EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000005610 (Gene tree)
Gene ID: 111223434
Gene Symbol: tra2a
Alias: zgc:64175
Full Name: transformer 2 alpha homolog
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 6520 bases
Position: chrBDQW01000110.1:3190197-3196716
Accession: 111223434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000007653	RRM_1	PF00076.22	3.2e-19	1	1
ENSSDUP00000007645	RRM_1	PF00076.22	3.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000007793	-	1793	-	ENSSDUP00000007653	285 (aa)	-	-
ENSSDUT00000007785	-	1847	XM_022747579	ENSSDUP00000007645	303 (aa)	XP_022603300	UPI000BBECAF6

Gene Model

Click here to download ENSSDUG00000005610's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000005610's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000005610	tra2a	89	83.594	ENSG00000164548	TRA2A	90	83.594	Homo_sapiens
ENSSDUG00000005610	tra2a	90	92.674	ENSAPOG00000017425	tra2a	90	92.674	Acanthochromis_polyacanthus
ENSSDUG00000005610	tra2a	85	84.362	ENSAMEG00000003501	TRA2A	74	84.362	Ailuropoda_melanoleuca
ENSSDUG00000005610	tra2a	95	93.793	ENSACIG00000001333	tra2a	100	93.793	Amphilophus_citrinellus
ENSSDUG00000005610	tra2a	90	93.040	ENSAOCG00000015445	tra2a	90	93.040	Amphiprion_ocellaris
ENSSDUG00000005610	tra2a	90	93.040	ENSAPEG00000018557	tra2a	91	92.896	Amphiprion_percula
ENSSDUG00000005610	tra2a	90	91.941	ENSATEG00000000671	tra2a	90	91.941	Anabas_testudineus
ENSSDUG00000005610	tra2a	85	82.857	ENSAPLG00000013689	TRA2A	60	84.524	Anas_platyrhynchos
ENSSDUG00000005610	tra2a	89	82.946	ENSACAG00000013502	TRA2A	90	81.008	Anolis_carolinensis
ENSSDUG00000005610	tra2a	89	64.844	ENSANAG00000035184	TRA2A	83	73.298	Aotus_nancymaae
ENSSDUG00000005610	tra2a	90	92.674	ENSACLG00000024845	tra2a	90	92.674	Astatotilapia_calliptera
ENSSDUG00000005610	tra2a	77	75.319	ENSAMXG00000005553	tra2a	100	75.745	Astyanax_mexicanus
ENSSDUG00000005610	tra2a	89	83.203	ENSBTAG00000012622	TRA2A	90	83.203	Bos_taurus
ENSSDUG00000005610	tra2a	94	82.090	ENSCJAG00000045802	-	96	81.641	Callithrix_jacchus
ENSSDUG00000005610	tra2a	89	83.594	ENSCJAG00000001509	-	90	83.594	Callithrix_jacchus
ENSSDUG00000005610	tra2a	89	83.203	ENSCAFG00000002788	TRA2A	91	83.203	Canis_familiaris
ENSSDUG00000005610	tra2a	59	85.882	ENSCAFG00020002745	TRA2A	62	86.310	Canis_lupus_dingo
ENSSDUG00000005610	tra2a	89	83.594	ENSTSYG00000000388	TRA2A	90	83.594	Carlito_syrichta
ENSSDUG00000005610	tra2a	86	71.545	ENSCAPG00000017377	TRA2A	57	68.452	Cavia_aperea
ENSSDUG00000005610	tra2a	89	83.594	ENSCPOG00000010739	TRA2A	90	83.594	Cavia_porcellus
ENSSDUG00000005610	tra2a	89	83.594	ENSCCAG00000019576	TRA2A	90	83.594	Cebus_capucinus
ENSSDUG00000005610	tra2a	89	83.594	ENSCATG00000041219	TRA2A	90	83.594	Cercocebus_atys
ENSSDUG00000005610	tra2a	89	83.594	ENSCLAG00000007917	TRA2A	90	83.594	Chinchilla_lanigera
ENSSDUG00000005610	tra2a	89	83.594	ENSCSAG00000014051	TRA2A	90	83.594	Chlorocebus_sabaeus
ENSSDUG00000005610	tra2a	89	83.203	ENSCHOG00000001130	TRA2A	90	83.203	Choloepus_hoffmanni
ENSSDUG00000005610	tra2a	89	81.783	ENSCPBG00000022466	TRA2A	90	82.171	Chrysemys_picta_bellii
ENSSDUG00000005610	tra2a	89	83.594	ENSCANG00000031292	TRA2A	90	83.594	Colobus_angolensis_palliatus
ENSSDUG00000005610	tra2a	89	84.766	ENSCGRG00001019980	Tra2a	90	82.031	Cricetulus_griseus_chok1gshd
ENSSDUG00000005610	tra2a	85	86.420	ENSCGRG00000006087	Tra2a	62	88.095	Cricetulus_griseus_crigri
ENSSDUG00000005610	tra2a	90	82.784	ENSCSEG00000012193	tra2a	90	80.952	Cynoglossus_semilaevis
ENSSDUG00000005610	tra2a	56	78.857	ENSDARG00000007863	tra2a	90	76.978	Danio_rerio
ENSSDUG00000005610	tra2a	89	83.984	ENSDNOG00000039446	TRA2A	90	83.984	Dasypus_novemcinctus
ENSSDUG00000005610	tra2a	89	83.203	ENSDORG00000009361	Tra2a	90	81.250	Dipodomys_ordii
ENSSDUG00000005610	tra2a	59	86.628	ENSETEG00000007250	TRA2A	59	87.059	Echinops_telfairi
ENSSDUG00000005610	tra2a	89	83.203	ENSEASG00005022002	TRA2A	90	83.203	Equus_asinus_asinus
ENSSDUG00000005610	tra2a	89	83.203	ENSECAG00000011508	TRA2A	90	83.203	Equus_caballus
ENSSDUG00000005610	tra2a	89	83.203	ENSEEUG00000015674	TRA2A	90	83.203	Erinaceus_europaeus
ENSSDUG00000005610	tra2a	77	82.203	ENSELUG00000005846	tra2a	91	74.074	Esox_lucius
ENSSDUG00000005610	tra2a	89	83.203	ENSFCAG00000005361	TRA2A	90	83.203	Felis_catus
ENSSDUG00000005610	tra2a	85	84.774	ENSFALG00000009605	TRA2A	89	84.362	Ficedula_albicollis
ENSSDUG00000005610	tra2a	89	84.375	ENSFDAG00000004949	TRA2A	90	83.594	Fukomys_damarensis
ENSSDUG00000005610	tra2a	90	76.978	ENSGMOG00000013740	tra2a	91	75.540	Gadus_morhua
ENSSDUG00000005610	tra2a	89	81.395	ENSGALG00000010973	TRA2A	90	81.395	Gallus_gallus
ENSSDUG00000005610	tra2a	90	81.091	ENSGACG00000006878	tra2a	90	80.797	Gasterosteus_aculeatus
ENSSDUG00000005610	tra2a	89	81.783	ENSGAGG00000005793	TRA2A	90	81.783	Gopherus_agassizii
ENSSDUG00000005610	tra2a	89	83.594	ENSGGOG00000009053	TRA2A	90	83.594	Gorilla_gorilla
ENSSDUG00000005610	tra2a	90	92.308	ENSHBUG00000018234	tra2a	90	92.308	Haplochromis_burtoni
ENSSDUG00000005610	tra2a	89	83.594	ENSHGLG00000012168	TRA2A	90	83.594	Heterocephalus_glaber_female
ENSSDUG00000005610	tra2a	89	83.594	ENSHGLG00100014577	TRA2A	90	83.594	Heterocephalus_glaber_male
ENSSDUG00000005610	tra2a	64	68.557	ENSHCOG00000006320	tra2a	96	68.557	Hippocampus_comes
ENSSDUG00000005610	tra2a	65	66.492	ENSHCOG00000006314	tra2a	80	66.250	Hippocampus_comes
ENSSDUG00000005610	tra2a	89	83.594	ENSSTOG00000012073	TRA2A	90	83.594	Ictidomys_tridecemlineatus
ENSSDUG00000005610	tra2a	89	83.203	ENSJJAG00000022787	Tra2a	90	81.250	Jaculus_jaculus
ENSSDUG00000005610	tra2a	86	86.590	ENSLBEG00000005297	tra2a	88	87.259	Labrus_bergylta
ENSSDUG00000005610	tra2a	90	79.197	ENSLACG00000014765	TRA2A	90	79.197	Latimeria_chalumnae
ENSSDUG00000005610	tra2a	90	82.246	ENSLOCG00000011615	-	90	82.246	Lepisosteus_oculatus
ENSSDUG00000005610	tra2a	89	83.984	ENSLAFG00000006598	TRA2A	90	83.984	Loxodonta_africana
ENSSDUG00000005610	tra2a	89	83.594	ENSMFAG00000043211	TRA2A	90	83.594	Macaca_fascicularis
ENSSDUG00000005610	tra2a	89	83.594	ENSMMUG00000006286	TRA2A	90	83.594	Macaca_mulatta
ENSSDUG00000005610	tra2a	89	83.594	ENSMNEG00000040670	TRA2A	90	83.594	Macaca_nemestrina
ENSSDUG00000005610	tra2a	89	83.594	ENSMLEG00000032154	TRA2A	90	83.594	Mandrillus_leucophaeus
ENSSDUG00000005610	tra2a	77	95.279	ENSMAMG00000008575	tra2a	91	95.279	Mastacembelus_armatus
ENSSDUG00000005610	tra2a	90	92.674	ENSMZEG00005009142	tra2a	90	92.674	Maylandia_zebra
ENSSDUG00000005610	tra2a	89	81.008	ENSMGAG00000010514	TRA2A	90	81.395	Meleagris_gallopavo
ENSSDUG00000005610	tra2a	89	83.984	ENSMICG00000043639	-	90	83.984	Microcebus_murinus
ENSSDUG00000005610	tra2a	100	67.832	ENSMICG00000036849	-	61	72.619	Microcebus_murinus
ENSSDUG00000005610	tra2a	63	81.768	ENSMOCG00000010249	-	63	80.952	Microtus_ochrogaster
ENSSDUG00000005610	tra2a	70	72.772	ENSMOCG00000006467	-	60	87.719	Microtus_ochrogaster
ENSSDUG00000005610	tra2a	88	88.538	ENSMMOG00000020174	tra2a	83	88.934	Mola_mola
ENSSDUG00000005610	tra2a	89	84.375	ENSMODG00000000807	TRA2A	90	84.375	Monodelphis_domestica
ENSSDUG00000005610	tra2a	86	90.000	ENSMALG00000020875	tra2a	90	89.744	Monopterus_albus
ENSSDUG00000005610	tra2a	89	84.766	ENSMUSG00000029817	Tra2a	90	82.031	Mus_musculus
ENSSDUG00000005610	tra2a	89	85.156	MGP_PahariEiJ_G0022115	Tra2a	90	82.422	Mus_pahari
ENSSDUG00000005610	tra2a	89	84.766	MGP_SPRETEiJ_G0029368	Tra2a	90	82.031	Mus_spretus
ENSSDUG00000005610	tra2a	89	83.203	ENSMPUG00000013480	TRA2A	90	83.203	Mustela_putorius_furo
ENSSDUG00000005610	tra2a	89	84.375	ENSMLUG00000013972	TRA2A	90	83.594	Myotis_lucifugus
ENSSDUG00000005610	tra2a	89	83.203	ENSNGAG00000023805	Tra2a	90	81.250	Nannospalax_galili
ENSSDUG00000005610	tra2a	64	97.268	ENSNBRG00000005992	tra2a	87	97.268	Neolamprologus_brichardi
ENSSDUG00000005610	tra2a	65	62.703	ENSNLEG00000029659	-	88	65.806	Nomascus_leucogenys
ENSSDUG00000005610	tra2a	89	83.594	ENSNLEG00000014794	TRA2A	90	83.594	Nomascus_leucogenys
ENSSDUG00000005610	tra2a	89	82.812	ENSMEUG00000001202	TRA2A	90	83.594	Notamacropus_eugenii
ENSSDUG00000005610	tra2a	89	82.031	ENSOPRG00000007606	TRA2A	90	82.031	Ochotona_princeps
ENSSDUG00000005610	tra2a	89	83.594	ENSODEG00000008335	TRA2A	90	83.594	Octodon_degus
ENSSDUG00000005610	tra2a	90	91.304	ENSONIG00000004503	tra2a	90	91.304	Oreochromis_niloticus
ENSSDUG00000005610	tra2a	89	82.171	ENSOANG00000014202	TRA2A	90	81.008	Ornithorhynchus_anatinus
ENSSDUG00000005610	tra2a	89	83.203	ENSOCUG00000024139	TRA2A	90	83.203	Oryctolagus_cuniculus
ENSSDUG00000005610	tra2a	89	68.605	ENSORLG00000022191	tra2a	60	74.118	Oryzias_latipes
ENSSDUG00000005610	tra2a	89	68.605	ENSORLG00020003490	tra2a	60	74.118	Oryzias_latipes_hni
ENSSDUG00000005610	tra2a	89	68.217	ENSORLG00015015485	tra2a	60	73.529	Oryzias_latipes_hsok
ENSSDUG00000005610	tra2a	89	68.872	ENSOMEG00000017864	tra2a	59	74.251	Oryzias_melastigma
ENSSDUG00000005610	tra2a	85	85.185	ENSOGAG00000009733	TRA2A	85	85.185	Otolemur_garnettii
ENSSDUG00000005610	tra2a	89	83.594	ENSOARG00000013147	TRA2A	90	83.594	Ovis_aries
ENSSDUG00000005610	tra2a	89	76.953	ENSOARG00000002323	-	89	76.172	Ovis_aries
ENSSDUG00000005610	tra2a	89	83.594	ENSPPAG00000034382	TRA2A	90	83.594	Pan_paniscus
ENSSDUG00000005610	tra2a	89	83.203	ENSPPRG00000015216	TRA2A	90	83.203	Panthera_pardus
ENSSDUG00000005610	tra2a	89	83.203	ENSPTIG00000021114	TRA2A	90	83.203	Panthera_tigris_altaica
ENSSDUG00000005610	tra2a	91	83.784	ENSPTRG00000018988	TRA2A	91	83.594	Pan_troglodytes
ENSSDUG00000005610	tra2a	89	83.594	ENSPTRG00000046098	-	90	83.594	Pan_troglodytes
ENSSDUG00000005610	tra2a	89	83.594	ENSPANG00000014541	TRA2A	90	83.594	Papio_anubis
ENSSDUG00000005610	tra2a	90	81.522	ENSPKIG00000012298	tra2a	90	78.986	Paramormyrops_kingsleyae
ENSSDUG00000005610	tra2a	88	82.937	ENSPSIG00000014993	TRA2A	90	82.937	Pelodiscus_sinensis
ENSSDUG00000005610	tra2a	89	83.594	ENSPEMG00000008564	-	90	81.641	Peromyscus_maniculatus_bairdii
ENSSDUG00000005610	tra2a	63	68.508	ENSPMAG00000007947	tra2a	60	68.712	Petromyzon_marinus
ENSSDUG00000005610	tra2a	89	84.375	ENSPCIG00000007917	TRA2A	90	84.375	Phascolarctos_cinereus
ENSSDUG00000005610	tra2a	89	83.594	ENSPPYG00000017728	TRA2A	90	83.594	Pongo_abelii
ENSSDUG00000005610	tra2a	89	84.375	ENSPCAG00000004148	TRA2A	91	84.375	Procavia_capensis
ENSSDUG00000005610	tra2a	62	85.227	ENSPCOG00000020465	TRA2A	88	67.188	Propithecus_coquereli
ENSSDUG00000005610	tra2a	89	83.594	ENSPVAG00000011298	TRA2A	90	83.594	Pteropus_vampyrus
ENSSDUG00000005610	tra2a	86	81.749	ENSPNYG00000020134	tra2a	90	96.739	Pundamilia_nyererei
ENSSDUG00000005610	tra2a	90	76.087	ENSPNAG00000000482	tra2a	90	76.449	Pygocentrus_nattereri
ENSSDUG00000005610	tra2a	89	84.766	ENSRNOG00000009156	Tra2a	90	82.031	Rattus_norvegicus
ENSSDUG00000005610	tra2a	89	83.594	ENSRROG00000030758	TRA2A	90	83.594	Rhinopithecus_roxellana
ENSSDUG00000005610	tra2a	89	83.594	ENSSBOG00000031562	TRA2A	90	83.594	Saimiri_boliviensis_boliviensis
ENSSDUG00000005610	tra2a	88	83.794	ENSSHAG00000005727	TRA2A	88	83.794	Sarcophilus_harrisii
ENSSDUG00000005610	tra2a	89	85.490	ENSSFOG00015014004	tra2a	90	80.797	Scleropages_formosus
ENSSDUG00000005610	tra2a	94	86.620	ENSSMAG00000014242	tra2a	90	86.447	Scophthalmus_maximus
ENSSDUG00000005610	tra2a	64	93.443	ENSSLDG00000025577	tra2a	96	93.443	Seriola_lalandi_dorsalis
ENSSDUG00000005610	tra2a	61	83.333	ENSSARG00000012900	TRA2A	62	83.333	Sorex_araneus
ENSSDUG00000005610	tra2a	89	83.721	ENSSPUG00000006143	TRA2A	90	84.109	Sphenodon_punctatus
ENSSDUG00000005610	tra2a	100	97.360	ENSSPAG00000004184	tra2a	100	97.360	Stegastes_partitus
ENSSDUG00000005610	tra2a	89	83.203	ENSSSCG00000015387	TRA2A	90	83.203	Sus_scrofa
ENSSDUG00000005610	tra2a	61	82.759	ENSTGUG00000002795	TRA2A	61	81.548	Taeniopygia_guttata
ENSSDUG00000005610	tra2a	75	86.385	ENSTBEG00000013773	TRA2A	75	84.038	Tupaia_belangeri
ENSSDUG00000005610	tra2a	89	82.812	ENSTTRG00000008922	TRA2A	90	82.812	Tursiops_truncatus
ENSSDUG00000005610	tra2a	54	89.032	ENSUMAG00000001181	TRA2A	79	87.742	Ursus_maritimus
ENSSDUG00000005610	tra2a	61	84.571	ENSVPAG00000001829	TRA2A	62	84.571	Vicugna_pacos
ENSSDUG00000005610	tra2a	89	83.203	ENSVVUG00000001045	TRA2A	90	83.203	Vulpes_vulpes
ENSSDUG00000005610	tra2a	59	83.616	ENSXETG00000007397	tra2a	61	84.000	Xenopus_tropicalis