_spretus
ENSSDUG00000005391	tsen34	91	37.097	ENSMPUG00000010373	TSEN34	99	39.809	Mustela_putorius_furo
ENSSDUG00000005391	tsen34	91	39.550	ENSMLUG00000016894	TSEN34	99	39.550	Myotis_lucifugus
ENSSDUG00000005391	tsen34	78	33.824	ENSNGAG00000016187	Tsen34	97	33.824	Nannospalax_galili
ENSSDUG00000005391	tsen34	97	70.134	ENSNBRG00000008640	tsen34	98	73.022	Neolamprologus_brichardi
ENSSDUG00000005391	tsen34	91	40.132	ENSNLEG00000006309	TSEN34	99	39.803	Nomascus_leucogenys
ENSSDUG00000005391	tsen34	88	48.881	ENSMEUG00000002978	TSEN34	96	48.881	Notamacropus_eugenii
ENSSDUG00000005391	tsen34	91	38.994	ENSODEG00000000096	TSEN34	99	38.994	Octodon_degus
ENSSDUG00000005391	tsen34	92	75.180	ENSONIG00000017253	tsen34	99	75.180	Oreochromis_niloticus
ENSSDUG00000005391	tsen34	65	40.693	ENSOANG00000014747	-	97	40.693	Ornithorhynchus_anatinus
ENSSDUG00000005391	tsen34	96	66.319	ENSORLG00015012740	tsen34	95	67.500	Oryzias_latipes_hsok
ENSSDUG00000005391	tsen34	95	68.641	ENSOMEG00000016771	tsen34	94	69.643	Oryzias_melastigma
ENSSDUG00000005391	tsen34	91	41.613	ENSOGAG00000006966	TSEN34	99	41.613	Otolemur_garnettii
ENSSDUG00000005391	tsen34	74	37.452	ENSOARG00000002763	TSEN34	95	38.596	Ovis_aries
ENSSDUG00000005391	tsen34	91	39.677	ENSPPAG00000036935	TSEN34	99	40.000	Pan_paniscus
ENSSDUG00000005391	tsen34	91	40.645	ENSPPRG00000011779	TSEN34	99	39.677	Panthera_pardus
ENSSDUG00000005391	tsen34	91	39.355	ENSPTRG00000044768	-	99	39.677	Pan_troglodytes
ENSSDUG00000005391	tsen34	91	39.355	ENSPTRG00000011448	TSEN34	99	39.677	Pan_troglodytes
ENSSDUG00000005391	tsen34	91	38.710	ENSPANG00000012101	TSEN34	99	39.677	Papio_anubis
ENSSDUG00000005391	tsen34	92	55.556	ENSPKIG00000014674	tsen34	94	55.556	Paramormyrops_kingsleyae
ENSSDUG00000005391	tsen34	91	39.228	ENSPEMG00000014535	Tsen34	99	39.228	Peromyscus_maniculatus_bairdii
ENSSDUG00000005391	tsen34	95	73.427	ENSPFOG00000008679	tsen34	97	74.648	Poecilia_formosa
ENSSDUG00000005391	tsen34	95	74.476	ENSPLAG00000017309	tsen34	97	75.704	Poecilia_latipinna
ENSSDUG00000005391	tsen34	95	73.427	ENSPMEG00000005235	tsen34	97	74.648	Poecilia_mexicana
ENSSDUG00000005391	tsen34	97	71.478	ENSPREG00000021784	tsen34	96	72.535	Poecilia_reticulata
ENSSDUG00000005391	tsen34	93	39.241	ENSPPYG00000010376	TSEN34	96	39.241	Pongo_abelii
ENSSDUG00000005391	tsen34	91	39.355	ENSPCAG00000012359	TSEN34	99	38.710	Procavia_capensis
ENSSDUG00000005391	tsen34	91	39.355	ENSPCOG00000013843	TSEN34	99	40.645	Propithecus_coquereli
ENSSDUG00000005391	tsen34	91	40.196	ENSPVAG00000015570	TSEN34	99	40.196	Pteropus_vampyrus
ENSSDUG00000005391	tsen34	100	70.100	ENSPNYG00000024090	tsen34	73	74.007	Pundamilia_nyererei
ENSSDUG00000005391	tsen34	98	51.974	ENSPNAG00000028698	tsen34	87	53.333	Pygocentrus_nattereri
ENSSDUG00000005391	tsen34	91	39.365	ENSRNOG00000055179	Tsen34	99	39.365	Rattus_norvegicus
ENSSDUG00000005391	tsen34	91	39.365	ENSRNOG00000059572	Tsen34l1	99	39.365	Rattus_norvegicus
ENSSDUG00000005391	tsen34	91	40.323	ENSRBIG00000034430	TSEN34	99	40.323	Rhinopithecus_bieti
ENSSDUG00000005391	tsen34	91	38.710	ENSRROG00000024217	TSEN34	99	39.677	Rhinopithecus_roxellana
ENSSDUG00000005391	tsen34	87	37.838	ENSSBOG00000016017	TSEN34	96	38.384	Saimiri_boliviensis_boliviensis
ENSSDUG00000005391	tsen34	65	56.061	ENSSFOG00015017579	tsen34	82	56.061	Scleropages_formosus
ENSSDUG00000005391	tsen34	95	72.378	ENSSMAG00000005214	tsen34	99	72.535	Scophthalmus_maximus
ENSSDUG00000005391	tsen34	99	97.333	ENSSLDG00000006144	tsen34	96	97.333	Seriola_lalandi_dorsalis
ENSSDUG00000005391	tsen34	77	37.226	ENSSARG00000005857	TSEN34	69	37.313	Sorex_araneus
ENSSDUG00000005391	tsen34	92	39.310	ENSSPUG00000008447	TSEN34	99	39.310	Sphenodon_punctatus
ENSSDUG00000005391	tsen34	97	75.342	ENSSPAG00000010512	tsen34	94	76.344	Stegastes_partitus
ENSSDUG00000005391	tsen34	93	38.750	ENSSSCG00000003268	TSEN34	99	38.907	Sus_scrofa
ENSSDUG00000005391	tsen34	92	58.696	ENSTRUG00000000787	tsen34	89	59.058	Takifugu_rubripes
ENSSDUG00000005391	tsen34	92	64.948	ENSTNIG00000001937	-	100	65.529	Tetraodon_nigroviridis
ENSSDUG00000005391	tsen34	92	64.765	ENSTNIG00000011201	tsen34	100	65.886	Tetraodon_nigroviridis
ENSSDUG00000005391	tsen34	91	38.387	ENSTTRG00000006571	TSEN34	99	38.387	Tursiops_truncatus
ENSSDUG00000005391	tsen34	91	38.387	ENSUAMG00000008701	TSEN34	96	39.735	Ursus_americanus
ENSSDUG00000005391	tsen34	91	37.419	ENSVVUG00000008211	TSEN34	96	40.397	Vulpes_vulpes
ENSSDUG00000005391	tsen34	92	40.268	ENSXETG00000004597	tsen34	99	40.268	Xenopus_tropicalis
ENSSDUG00000005391	tsen34	95	74.126	ENSXMAG00000024266	tsen34	97	74.296	Xiphophorus_maculatus