EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000005560 (Gene tree)
Gene ID: 111236736
Gene Symbol: arl13b
Alias: arl2l1|chunp6872|dkfzp761h079|fc23g07|scorpion|un-named hi459|unm hi459|wu:fc23g07|zgc:123149
Full Name: ADP ribosylation factor like GTPase 13B
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 6579 bases
Position: chrBDQW01000716.1:1215302-1221880
Accession: 111236736
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000007582	MMR_HSR1	PF01926.23	1.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000007723	-	1793	XM_022765586	ENSSDUP00000007582	400 (aa)	XP_022621307	-

Gene Model

Click here to download ENSSDUG00000005560's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000005560's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000005560	arl13b	63	42.063	ENSSDUG00000000933	arl13a	55	47.573

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000005560	arl13b	96	89.147	ENSAPOG00000013256	arl13b	94	91.214	Acanthochromis_polyacanthus
ENSSDUG00000005560	arl13b	96	89.610	ENSACIG00000017582	arl13b	95	97.826	Amphilophus_citrinellus
ENSSDUG00000005560	arl13b	96	89.147	ENSAOCG00000002828	arl13b	94	91.473	Amphiprion_ocellaris
ENSSDUG00000005560	arl13b	97	89.258	ENSAPEG00000014654	arl13b	99	90.722	Amphiprion_percula
ENSSDUG00000005560	arl13b	93	93.261	ENSATEG00000017586	arl13b	97	93.261	Anabas_testudineus
ENSSDUG00000005560	arl13b	97	62.981	ENSACAG00000000523	ARL13B	99	63.942	Anolis_carolinensis
ENSSDUG00000005560	arl13b	96	80.000	ENSACLG00000024227	arl13b	91	97.209	Astatotilapia_calliptera
ENSSDUG00000005560	arl13b	99	77.387	ENSAMXG00000042824	arl13b	100	77.179	Astyanax_mexicanus
ENSSDUG00000005560	arl13b	92	58.152	ENSCAPG00000006764	ARL13B	73	80.808	Cavia_aperea
ENSSDUG00000005560	arl13b	96	57.513	ENSCPOG00000002558	ARL13B	93	56.510	Cavia_porcellus
ENSSDUG00000005560	arl13b	91	61.082	ENSCLAG00000006379	ARL13B	94	62.016	Chinchilla_lanigera
ENSSDUG00000005560	arl13b	96	63.971	ENSCPBG00000005599	ARL13B	94	63.725	Chrysemys_picta_bellii
ENSSDUG00000005560	arl13b	98	81.360	ENSCSEG00000005258	arl13b	98	81.586	Cynoglossus_semilaevis
ENSSDUG00000005560	arl13b	98	84.143	ENSCVAG00000001545	arl13b	97	84.143	Cyprinodon_variegatus
ENSSDUG00000005560	arl13b	96	80.052	ENSDARG00000012763	arl13b	83	94.470	Danio_rerio
ENSSDUG00000005560	arl13b	67	51.866	ENSEBUG00000006528	arl13b	90	48.881	Eptatretus_burgeri
ENSSDUG00000005560	arl13b	67	74.532	ENSEEUG00000010823	ARL13B	65	74.643	Erinaceus_europaeus
ENSSDUG00000005560	arl13b	97	59.852	ENSFALG00000001654	ARL13B	100	60.741	Ficedula_albicollis
ENSSDUG00000005560	arl13b	96	62.469	ENSFDAG00000006556	ARL13B	94	63.704	Fukomys_damarensis
ENSSDUG00000005560	arl13b	97	80.977	ENSFHEG00000016049	arl13b	99	81.606	Fundulus_heteroclitus
ENSSDUG00000005560	arl13b	91	67.760	ENSGMOG00000018628	arl13b	93	67.760	Gadus_morhua
ENSSDUG00000005560	arl13b	96	81.654	ENSGAFG00000000025	arl13b	95	81.137	Gambusia_affinis
ENSSDUG00000005560	arl13b	96	85.455	ENSGACG00000014228	arl13b	94	85.455	Gasterosteus_aculeatus
ENSSDUG00000005560	arl13b	96	62.162	ENSGAGG00000019336	ARL13B	94	62.899	Gopherus_agassizii
ENSSDUG00000005560	arl13b	96	90.649	ENSHBUG00000020619	arl13b	94	90.390	Haplochromis_burtoni
ENSSDUG00000005560	arl13b	97	83.548	ENSHCOG00000006106	arl13b	100	83.290	Hippocampus_comes
ENSSDUG00000005560	arl13b	96	88.312	ENSKMAG00000001122	arl13b	93	88.312	Kryptolebias_marmoratus
ENSSDUG00000005560	arl13b	96	85.714	ENSLBEG00000014612	arl13b	94	85.714	Labrus_bergylta
ENSSDUG00000005560	arl13b	96	69.565	ENSLOCG00000010465	arl13b	94	69.565	Lepisosteus_oculatus
ENSSDUG00000005560	arl13b	96	92.727	ENSMAMG00000021452	arl13b	94	92.727	Mastacembelus_armatus
ENSSDUG00000005560	arl13b	96	90.390	ENSMZEG00005017827	arl13b	94	90.130	Maylandia_zebra
ENSSDUG00000005560	arl13b	96	83.420	ENSMMOG00000010253	arl13b	94	82.642	Mola_mola
ENSSDUG00000005560	arl13b	96	72.868	ENSMALG00000014655	arl13b	95	96.121	Monopterus_albus
ENSSDUG00000005560	arl13b	96	60.680	MGP_CAROLIEiJ_G0020856	Arl13b	94	62.624	Mus_caroli
ENSSDUG00000005560	arl13b	96	60.880	ENSMUSG00000022911	Arl13b	94	62.222	Mus_musculus
ENSSDUG00000005560	arl13b	96	61.975	MGP_PahariEiJ_G0016561	Arl13b	94	61.481	Mus_pahari
ENSSDUG00000005560	arl13b	96	60.880	MGP_SPRETEiJ_G0021763	Arl13b	94	62.222	Mus_spretus
ENSSDUG00000005560	arl13b	92	62.887	ENSMLUG00000017473	ARL13B	90	62.435	Myotis_lucifugus
ENSSDUG00000005560	arl13b	96	78.182	ENSNBRG00000004078	arl13b	92	98.253	Neolamprologus_brichardi
ENSSDUG00000005560	arl13b	96	59.259	ENSNLEG00000001772	ARL13B	94	60.294	Nomascus_leucogenys
ENSSDUG00000005560	arl13b	62	65.726	ENSMEUG00000008036	-	61	65.726	Notamacropus_eugenii
ENSSDUG00000005560	arl13b	96	61.634	ENSODEG00000011381	ARL13B	94	62.129	Octodon_degus
ENSSDUG00000005560	arl13b	96	85.194	ENSONIG00000001864	arl13b	94	84.466	Oreochromis_niloticus
ENSSDUG00000005560	arl13b	96	84.156	ENSORLG00000006350	arl13b	91	96.522	Oryzias_latipes
ENSSDUG00000005560	arl13b	96	83.896	ENSORLG00020013754	arl13b	94	83.636	Oryzias_latipes_hni
ENSSDUG00000005560	arl13b	96	83.896	ENSORLG00015012586	arl13b	94	83.636	Oryzias_latipes_hsok
ENSSDUG00000005560	arl13b	54	91.705	ENSOMEG00000010187	arl13b	84	91.705	Oryzias_melastigma
ENSSDUG00000005560	arl13b	97	64.706	ENSPSIG00000018115	ARL13B	99	64.706	Pelodiscus_sinensis
ENSSDUG00000005560	arl13b	96	84.675	ENSPMGG00000004584	arl13b	93	86.234	Periophthalmus_magnuspinnatus
ENSSDUG00000005560	arl13b	96	48.426	ENSPCIG00000026984	ARL13B	93	46.341	Phascolarctos_cinereus
ENSSDUG00000005560	arl13b	96	82.857	ENSPFOG00000005379	arl13b	94	83.117	Poecilia_formosa
ENSSDUG00000005560	arl13b	97	81.748	ENSPLAG00000008699	arl13b	99	82.642	Poecilia_latipinna
ENSSDUG00000005560	arl13b	93	82.210	ENSPMEG00000015387	arl13b	93	82.880	Poecilia_mexicana
ENSSDUG00000005560	arl13b	98	80.916	ENSPREG00000006291	arl13b	95	82.383	Poecilia_reticulata
ENSSDUG00000005560	arl13b	92	77.596	ENSPNYG00000022879	arl13b	91	81.967	Pundamilia_nyererei
ENSSDUG00000005560	arl13b	97	80.000	ENSPNAG00000003803	arl13b	96	79.845	Pygocentrus_nattereri
ENSSDUG00000005560	arl13b	56	84.889	ENSSFOG00015005491	arl13b	84	85.185	Scleropages_formosus
ENSSDUG00000005560	arl13b	54	72.685	ENSSFOG00015023057	arl13b	85	72.685	Scleropages_formosus
ENSSDUG00000005560	arl13b	96	84.755	ENSSMAG00000015450	arl13b	94	83.979	Scophthalmus_maximus
ENSSDUG00000005560	arl13b	97	98.715	ENSSLDG00000013361	arl13b	100	98.715	Seriola_lalandi_dorsalis
ENSSDUG00000005560	arl13b	96	62.035	ENSSARG00000003872	ARL13B	94	62.779	Sorex_araneus
ENSSDUG00000005560	arl13b	58	82.174	ENSSPUG00000006649	ARL13B	88	81.567	Sphenodon_punctatus
ENSSDUG00000005560	arl13b	98	91.304	ENSSPAG00000016442	arl13b	90	91.049	Stegastes_partitus
ENSSDUG00000005560	arl13b	96	61.097	ENSTGUG00000013493	ARL13B	94	58.209	Taeniopygia_guttata
ENSSDUG00000005560	arl13b	90	59.459	ENSTRUG00000013035	-	84	71.889	Takifugu_rubripes
ENSSDUG00000005560	arl13b	52	73.206	ENSTRUG00000003641	arl13b	74	71.939	Takifugu_rubripes
ENSSDUG00000005560	arl13b	88	62.331	ENSVVUG00000021511	ARL13B	92	61.497	Vulpes_vulpes
ENSSDUG00000005560	arl13b	96	60.964	ENSXETG00000032383	ARL13B	99	78.102	Xenopus_tropicalis
ENSSDUG00000005560	arl13b	52	40.758	ENSXETG00000026166	arl13a	50	40.758	Xenopus_tropicalis
ENSSDUG00000005560	arl13b	96	77.403	ENSXCOG00000016955	arl13b	93	77.403	Xiphophorus_couchianus
ENSSDUG00000005560	arl13b	97	82.005	ENSXMAG00000002089	arl13b	100	81.841	Xiphophorus_maculatus