EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSDUG00000005401 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Seriola_dumerili
Status
putative
Strand
Plus strand
Length
10616 bases
Position
chrBDQW01000383.1:582641-593256
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSDUP00000007753zf-C2H2PF00096.268.6e-69113
ENSSDUP00000007753zf-C2H2PF00096.268.6e-69213
ENSSDUP00000007753zf-C2H2PF00096.268.6e-69313
ENSSDUP00000007753zf-C2H2PF00096.268.6e-69413
ENSSDUP00000007753zf-C2H2PF00096.268.6e-69513
ENSSDUP00000007753zf-C2H2PF00096.268.6e-69613
ENSSDUP00000007753zf-C2H2PF00096.268.6e-69713
ENSSDUP00000007753zf-C2H2PF00096.268.6e-69813
ENSSDUP00000007753zf-C2H2PF00096.268.6e-69913
ENSSDUP00000007753zf-C2H2PF00096.268.6e-691013
ENSSDUP00000007753zf-C2H2PF00096.268.6e-691113
ENSSDUP00000007753zf-C2H2PF00096.268.6e-691213
ENSSDUP00000007753zf-C2H2PF00096.268.6e-691313
ENSSDUP00000008643zf-C2H2PF00096.263.7e-66111
ENSSDUP00000008643zf-C2H2PF00096.263.7e-66211
ENSSDUP00000008643zf-C2H2PF00096.263.7e-66311
ENSSDUP00000008643zf-C2H2PF00096.263.7e-66411
ENSSDUP00000008643zf-C2H2PF00096.263.7e-66511
ENSSDUP00000008643zf-C2H2PF00096.263.7e-66611
ENSSDUP00000008643zf-C2H2PF00096.263.7e-66711
ENSSDUP00000008643zf-C2H2PF00096.263.7e-66811
ENSSDUP00000008643zf-C2H2PF00096.263.7e-66911
ENSSDUP00000008643zf-C2H2PF00096.263.7e-661011
ENSSDUP00000008643zf-C2H2PF00096.263.7e-661111
ENSSDUP00000007546zf-C2H2PF00096.261e-65112
ENSSDUP00000007546zf-C2H2PF00096.261e-65212
ENSSDUP00000007546zf-C2H2PF00096.261e-65312
ENSSDUP00000007546zf-C2H2PF00096.261e-65412
ENSSDUP00000007546zf-C2H2PF00096.261e-65512
ENSSDUP00000007546zf-C2H2PF00096.261e-65612
ENSSDUP00000007546zf-C2H2PF00096.261e-65712
ENSSDUP00000007546zf-C2H2PF00096.261e-65812
ENSSDUP00000007546zf-C2H2PF00096.261e-65912
ENSSDUP00000007546zf-C2H2PF00096.261e-651012
ENSSDUP00000007546zf-C2H2PF00096.261e-651112
ENSSDUP00000007546zf-C2H2PF00096.261e-651212
ENSSDUP00000007901zf-C2H2PF00096.261.2e-56110
ENSSDUP00000007901zf-C2H2PF00096.261.2e-56210
ENSSDUP00000007901zf-C2H2PF00096.261.2e-56310
ENSSDUP00000007901zf-C2H2PF00096.261.2e-56410
ENSSDUP00000007901zf-C2H2PF00096.261.2e-56510
ENSSDUP00000007901zf-C2H2PF00096.261.2e-56610
ENSSDUP00000007901zf-C2H2PF00096.261.2e-56710
ENSSDUP00000007901zf-C2H2PF00096.261.2e-56810
ENSSDUP00000007901zf-C2H2PF00096.261.2e-56910
ENSSDUP00000007901zf-C2H2PF00096.261.2e-561010
ENSSDUP00000007991zf-C2H2PF00096.262e-56110
ENSSDUP00000007991zf-C2H2PF00096.262e-56210
ENSSDUP00000007991zf-C2H2PF00096.262e-56310
ENSSDUP00000007991zf-C2H2PF00096.262e-56410
ENSSDUP00000007991zf-C2H2PF00096.262e-56510
ENSSDUP00000007991zf-C2H2PF00096.262e-56610
ENSSDUP00000007991zf-C2H2PF00096.262e-56710
ENSSDUP00000007991zf-C2H2PF00096.262e-56810
ENSSDUP00000007991zf-C2H2PF00096.262e-56910
ENSSDUP00000007991zf-C2H2PF00096.262e-561010
ENSSDUP00000008298zf-C2H2PF00096.261e-5519
ENSSDUP00000008298zf-C2H2PF00096.261e-5529
ENSSDUP00000008298zf-C2H2PF00096.261e-5539
ENSSDUP00000008298zf-C2H2PF00096.261e-5549
ENSSDUP00000008298zf-C2H2PF00096.261e-5559
ENSSDUP00000008298zf-C2H2PF00096.261e-5569
ENSSDUP00000008298zf-C2H2PF00096.261e-5579
ENSSDUP00000008298zf-C2H2PF00096.261e-5589
ENSSDUP00000008298zf-C2H2PF00096.261e-5599
ENSSDUP00000008557zf-C2H2PF00096.264.6e-54110
ENSSDUP00000008557zf-C2H2PF00096.264.6e-54210
ENSSDUP00000008557zf-C2H2PF00096.264.6e-54310
ENSSDUP00000008557zf-C2H2PF00096.264.6e-54410
ENSSDUP00000008557zf-C2H2PF00096.264.6e-54510
ENSSDUP00000008557zf-C2H2PF00096.264.6e-54610
ENSSDUP00000008557zf-C2H2PF00096.264.6e-54710
ENSSDUP00000008557zf-C2H2PF00096.264.6e-54810
ENSSDUP00000008557zf-C2H2PF00096.264.6e-54910
ENSSDUP00000008557zf-C2H2PF00096.264.6e-541010
ENSSDUP00000007753zf-metPF12874.78.3e-2614
ENSSDUP00000007753zf-metPF12874.78.3e-2624
ENSSDUP00000007753zf-metPF12874.78.3e-2634
ENSSDUP00000007753zf-metPF12874.78.3e-2644
ENSSDUP00000007546zf-metPF12874.73.4e-2312
ENSSDUP00000007546zf-metPF12874.73.4e-2322
ENSSDUP00000008643zf-metPF12874.71.7e-2015
ENSSDUP00000008643zf-metPF12874.71.7e-2025
ENSSDUP00000008643zf-metPF12874.71.7e-2035
ENSSDUP00000008643zf-metPF12874.71.7e-2045
ENSSDUP00000008643zf-metPF12874.71.7e-2055
ENSSDUP00000008298zf-metPF12874.71.9e-1915
ENSSDUP00000008298zf-metPF12874.71.9e-1925
ENSSDUP00000008298zf-metPF12874.71.9e-1935
ENSSDUP00000008298zf-metPF12874.71.9e-1945
ENSSDUP00000008298zf-metPF12874.71.9e-1955
ENSSDUP00000007991zf-metPF12874.72.2e-1815
ENSSDUP00000007991zf-metPF12874.72.2e-1825
ENSSDUP00000007991zf-metPF12874.72.2e-1835
ENSSDUP00000007991zf-metPF12874.72.2e-1845
ENSSDUP00000007991zf-metPF12874.72.2e-1855
ENSSDUP00000007901zf-metPF12874.71.2e-1515
ENSSDUP00000007901zf-metPF12874.71.2e-1525
ENSSDUP00000007901zf-metPF12874.71.2e-1535
ENSSDUP00000007901zf-metPF12874.71.2e-1545
ENSSDUP00000007901zf-metPF12874.71.2e-1555
ENSSDUP00000008557zf-metPF12874.72.6e-1414
ENSSDUP00000008557zf-metPF12874.72.6e-1424
ENSSDUP00000008557zf-metPF12874.72.6e-1434
ENSSDUP00000008557zf-metPF12874.72.6e-1444
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSDUT00000008809-1263-ENSSDUP00000008643420 (aa)--
ENSSDUT00000008138-1299-ENSSDUP00000007991432 (aa)--
ENSSDUT00000007894-1500-ENSSDUP00000007753499 (aa)--
ENSSDUT00000008448-1110-ENSSDUP00000008298369 (aa)--
ENSSDUT00000008714-1305-ENSSDUP00000008557434 (aa)--
ENSSDUT00000008044-1281-ENSSDUP00000007901426 (aa)--
ENSSDUT00000007685-1419-ENSSDUP00000007546472 (aa)--
Gene Model
Click here to download ENSSDUG00000005401's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000005401's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSDUG00000005401-9145.455ENSSDUG00000018060snai28039.552
ENSSDUG00000005401-8841.818ENSSDUG00000019071-5143.421
ENSSDUG00000005401-8865.193ENSSDUG00000004650-9865.193
ENSSDUG00000005401-9736.545ENSSDUG00000004449zbtb485236.508
ENSSDUG00000005401-9888.889ENSSDUG00000009534-8588.889
ENSSDUG00000005401-9939.033ENSSDUG00000004892-9541.791
ENSSDUG00000005401-9653.191ENSSDUG00000000946-9951.064
ENSSDUG00000005401-9863.830ENSSDUG00000009601-9963.830
ENSSDUG00000005401-8838.760ENSSDUG00000015456-5238.182
ENSSDUG00000005401-9941.964ENSSDUG00000011170znf2367346.377
ENSSDUG00000005401-9968.699ENSSDUG00000009563-9368.699
ENSSDUG00000005401-8553.571ENSSDUG00000002195-9950.602
ENSSDUG00000005401-9744.444ENSSDUG00000004388wt1a5844.444
ENSSDUG00000005401-9147.619ENSSDUG00000020595-9439.113
ENSSDUG00000005401-8055.102ENSSDUG00000020419-8855.102
ENSSDUG00000005401-9157.447ENSSDUG00000000838-8250.350
ENSSDUG00000005401-8648.667ENSSDUG00000002488-6948.667
ENSSDUG00000005401-8838.682ENSSDUG00000000705-6641.751
ENSSDUG00000005401-9547.257ENSSDUG00000020805-9047.257
ENSSDUG00000005401-9746.667ENSSDUG00000013904-9044.255
ENSSDUG00000005401-9544.681ENSSDUG00000011604gfi1b8144.681
ENSSDUG00000005401-9850.174ENSSDUG00000000786-9261.446
ENSSDUG00000005401-9958.667ENSSDUG00000009553-8654.974
ENSSDUG00000005401-9688.372ENSSDUG00000007336-10088.372
ENSSDUG00000005401-9633.910ENSSDUG00000006740-8742.373
ENSSDUG00000005401-8741.284ENSSDUG00000019933snai1a7242.553
ENSSDUG00000005401-9947.959ENSSDUG00000020774-8453.191
ENSSDUG00000005401-9244.000ENSSDUG00000006463-8844.118
ENSSDUG00000005401-8836.697ENSSDUG00000018835PRDM155038.095
ENSSDUG00000005401-9244.667ENSSDUG00000012926-9544.667
ENSSDUG00000005401-8552.830ENSSDUG00000010584sall3b5654.717
ENSSDUG00000005401-9445.685ENSSDUG00000022170zbtb495346.759
ENSSDUG00000005401-8832.646ENSSDUG00000014540znf3415838.983
ENSSDUG00000005401-8949.432ENSSDUG00000011244-9849.650
ENSSDUG00000005401-9950.000ENSSDUG00000019911-8047.222
ENSSDUG00000005401-9459.603ENSSDUG00000015254-9757.576
ENSSDUG00000005401-8441.584ENSSDUG00000001637scrt25141.584
ENSSDUG00000005401-9952.632ENSSDUG00000022035-8352.632
ENSSDUG00000005401-8742.963ENSSDUG00000002174-7141.803
ENSSDUG00000005401-9747.024ENSSDUG00000022914-6547.024
ENSSDUG00000005401-9763.462ENSSDUG00000009439-9962.085
ENSSDUG00000005401-9032.461ENSSDUG00000010783hinfp5232.796
ENSSDUG00000005401-8545.205ENSSDUG00000017250-5345.205
ENSSDUG00000005401-8537.931ENSSDUG00000000871-9539.130
ENSSDUG00000005401-9540.411ENSSDUG00000016734-6641.935
ENSSDUG00000005401-9957.949ENSSDUG00000015622-10056.410
ENSSDUG00000005401-9754.737ENSSDUG00000015191-9757.051
ENSSDUG00000005401-9542.857ENSSDUG00000014574znf5269136.301
ENSSDUG00000005401-9941.056ENSSDUG00000000799-8341.056
ENSSDUG00000005401-9447.244ENSSDUG00000015013-7447.244
ENSSDUG00000005401-9957.534ENSSDUG00000009577-8755.046
ENSSDUG00000005401-9155.363ENSSDUG00000015204-9757.664
ENSSDUG00000005401-9730.065ENSSDUG00000002675znf6469830.065
ENSSDUG00000005401-8453.804ENSSDUG00000001263-9456.934
ENSSDUG00000005401-8642.105ENSSDUG00000022701znf6526037.551
ENSSDUG00000005401-9449.405ENSSDUG00000006808-8647.305
ENSSDUG00000005401-9670.833ENSSDUG00000008682-9972.881
ENSSDUG00000005401-8340.179ENSSDUG00000007752scrt1b5140.179
ENSSDUG00000005401-8544.000ENSSDUG00000000905-6644.000
ENSSDUG00000005401-9740.741ENSSDUG00000022412znf6486740.616
ENSSDUG00000005401-8743.750ENSSDUG00000022410gfi1ab5046.296
ENSSDUG00000005401-9960.071ENSSDUG00000008943-10058.784
ENSSDUG00000005401-8936.190ENSSDUG00000009223zbtb415035.855
ENSSDUG00000005401-9137.069ENSSDUG00000021415si:ch211-216l23.19139.815
ENSSDUG00000005401-8645.283ENSSDUG00000000909-5045.324
ENSSDUG00000005401-9331.892ENSSDUG00000010305-6632.891
ENSSDUG00000005401-9237.394ENSSDUG00000019932ZNF3199739.310
ENSSDUG00000005401-9745.985ENSSDUG00000022162-8644.961
ENSSDUG00000005401-9851.417ENSSDUG00000004835-8951.417
ENSSDUG00000005401-9851.020ENSSDUG00000020810-9647.552
ENSSDUG00000005401-9048.750ENSSDUG00000023764-9548.750
ENSSDUG00000005401-9651.163ENSSDUG00000023765-9451.163
ENSSDUG00000005401-9658.434ENSSDUG00000005323-9266.332
ENSSDUG00000005401-9252.500ENSSDUG00000008329-9152.500
ENSSDUG00000005401-9948.980ENSSDUG00000000748sall1b6748.980
ENSSDUG00000005401-9538.697ENSSDUG00000020397prdm58438.697
ENSSDUG00000005401-9037.778ENSSDUG00000003003znf319b8837.651
ENSSDUG00000005401-9948.402ENSSDUG00000020788-9548.402
ENSSDUG00000005401-9943.299ENSSDUG00000020783-7344.091
ENSSDUG00000005401-8636.765ENSSDUG00000001918znf3665036.765
ENSSDUG00000005401-9441.860ENSSDUG00000016450-7344.000
ENSSDUG00000005401-9663.559ENSSDUG00000004867-9864.286
ENSSDUG00000005401-9681.091ENSSDUG00000006426-9981.818
ENSSDUG00000005401-9958.824ENSSDUG00000009425-8357.764
ENSSDUG00000005401-9760.674ENSSDUG00000009421-9960.674
ENSSDUG00000005401-9145.089ENSSDUG00000004089-9547.619
ENSSDUG00000005401-9737.662ENSSDUG00000000695-7739.936
ENSSDUG00000005401-9958.057ENSSDUG00000015182-8956.721
ENSSDUG00000005401-8538.393ENSSDUG00000013280-5332.143
ENSSDUG00000005401-9943.103ENSSDUG00000010249znf384l5742.793
ENSSDUG00000005401-9336.800ENSSDUG00000013335-9234.848
ENSSDUG00000005401-8243.636ENSSDUG00000000889-7548.101
ENSSDUG00000005401-9256.452ENSSDUG00000015159-10051.673
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSDUG00000005401-9956.272ENSACIG00000017647-9857.401Amphilophus_citrinellus
ENSSDUG00000005401-9657.006ENSAOCG00000003277-8166.667Amphiprion_ocellaris
ENSSDUG00000005401-9840.960ENSAPEG00000016601-9539.365Amphiprion_percula
ENSSDUG00000005401-9146.415ENSACLG00000015989-8847.525Astatotilapia_calliptera
ENSSDUG00000005401-9558.586ENSACLG00000005615-8554.000Astatotilapia_calliptera
ENSSDUG00000005401-8743.697ENSCSAVG00000002179-9943.697Ciona_savignyi
ENSSDUG00000005401-8649.390ENSCGRG00001004047-6548.936Cricetulus_griseus_chok1gshd
ENSSDUG00000005401-9643.784ENSCSEG00000001771-7543.307Cynoglossus_semilaevis
ENSSDUG00000005401-8644.205ENSEBUG00000002537-8746.715Eptatretus_burgeri
ENSSDUG00000005401-8845.915ENSEBUG00000011244-8747.130Eptatretus_burgeri
ENSSDUG00000005401-9247.959ENSEBUG00000002589-8847.959Eptatretus_burgeri
ENSSDUG00000005401-9144.012ENSHBUG00000016546-7644.444Haplochromis_burtoni
ENSSDUG00000005401-9558.586ENSHBUG00000020071-8554.000Haplochromis_burtoni
ENSSDUG00000005401-9354.749ENSHBUG00000012758-9954.859Haplochromis_burtoni
ENSSDUG00000005401-9344.101ENSMZEG00005020731-9744.101Maylandia_zebra
ENSSDUG00000005401-9443.346ENSMZEG00005027844-7644.444Maylandia_zebra
ENSSDUG00000005401-8554.422MGP_CAROLIEiJ_G0029612Zfp1415554.422Mus_caroli
ENSSDUG00000005401-8455.102ENSMUSG00000092416Zfp1415555.102Mus_musculus
ENSSDUG00000005401-8954.406MGP_SPRETEiJ_G0030709-8255.000Mus_spretus
ENSSDUG00000005401-9758.989ENSNBRG00000023229-9856.364Neolamprologus_brichardi
ENSSDUG00000005401-8746.341ENSONIG00000006238-9952.830Oreochromis_niloticus
ENSSDUG00000005401-9143.175ENSONIG00000014100-9942.949Oreochromis_niloticus
ENSSDUG00000005401-8544.876ENSONIG00000018188-10055.814Oreochromis_niloticus
ENSSDUG00000005401-9537.123ENSPFOG00000007708-9938.905Poecilia_formosa
ENSSDUG00000005401-8531.760ENSPLAG00000005897-5032.114Poecilia_latipinna
ENSSDUG00000005401-9950.442ENSPLAG00000010448-8949.048Poecilia_latipinna
ENSSDUG00000005401-8832.627ENSPMEG00000021030-5232.864Poecilia_mexicana
ENSSDUG00000005401-9543.750ENSPCAG00000001613-8344.718Procavia_capensis
ENSSDUG00000005401-9943.726ENSPNYG00000005671-8645.249Pundamilia_nyererei
ENSSDUG00000005401-8952.889ENSPNAG00000015131-9552.889Pygocentrus_nattereri
ENSSDUG00000005401-9953.333ENSSFOG00015000652ZNF7758553.333Scleropages_formosus
ENSSDUG00000005401-9149.845ENSSPUG00000007092-5052.000Sphenodon_punctatus
ENSSDUG00000005401-9550.296ENSSPUG00000007064-9952.113Sphenodon_punctatus
ENSSDUG00000005401-8851.361ENSSPAG00000009587-9951.361Stegastes_partitus
ENSSDUG00000005401-9542.735ENSSSCG00000032098-9242.553Sus_scrofa
ENSSDUG00000005401-8851.456ENSTTRG00000004891-7051.456Tursiops_truncatus
ENSSDUG00000005401-8749.145ENSXETG00000030967-9950.000Xenopus_tropicalis
ENSSDUG00000005401-8743.820ENSXETG00000015125-9755.000Xenopus_tropicalis

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