EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000005764 (Gene tree)
Gene ID: 111238905
Gene Symbol: mrpl28
Alias: wu:fa96b11|zgc:110013
Full Name: mitochondrial ribosomal protein L28
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 5162 bases
Position: chrBDQW01001731.1:652300-657461
Accession: 111238905
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000007851	Ribosomal_L28	PF00830.19	4.7e-08	1	1
ENSSDUP00000007865	Ribosomal_L28	PF00830.19	4.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000007993	-	3561	XM_022768625	ENSSDUP00000007851	251 (aa)	XP_022624346	UPI000BBEE8F7
ENSSDUT00000008007	-	3563	-	ENSSDUP00000007865	274 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000005764's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000005764's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000005764	mrpl28	99	64.940	ENSG00000086504	MRPL28	100	67.431	Homo_sapiens
ENSSDUG00000005764	mrpl28	100	82.869	ENSAPOG00000016883	mrpl28	100	82.869	Acanthochromis_polyacanthus
ENSSDUG00000005764	mrpl28	99	64.940	ENSAMEG00000007031	MRPL28	98	64.940	Ailuropoda_melanoleuca
ENSSDUG00000005764	mrpl28	99	86.747	ENSACIG00000005641	mrpl28	99	86.747	Amphilophus_citrinellus
ENSSDUG00000005764	mrpl28	99	84.462	ENSAOCG00000024148	mrpl28	99	84.462	Amphiprion_ocellaris
ENSSDUG00000005764	mrpl28	99	84.800	ENSAPEG00000010705	mrpl28	99	84.800	Amphiprion_percula
ENSSDUG00000005764	mrpl28	99	84.000	ENSATEG00000013085	mrpl28	99	84.000	Anabas_testudineus
ENSSDUG00000005764	mrpl28	54	68.889	ENSAPLG00000006257	MRPL28	96	68.889	Anas_platyrhynchos
ENSSDUG00000005764	mrpl28	97	59.375	ENSACAG00000015301	MRPL28	98	59.375	Anolis_carolinensis
ENSSDUG00000005764	mrpl28	99	65.339	ENSANAG00000022423	MRPL28	98	65.339	Aotus_nancymaae
ENSSDUG00000005764	mrpl28	99	87.200	ENSACLG00000017376	mrpl28	99	87.200	Astatotilapia_calliptera
ENSSDUG00000005764	mrpl28	100	75.397	ENSAMXG00000001999	mrpl28	99	75.397	Astyanax_mexicanus
ENSSDUG00000005764	mrpl28	99	64.542	ENSBTAG00000016581	MRPL28	92	64.032	Bos_taurus
ENSSDUG00000005764	mrpl28	99	62.302	ENSCAFG00000019682	MRPL28	98	63.095	Canis_familiaris
ENSSDUG00000005764	mrpl28	99	63.347	ENSCAFG00020009225	MRPL28	98	63.347	Canis_lupus_dingo
ENSSDUG00000005764	mrpl28	99	63.745	ENSCHIG00000016968	MRPL28	98	63.745	Capra_hircus
ENSSDUG00000005764	mrpl28	90	65.198	ENSTSYG00000032509	MRPL28	91	65.158	Carlito_syrichta
ENSSDUG00000005764	mrpl28	62	69.032	ENSCAPG00000011681	MRPL28	96	69.032	Cavia_aperea
ENSSDUG00000005764	mrpl28	99	66.932	ENSCPOG00000007176	MRPL28	97	66.932	Cavia_porcellus
ENSSDUG00000005764	mrpl28	99	64.940	ENSCCAG00000030887	MRPL28	98	64.940	Cebus_capucinus
ENSSDUG00000005764	mrpl28	99	66.932	ENSCATG00000040016	MRPL28	98	66.932	Cercocebus_atys
ENSSDUG00000005764	mrpl28	99	66.534	ENSCLAG00000014858	MRPL28	98	66.534	Chinchilla_lanigera
ENSSDUG00000005764	mrpl28	99	66.534	ENSCSAG00000012838	MRPL28	98	66.534	Chlorocebus_sabaeus
ENSSDUG00000005764	mrpl28	97	74.286	ENSCPBG00000026390	MRPL28	97	74.286	Chrysemys_picta_bellii
ENSSDUG00000005764	mrpl28	90	45.339	ENSCING00000023726	-	88	45.339	Ciona_intestinalis
ENSSDUG00000005764	mrpl28	90	43.644	ENSCSAVG00000003761	-	83	43.644	Ciona_savignyi
ENSSDUG00000005764	mrpl28	99	65.737	ENSCANG00000033941	MRPL28	98	65.737	Colobus_angolensis_palliatus
ENSSDUG00000005764	mrpl28	99	66.534	ENSCGRG00001012825	Mrpl28	98	66.534	Cricetulus_griseus_chok1gshd
ENSSDUG00000005764	mrpl28	99	66.534	ENSCGRG00000014549	Mrpl28	98	66.534	Cricetulus_griseus_crigri
ENSSDUG00000005764	mrpl28	99	79.600	ENSCSEG00000008095	mrpl28	99	79.600	Cynoglossus_semilaevis
ENSSDUG00000005764	mrpl28	100	82.072	ENSCVAG00000005123	mrpl28	100	82.072	Cyprinodon_variegatus
ENSSDUG00000005764	mrpl28	100	73.016	ENSDARG00000057805	mrpl28	100	73.016	Danio_rerio
ENSSDUG00000005764	mrpl28	62	69.677	ENSDORG00000024147	Mrpl28	97	69.677	Dipodomys_ordii
ENSSDUG00000005764	mrpl28	97	66.531	ENSEBUG00000004106	mrpl28	98	66.531	Eptatretus_burgeri
ENSSDUG00000005764	mrpl28	100	63.492	ENSEASG00005018175	MRPL28	98	63.492	Equus_asinus_asinus
ENSSDUG00000005764	mrpl28	100	63.095	ENSECAG00000022663	MRPL28	98	63.095	Equus_caballus
ENSSDUG00000005764	mrpl28	99	65.060	ENSEEUG00000006626	MRPL28	94	63.602	Erinaceus_europaeus
ENSSDUG00000005764	mrpl28	100	80.952	ENSELUG00000014104	mrpl28	100	80.952	Esox_lucius
ENSSDUG00000005764	mrpl28	99	64.542	ENSFCAG00000041050	MRPL28	98	64.542	Felis_catus
ENSSDUG00000005764	mrpl28	59	67.347	ENSFALG00000004103	MRPL28	96	67.347	Ficedula_albicollis
ENSSDUG00000005764	mrpl28	99	64.940	ENSFDAG00000011002	MRPL28	98	64.940	Fukomys_damarensis
ENSSDUG00000005764	mrpl28	99	82.470	ENSFHEG00000006545	mrpl28	99	82.470	Fundulus_heteroclitus
ENSSDUG00000005764	mrpl28	99	80.000	ENSGMOG00000010597	mrpl28	98	80.000	Gadus_morhua
ENSSDUG00000005764	mrpl28	96	65.432	ENSGALG00000007473	MRPL28	97	65.432	Gallus_gallus
ENSSDUG00000005764	mrpl28	99	82.000	ENSGAFG00000012123	mrpl28	99	82.000	Gambusia_affinis
ENSSDUG00000005764	mrpl28	99	81.928	ENSGACG00000009641	mrpl28	99	81.323	Gasterosteus_aculeatus
ENSSDUG00000005764	mrpl28	97	73.061	ENSGAGG00000023391	MRPL28	97	73.061	Gopherus_agassizii
ENSSDUG00000005764	mrpl28	99	65.339	ENSGGOG00000006668	MRPL28	98	65.339	Gorilla_gorilla
ENSSDUG00000005764	mrpl28	88	89.545	ENSHBUG00000002357	mrpl28	94	89.545	Haplochromis_burtoni
ENSSDUG00000005764	mrpl28	99	66.932	ENSHGLG00000003807	MRPL28	98	66.932	Heterocephalus_glaber_female
ENSSDUG00000005764	mrpl28	99	66.932	ENSHGLG00100012704	MRPL28	98	66.932	Heterocephalus_glaber_male
ENSSDUG00000005764	mrpl28	99	83.133	ENSHCOG00000000219	mrpl28	99	83.133	Hippocampus_comes
ENSSDUG00000005764	mrpl28	100	77.381	ENSIPUG00000015984	mrpl28	99	77.381	Ictalurus_punctatus
ENSSDUG00000005764	mrpl28	99	66.534	ENSSTOG00000012316	MRPL28	96	66.534	Ictidomys_tridecemlineatus
ENSSDUG00000005764	mrpl28	99	65.737	ENSJJAG00000008947	Mrpl28	98	65.737	Jaculus_jaculus
ENSSDUG00000005764	mrpl28	99	80.800	ENSKMAG00000021277	mrpl28	99	80.800	Kryptolebias_marmoratus
ENSSDUG00000005764	mrpl28	100	79.134	ENSLBEG00000020499	mrpl28	100	79.134	Labrus_bergylta
ENSSDUG00000005764	mrpl28	99	61.597	ENSLACG00000009989	MRPL28	99	61.597	Latimeria_chalumnae
ENSSDUG00000005764	mrpl28	99	76.494	ENSLOCG00000014850	mrpl28	99	76.494	Lepisosteus_oculatus
ENSSDUG00000005764	mrpl28	100	62.302	ENSLAFG00000010776	MRPL28	99	62.302	Loxodonta_africana
ENSSDUG00000005764	mrpl28	99	66.534	ENSMFAG00000006698	MRPL28	98	66.534	Macaca_fascicularis
ENSSDUG00000005764	mrpl28	99	66.135	ENSMMUG00000000609	MRPL28	98	66.135	Macaca_mulatta
ENSSDUG00000005764	mrpl28	99	66.534	ENSMNEG00000027279	MRPL28	98	66.534	Macaca_nemestrina
ENSSDUG00000005764	mrpl28	99	66.534	ENSMLEG00000002439	MRPL28	98	66.534	Mandrillus_leucophaeus
ENSSDUG00000005764	mrpl28	99	82.000	ENSMAMG00000011487	mrpl28	99	82.000	Mastacembelus_armatus
ENSSDUG00000005764	mrpl28	99	87.200	ENSMZEG00005016524	mrpl28	99	87.200	Maylandia_zebra
ENSSDUG00000005764	mrpl28	99	65.737	ENSMAUG00000003487	Mrpl28	98	65.737	Mesocricetus_auratus
ENSSDUG00000005764	mrpl28	91	68.122	ENSMICG00000031344	MRPL28	98	65.339	Microcebus_murinus
ENSSDUG00000005764	mrpl28	99	65.737	ENSMOCG00000014836	Mrpl28	98	65.737	Microtus_ochrogaster
ENSSDUG00000005764	mrpl28	100	85.657	ENSMMOG00000012412	mrpl28	100	85.657	Mola_mola
ENSSDUG00000005764	mrpl28	100	67.460	ENSMODG00000016666	MRPL28	99	67.729	Monodelphis_domestica
ENSSDUG00000005764	mrpl28	99	85.200	ENSMALG00000011904	mrpl28	100	85.200	Monopterus_albus
ENSSDUG00000005764	mrpl28	99	63.745	MGP_CAROLIEiJ_G0021273	Mrpl28	98	63.745	Mus_caroli
ENSSDUG00000005764	mrpl28	99	63.745	ENSMUSG00000024181	Mrpl28	98	63.745	Mus_musculus
ENSSDUG00000005764	mrpl28	99	63.347	MGP_PahariEiJ_G0023591	Mrpl28	98	63.347	Mus_pahari
ENSSDUG00000005764	mrpl28	99	63.745	MGP_SPRETEiJ_G0022184	Mrpl28	98	63.745	Mus_spretus
ENSSDUG00000005764	mrpl28	99	66.932	ENSMPUG00000016020	MRPL28	98	66.932	Mustela_putorius_furo
ENSSDUG00000005764	mrpl28	99	65.737	ENSMLUG00000010009	MRPL28	98	65.737	Myotis_lucifugus
ENSSDUG00000005764	mrpl28	88	69.231	ENSNGAG00000016312	Mrpl28	95	69.231	Nannospalax_galili
ENSSDUG00000005764	mrpl28	99	87.600	ENSNBRG00000005544	mrpl28	99	87.600	Neolamprologus_brichardi
ENSSDUG00000005764	mrpl28	99	65.737	ENSNLEG00000031011	MRPL28	98	65.737	Nomascus_leucogenys
ENSSDUG00000005764	mrpl28	99	67.729	ENSMEUG00000000407	MRPL28	98	67.729	Notamacropus_eugenii
ENSSDUG00000005764	mrpl28	99	66.932	ENSODEG00000015538	MRPL28	98	66.932	Octodon_degus
ENSSDUG00000005764	mrpl28	99	87.600	ENSONIG00000005965	mrpl28	99	87.600	Oreochromis_niloticus
ENSSDUG00000005764	mrpl28	100	85.259	ENSORLG00000006806	mrpl28	100	85.259	Oryzias_latipes
ENSSDUG00000005764	mrpl28	100	85.259	ENSORLG00020002937	mrpl28	100	85.259	Oryzias_latipes_hni
ENSSDUG00000005764	mrpl28	100	84.861	ENSORLG00015005123	mrpl28	100	84.861	Oryzias_latipes_hsok
ENSSDUG00000005764	mrpl28	99	84.800	ENSOMEG00000013553	mrpl28	99	84.800	Oryzias_melastigma
ENSSDUG00000005764	mrpl28	99	66.534	ENSOGAG00000014941	MRPL28	98	66.534	Otolemur_garnettii
ENSSDUG00000005764	mrpl28	99	63.745	ENSOARG00000011786	MRPL28	98	63.745	Ovis_aries
ENSSDUG00000005764	mrpl28	99	64.542	ENSPPAG00000034473	MRPL28	98	64.542	Pan_paniscus
ENSSDUG00000005764	mrpl28	99	64.542	ENSPPRG00000002937	MRPL28	98	64.542	Panthera_pardus
ENSSDUG00000005764	mrpl28	99	64.542	ENSPTIG00000017626	MRPL28	98	64.542	Panthera_tigris_altaica
ENSSDUG00000005764	mrpl28	99	64.940	ENSPTRG00000047553	MRPL28	98	64.940	Pan_troglodytes
ENSSDUG00000005764	mrpl28	99	66.932	ENSPANG00000018773	MRPL28	98	66.932	Papio_anubis
ENSSDUG00000005764	mrpl28	99	75.299	ENSPKIG00000010370	mrpl28	100	75.299	Paramormyrops_kingsleyae
ENSSDUG00000005764	mrpl28	94	71.429	ENSPSIG00000011177	MRPL28	97	71.429	Pelodiscus_sinensis
ENSSDUG00000005764	mrpl28	99	84.000	ENSPMGG00000014190	mrpl28	99	84.000	Periophthalmus_magnuspinnatus
ENSSDUG00000005764	mrpl28	99	66.534	ENSPEMG00000019054	Mrpl28	98	66.534	Peromyscus_maniculatus_bairdii
ENSSDUG00000005764	mrpl28	99	64.143	ENSPMAG00000004202	mrpl28	98	64.143	Petromyzon_marinus
ENSSDUG00000005764	mrpl28	99	67.331	ENSPCIG00000000377	MRPL28	93	64.662	Phascolarctos_cinereus
ENSSDUG00000005764	mrpl28	99	82.800	ENSPFOG00000009485	mrpl28	99	82.800	Poecilia_formosa
ENSSDUG00000005764	mrpl28	99	81.600	ENSPLAG00000020059	mrpl28	99	81.600	Poecilia_latipinna
ENSSDUG00000005764	mrpl28	99	82.800	ENSPMEG00000012919	mrpl28	99	82.800	Poecilia_mexicana
ENSSDUG00000005764	mrpl28	99	81.200	ENSPREG00000022968	mrpl28	99	81.200	Poecilia_reticulata
ENSSDUG00000005764	mrpl28	88	67.873	ENSPPYG00000006906	MRPL28	100	67.873	Pongo_abelii
ENSSDUG00000005764	mrpl28	99	63.347	ENSPCAG00000011480	MRPL28	98	63.347	Procavia_capensis
ENSSDUG00000005764	mrpl28	99	64.940	ENSPCOG00000021895	MRPL28	98	64.940	Propithecus_coquereli
ENSSDUG00000005764	mrpl28	99	54.183	ENSPVAG00000000551	MRPL28	98	54.183	Pteropus_vampyrus
ENSSDUG00000005764	mrpl28	88	89.091	ENSPNYG00000005347	mrpl28	94	89.091	Pundamilia_nyererei
ENSSDUG00000005764	mrpl28	99	77.510	ENSPNAG00000009296	mrpl28	98	77.510	Pygocentrus_nattereri
ENSSDUG00000005764	mrpl28	99	63.347	ENSRNOG00000042720	Mrpl28	98	63.347	Rattus_norvegicus
ENSSDUG00000005764	mrpl28	99	66.135	ENSRBIG00000029953	MRPL28	98	66.135	Rhinopithecus_bieti
ENSSDUG00000005764	mrpl28	99	65.737	ENSRROG00000042756	MRPL28	98	65.737	Rhinopithecus_roxellana
ENSSDUG00000005764	mrpl28	96	65.289	ENSSBOG00000019789	MRPL28	95	65.289	Saimiri_boliviensis_boliviensis
ENSSDUG00000005764	mrpl28	99	68.526	ENSSHAG00000007606	MRPL28	99	68.526	Sarcophilus_harrisii
ENSSDUG00000005764	mrpl28	100	78.175	ENSSFOG00015006866	mrpl28	100	78.175	Scleropages_formosus
ENSSDUG00000005764	mrpl28	99	85.600	ENSSMAG00000013912	mrpl28	99	85.600	Scophthalmus_maximus
ENSSDUG00000005764	mrpl28	100	98.008	ENSSLDG00000000409	mrpl28	100	98.008	Seriola_lalandi_dorsalis
ENSSDUG00000005764	mrpl28	59	59.732	ENSSARG00000006277	-	100	58.940	Sorex_araneus
ENSSDUG00000005764	mrpl28	97	72.245	ENSSPUG00000015322	MRPL28	98	72.245	Sphenodon_punctatus
ENSSDUG00000005764	mrpl28	100	84.861	ENSSPAG00000011153	mrpl28	100	84.861	Stegastes_partitus
ENSSDUG00000005764	mrpl28	99	63.600	ENSSSCG00000007984	MRPL28	98	63.600	Sus_scrofa
ENSSDUG00000005764	mrpl28	99	84.000	ENSTRUG00000019877	mrpl28	99	84.000	Takifugu_rubripes
ENSSDUG00000005764	mrpl28	99	84.400	ENSTNIG00000007746	mrpl28	99	84.400	Tetraodon_nigroviridis
ENSSDUG00000005764	mrpl28	94	72.269	ENSTNIG00000002347	-	100	72.269	Tetraodon_nigroviridis
ENSSDUG00000005764	mrpl28	50	71.200	ENSTTRG00000009128	-	78	71.200	Tursiops_truncatus
ENSSDUG00000005764	mrpl28	99	66.534	ENSUAMG00000015724	MRPL28	94	66.534	Ursus_americanus
ENSSDUG00000005764	mrpl28	99	66.135	ENSUMAG00000021029	MRPL28	98	66.135	Ursus_maritimus
ENSSDUG00000005764	mrpl28	61	60.234	ENSVVUG00000013414	MRPL28	61	60.234	Vulpes_vulpes
ENSSDUG00000005764	mrpl28	100	66.270	ENSXETG00000011564	mrpl28	99	66.270	Xenopus_tropicalis
ENSSDUG00000005764	mrpl28	99	82.800	ENSXCOG00000012655	mrpl28	99	82.800	Xiphophorus_couchianus
ENSSDUG00000005764	mrpl28	99	82.800	ENSXMAG00000004293	mrpl28	99	82.800	Xiphophorus_maculatus