EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000005766 (Gene tree)
Gene ID: 111240448
Gene Symbol: srsf5b
Alias: sfrs5b|wu:fe15e05|zgc:113907|zgc:92278
Full Name: serine/arginine-rich splicing factor 5-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 12937 bases
Position: chrBDQW01000025.1:18187249-18200185
Accession: 111240448
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000007855	RRM_1	PF00076.22	1e-31	1	2
ENSSDUP00000007855	RRM_1	PF00076.22	1e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000007997	-	1147	XM_022770469	ENSSDUP00000007855	285 (aa)	XP_022626190	-

Gene Model

Click here to download ENSSDUG00000005766's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03040	Spliceosome	KEGG
sdu05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000005766's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000005766	srsf5b	65	70.652	ENSSDUG00000006103	srsf5a	64	69.519
ENSSDUG00000005766	srsf5b	61	41.111	ENSSDUG00000018908	srsf9	68	42.541
ENSSDUG00000005766	srsf5b	76	39.189	ENSSDUG00000003929	-	67	44.509
ENSSDUG00000005766	srsf5b	63	65.556	ENSSDUG00000007387	srsf4	52	65.193
ENSSDUG00000005766	srsf5b	71	38.164	ENSSDUG00000003887	-	93	38.683
ENSSDUG00000005766	srsf5b	63	63.889	ENSSDUG00000016097	srsf6a	52	63.889
ENSSDUG00000005766	srsf5b	59	47.399	ENSSDUG00000011303	-	68	43.646

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000005766	srsf5b	65	81.081	ENSG00000100650	SRSF5	98	74.219	Homo_sapiens
ENSSDUG00000005766	srsf5b	92	97.318	ENSAPOG00000008642	srsf5b	89	97.318	Acanthochromis_polyacanthus
ENSSDUG00000005766	srsf5b	65	81.081	ENSAMEG00000014574	SRSF5	95	71.691	Ailuropoda_melanoleuca
ENSSDUG00000005766	srsf5b	92	95.802	ENSACIG00000010742	srsf5b	89	95.802	Amphilophus_citrinellus
ENSSDUG00000005766	srsf5b	92	96.935	ENSAOCG00000005719	srsf5b	89	96.935	Amphiprion_ocellaris
ENSSDUG00000005766	srsf5b	92	96.935	ENSAPEG00000007830	srsf5b	89	96.935	Amphiprion_percula
ENSSDUG00000005766	srsf5b	92	96.552	ENSATEG00000019112	srsf5b	89	96.552	Anabas_testudineus
ENSSDUG00000005766	srsf5b	63	82.682	ENSAPLG00000014681	SRSF5	96	70.741	Anas_platyrhynchos
ENSSDUG00000005766	srsf5b	65	84.239	ENSACAG00000005143	SRSF5	96	73.704	Anolis_carolinensis
ENSSDUG00000005766	srsf5b	65	82.703	ENSANAG00000027977	-	100	70.714	Aotus_nancymaae
ENSSDUG00000005766	srsf5b	92	96.169	ENSACLG00000026424	srsf5b	89	96.169	Astatotilapia_calliptera
ENSSDUG00000005766	srsf5b	66	94.180	ENSAMXG00000011932	srsf5b	84	94.531	Astyanax_mexicanus
ENSSDUG00000005766	srsf5b	65	81.081	ENSBTAG00000011596	SRSF5	95	71.691	Bos_taurus
ENSSDUG00000005766	srsf5b	65	81.081	ENSCJAG00000014884	SRSF5	96	71.168	Callithrix_jacchus
ENSSDUG00000005766	srsf5b	65	81.081	ENSCAFG00000016589	SRSF5	95	71.691	Canis_familiaris
ENSSDUG00000005766	srsf5b	65	81.081	ENSCAFG00020005661	SRSF5	95	71.691	Canis_lupus_dingo
ENSSDUG00000005766	srsf5b	65	81.522	ENSCHIG00000016794	SRSF5	94	71.691	Capra_hircus
ENSSDUG00000005766	srsf5b	65	82.703	ENSTSYG00000007786	SRSF5	100	70.522	Carlito_syrichta
ENSSDUG00000005766	srsf5b	65	82.703	ENSCAPG00000008801	SRSF5	94	66.543	Cavia_aperea
ENSSDUG00000005766	srsf5b	65	82.703	ENSCPOG00000039926	SRSF5	94	72.059	Cavia_porcellus
ENSSDUG00000005766	srsf5b	65	82.703	ENSCCAG00000029002	SRSF5	100	70.714	Cebus_capucinus
ENSSDUG00000005766	srsf5b	65	82.258	ENSCATG00000045051	SRSF5	100	70.714	Cercocebus_atys
ENSSDUG00000005766	srsf5b	65	81.081	ENSCLAG00000004755	SRSF5	95	72.222	Chinchilla_lanigera
ENSSDUG00000005766	srsf5b	65	81.081	ENSCSAG00000013041	SRSF5	96	71.168	Chlorocebus_sabaeus
ENSSDUG00000005766	srsf5b	65	83.243	ENSCPBG00000021653	SRSF5	96	72.963	Chrysemys_picta_bellii
ENSSDUG00000005766	srsf5b	65	82.703	ENSCANG00000030560	SRSF5	100	70.714	Colobus_angolensis_palliatus
ENSSDUG00000005766	srsf5b	65	81.081	ENSCGRG00001015339	Srsf5	96	67.286	Cricetulus_griseus_chok1gshd
ENSSDUG00000005766	srsf5b	65	81.081	ENSCGRG00000009833	Srsf5	96	67.286	Cricetulus_griseus_crigri
ENSSDUG00000005766	srsf5b	87	94.400	ENSCSEG00000003801	srsf5b	90	90.875	Cynoglossus_semilaevis
ENSSDUG00000005766	srsf5b	92	86.380	ENSCVAG00000017240	srsf5b	86	86.022	Cyprinodon_variegatus
ENSSDUG00000005766	srsf5b	65	93.514	ENSDARG00000027734	srsf5b	90	93.750	Danio_rerio
ENSSDUG00000005766	srsf5b	65	81.522	ENSDNOG00000006160	SRSF5	95	72.119	Dasypus_novemcinctus
ENSSDUG00000005766	srsf5b	65	81.081	ENSDORG00000003989	Srsf5	96	65.428	Dipodomys_ordii
ENSSDUG00000005766	srsf5b	65	79.348	ENSETEG00000020396	SRSF5	96	63.806	Echinops_telfairi
ENSSDUG00000005766	srsf5b	66	62.755	ENSEBUG00000006229	srsf5b	69	63.351	Eptatretus_burgeri
ENSSDUG00000005766	srsf5b	65	81.081	ENSEASG00005016615	SRSF5	95	71.691	Equus_asinus_asinus
ENSSDUG00000005766	srsf5b	65	81.622	ENSECAG00000026873	SRSF5	95	71.691	Equus_caballus
ENSSDUG00000005766	srsf5b	66	93.814	ENSELUG00000019852	srsf5b	85	80.556	Esox_lucius
ENSSDUG00000005766	srsf5b	65	81.081	ENSFCAG00000008848	SRSF5	95	71.691	Felis_catus
ENSSDUG00000005766	srsf5b	65	82.609	ENSFALG00000004979	SRSF5	95	72.075	Ficedula_albicollis
ENSSDUG00000005766	srsf5b	80	68.282	ENSFDAG00000011562	SRSF5	96	72.794	Fukomys_damarensis
ENSSDUG00000005766	srsf5b	92	92.395	ENSFHEG00000009476	srsf5b	86	92.395	Fundulus_heteroclitus
ENSSDUG00000005766	srsf5b	66	80.531	ENSGMOG00000000595	srsf5b	99	80.531	Gadus_morhua
ENSSDUG00000005766	srsf5b	65	82.065	ENSGALG00000009421	SRSF5	90	73.846	Gallus_gallus
ENSSDUG00000005766	srsf5b	92	93.487	ENSGAFG00000002865	srsf5b	86	93.487	Gambusia_affinis
ENSSDUG00000005766	srsf5b	92	66.044	ENSGACG00000007834	srsf5b	86	83.824	Gasterosteus_aculeatus
ENSSDUG00000005766	srsf5b	65	83.243	ENSGAGG00000004447	SRSF5	96	72.963	Gopherus_agassizii
ENSSDUG00000005766	srsf5b	65	82.703	ENSGGOG00000016462	SRSF5	100	70.714	Gorilla_gorilla
ENSSDUG00000005766	srsf5b	92	95.785	ENSHBUG00000012462	srsf5b	93	99.219	Haplochromis_burtoni
ENSSDUG00000005766	srsf5b	65	80.978	ENSHGLG00000010147	SRSF5	96	71.324	Heterocephalus_glaber_female
ENSSDUG00000005766	srsf5b	65	80.978	ENSHGLG00100015328	SRSF5	96	71.324	Heterocephalus_glaber_male
ENSSDUG00000005766	srsf5b	77	51.261	ENSHGLG00100000095	-	62	60.000	Heterocephalus_glaber_male
ENSSDUG00000005766	srsf5b	66	88.021	ENSHCOG00000005592	srsf5b	66	86.979	Hippocampus_comes
ENSSDUG00000005766	srsf5b	65	81.081	ENSSTOG00000020672	SRSF5	96	71.691	Ictidomys_tridecemlineatus
ENSSDUG00000005766	srsf5b	65	81.081	ENSJJAG00000001688	Srsf5	95	65.809	Jaculus_jaculus
ENSSDUG00000005766	srsf5b	92	93.870	ENSKMAG00000020486	srsf5b	84	97.656	Kryptolebias_marmoratus
ENSSDUG00000005766	srsf5b	92	96.198	ENSLBEG00000013647	srsf5b	89	96.198	Labrus_bergylta
ENSSDUG00000005766	srsf5b	65	84.865	ENSLACG00000005874	SRSF5	96	73.801	Latimeria_chalumnae
ENSSDUG00000005766	srsf5b	65	87.302	ENSLOCG00000012438	srsf5b	86	74.380	Lepisosteus_oculatus
ENSSDUG00000005766	srsf5b	65	80.541	ENSLAFG00000005260	SRSF5	95	72.426	Loxodonta_africana
ENSSDUG00000005766	srsf5b	65	82.703	ENSMFAG00000002393	SRSF5	100	70.714	Macaca_fascicularis
ENSSDUG00000005766	srsf5b	65	82.703	ENSMNEG00000030872	SRSF5	100	70.714	Macaca_nemestrina
ENSSDUG00000005766	srsf5b	65	82.258	ENSMLEG00000030017	SRSF5	100	70.714	Mandrillus_leucophaeus
ENSSDUG00000005766	srsf5b	88	96.429	ENSMAMG00000002673	srsf5b	89	95.785	Mastacembelus_armatus
ENSSDUG00000005766	srsf5b	92	96.169	ENSMZEG00005003550	srsf5b	89	96.169	Maylandia_zebra
ENSSDUG00000005766	srsf5b	51	77.931	ENSMGAG00000011835	SRSF5	94	59.292	Meleagris_gallopavo
ENSSDUG00000005766	srsf5b	65	81.081	ENSMAUG00000009544	Srsf5	96	67.286	Mesocricetus_auratus
ENSSDUG00000005766	srsf5b	65	81.081	ENSMICG00000037432	-	73	91.667	Microcebus_murinus
ENSSDUG00000005766	srsf5b	65	81.522	ENSMOCG00000013134	Srsf5	96	67.658	Microtus_ochrogaster
ENSSDUG00000005766	srsf5b	65	96.757	ENSMMOG00000000137	srsf5b	80	95.385	Mola_mola
ENSSDUG00000005766	srsf5b	65	83.243	ENSMODG00000011362	SRSF5	96	72.593	Monodelphis_domestica
ENSSDUG00000005766	srsf5b	92	94.697	ENSMALG00000021875	srsf5b	84	99.225	Monopterus_albus
ENSSDUG00000005766	srsf5b	65	81.081	ENSMUSG00000021134	Srsf5	96	90.909	Mus_musculus
ENSSDUG00000005766	srsf5b	65	81.081	MGP_PahariEiJ_G0029659	Srsf5	96	67.286	Mus_pahari
ENSSDUG00000005766	srsf5b	65	81.081	ENSMPUG00000007458	SRSF5	95	71.691	Mustela_putorius_furo
ENSSDUG00000005766	srsf5b	65	82.703	ENSMLUG00000011939	SRSF5	94	66.296	Myotis_lucifugus
ENSSDUG00000005766	srsf5b	65	81.081	ENSNGAG00000010073	-	96	65.809	Nannospalax_galili
ENSSDUG00000005766	srsf5b	92	90.875	ENSNBRG00000001285	srsf5b	89	92.776	Neolamprologus_brichardi
ENSSDUG00000005766	srsf5b	65	82.703	ENSNLEG00000001615	SRSF5	100	70.714	Nomascus_leucogenys
ENSSDUG00000005766	srsf5b	65	82.703	ENSOPRG00000008286	SRSF5	94	66.421	Ochotona_princeps
ENSSDUG00000005766	srsf5b	65	79.891	ENSODEG00000000700	-	69	81.481	Octodon_degus
ENSSDUG00000005766	srsf5b	65	82.703	ENSODEG00000013469	-	96	72.222	Octodon_degus
ENSSDUG00000005766	srsf5b	92	96.169	ENSONIG00000005759	srsf5b	89	96.169	Oreochromis_niloticus
ENSSDUG00000005766	srsf5b	65	78.919	ENSOANG00000013336	SRSF5	96	68.750	Ornithorhynchus_anatinus
ENSSDUG00000005766	srsf5b	65	82.703	ENSOCUG00000009274	SRSF5	93	72.059	Oryctolagus_cuniculus
ENSSDUG00000005766	srsf5b	92	79.239	ENSORLG00000029854	srsf5b	90	77.163	Oryzias_latipes
ENSSDUG00000005766	srsf5b	92	90.494	ENSORLG00015001720	srsf5b	90	89.734	Oryzias_latipes_hsok
ENSSDUG00000005766	srsf5b	92	90.494	ENSOMEG00000020690	srsf5b	65	89.734	Oryzias_melastigma
ENSSDUG00000005766	srsf5b	65	82.703	ENSOGAG00000015122	SRSF5	93	72.830	Otolemur_garnettii
ENSSDUG00000005766	srsf5b	65	82.703	ENSPPAG00000029921	SRSF5	100	70.714	Pan_paniscus
ENSSDUG00000005766	srsf5b	65	81.081	ENSPPRG00000012903	SRSF5	95	71.691	Panthera_pardus
ENSSDUG00000005766	srsf5b	65	81.081	ENSPTIG00000018589	SRSF5	95	71.691	Panthera_tigris_altaica
ENSSDUG00000005766	srsf5b	65	82.703	ENSPTRG00000006488	SRSF5	100	70.714	Pan_troglodytes
ENSSDUG00000005766	srsf5b	65	82.258	ENSPANG00000021091	SRSF5	100	70.714	Papio_anubis
ENSSDUG00000005766	srsf5b	65	82.065	ENSPSIG00000012522	SRSF5	96	74.444	Pelodiscus_sinensis
ENSSDUG00000005766	srsf5b	65	81.081	ENSPEMG00000020173	Srsf5	96	67.286	Peromyscus_maniculatus_bairdii
ENSSDUG00000005766	srsf5b	66	63.131	ENSPMAG00000007790	srsf5b	86	55.094	Petromyzon_marinus
ENSSDUG00000005766	srsf5b	65	83.243	ENSPCIG00000011877	SRSF5	96	72.593	Phascolarctos_cinereus
ENSSDUG00000005766	srsf5b	92	93.487	ENSPFOG00000017700	srsf5b	86	93.487	Poecilia_formosa
ENSSDUG00000005766	srsf5b	92	92.748	ENSPLAG00000006480	srsf5b	86	90.840	Poecilia_latipinna
ENSSDUG00000005766	srsf5b	92	93.487	ENSPMEG00000012751	srsf5b	84	99.219	Poecilia_mexicana
ENSSDUG00000005766	srsf5b	92	93.487	ENSPREG00000010381	srsf5b	86	93.487	Poecilia_reticulata
ENSSDUG00000005766	srsf5b	65	81.081	ENSPPYG00000005945	SRSF5	96	71.168	Pongo_abelii
ENSSDUG00000005766	srsf5b	53	78.289	ENSPCAG00000004405	SRSF5	100	77.632	Procavia_capensis
ENSSDUG00000005766	srsf5b	65	81.081	ENSPCOG00000014442	SRSF5	96	71.691	Propithecus_coquereli
ENSSDUG00000005766	srsf5b	92	86.973	ENSPNYG00000002669	srsf5b	94	99.219	Pundamilia_nyererei
ENSSDUG00000005766	srsf5b	66	93.651	ENSPNAG00000011262	srsf5b	84	93.750	Pygocentrus_nattereri
ENSSDUG00000005766	srsf5b	65	81.081	ENSRNOG00000005513	Srsf5	96	67.286	Rattus_norvegicus
ENSSDUG00000005766	srsf5b	65	82.703	ENSRBIG00000013003	SRSF5	100	70.714	Rhinopithecus_bieti
ENSSDUG00000005766	srsf5b	65	82.703	ENSRROG00000043407	SRSF5	100	70.714	Rhinopithecus_roxellana
ENSSDUG00000005766	srsf5b	65	82.703	ENSSBOG00000030784	SRSF5	100	70.714	Saimiri_boliviensis_boliviensis
ENSSDUG00000005766	srsf5b	65	83.243	ENSSHAG00000002871	SRSF5	96	72.593	Sarcophilus_harrisii
ENSSDUG00000005766	srsf5b	92	84.828	ENSSMAG00000019728	srsf5b	89	85.172	Scophthalmus_maximus
ENSSDUG00000005766	srsf5b	92	100.000	ENSSLDG00000023255	srsf5b	89	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000005766	srsf5b	65	71.351	ENSSARG00000001059	SRSF5	96	61.397	Sorex_araneus
ENSSDUG00000005766	srsf5b	65	84.127	ENSSPUG00000002464	SRSF5	96	70.863	Sphenodon_punctatus
ENSSDUG00000005766	srsf5b	92	96.935	ENSSPAG00000015325	srsf5b	89	96.935	Stegastes_partitus
ENSSDUG00000005766	srsf5b	65	81.081	ENSSSCG00000032583	SRSF5	95	65.809	Sus_scrofa
ENSSDUG00000005766	srsf5b	65	82.609	ENSTGUG00000011425	SRSF5	93	72.901	Taeniopygia_guttata
ENSSDUG00000005766	srsf5b	66	94.681	ENSTRUG00000017811	srsf5b	93	76.289	Takifugu_rubripes
ENSSDUG00000005766	srsf5b	92	84.674	ENSTNIG00000016411	srsf5b	92	75.000	Tetraodon_nigroviridis
ENSSDUG00000005766	srsf5b	65	78.919	ENSTBEG00000001972	SRSF5	96	62.731	Tupaia_belangeri
ENSSDUG00000005766	srsf5b	64	81.421	ENSTTRG00000003318	SRSF5	94	71.587	Tursiops_truncatus
ENSSDUG00000005766	srsf5b	65	81.081	ENSUAMG00000014184	SRSF5	95	71.691	Ursus_americanus
ENSSDUG00000005766	srsf5b	65	90.625	ENSUMAG00000009827	SRSF5	95	65.428	Ursus_maritimus
ENSSDUG00000005766	srsf5b	65	81.081	ENSVPAG00000006448	SRSF5	96	71.691	Vicugna_pacos
ENSSDUG00000005766	srsf5b	65	81.081	ENSVVUG00000003790	SRSF5	95	71.691	Vulpes_vulpes
ENSSDUG00000005766	srsf5b	66	84.043	ENSXETG00000002211	srsf5	97	71.377	Xenopus_tropicalis
ENSSDUG00000005766	srsf5b	92	83.588	ENSXCOG00000001570	srsf5b	86	87.786	Xiphophorus_couchianus
ENSSDUG00000005766	srsf5b	92	92.748	ENSXMAG00000026416	srsf5b	84	98.450	Xiphophorus_maculatus