EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000005792 (Gene tree)
Gene ID: -
Gene Symbol: chd3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 13499 bases
Position: chrBDQW01000531.1:204288-217786
Accession: ZDB-GENE-121031-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000007960	ResIII	PF04851.15	2.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000008107	-	3204	-	ENSSDUP00000007960	1067 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000005792's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000005792's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000005792	chd3	96	62.847	ENSSDUG00000012051	-	53	65.476
ENSSDUG00000005792	chd3	91	68.756	ENSSDUG00000002891	chd4a	57	68.529
ENSSDUG00000005792	chd3	91	73.589	ENSSDUG00000017526	chd5	56	72.976

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000005792	chd3	95	73.535	ENSG00000170004	CHD3	98	64.436	Homo_sapiens
ENSSDUG00000005792	chd3	87	97.143	ENSAPOG00000005614	chd3	59	97.143	Acanthochromis_polyacanthus
ENSSDUG00000005792	chd3	87	90.510	ENSACIG00000019671	chd3	62	90.510	Amphilophus_citrinellus
ENSSDUG00000005792	chd3	96	90.826	ENSAOCG00000023784	chd3	61	92.049	Amphiprion_ocellaris
ENSSDUG00000005792	chd3	96	90.826	ENSAPEG00000006341	chd3	53	90.826	Amphiprion_percula
ENSSDUG00000005792	chd3	76	94.737	ENSATEG00000000848	chd3	59	86.694	Anabas_testudineus
ENSSDUG00000005792	chd3	96	75.484	ENSACAG00000004276	CHD3	53	75.207	Anolis_carolinensis
ENSSDUG00000005792	chd3	91	74.063	ENSANAG00000034323	CHD3	55	74.663	Aotus_nancymaae
ENSSDUG00000005792	chd3	96	91.033	ENSACLG00000009222	chd3	87	91.618	Astatotilapia_calliptera
ENSSDUG00000005792	chd3	95	73.486	ENSBTAG00000014377	CHD3	55	73.211	Bos_taurus
ENSSDUG00000005792	chd3	95	73.443	ENSCJAG00000014766	CHD3	56	72.480	Callithrix_jacchus
ENSSDUG00000005792	chd3	95	73.694	ENSCAFG00000016859	CHD3	54	73.327	Canis_familiaris
ENSSDUG00000005792	chd3	91	75.385	ENSCAFG00020007422	CHD3	56	75.410	Canis_lupus_dingo
ENSSDUG00000005792	chd3	95	73.535	ENSCHIG00000016737	CHD3	55	73.260	Capra_hircus
ENSSDUG00000005792	chd3	95	73.535	ENSTSYG00000035658	CHD3	56	72.570	Carlito_syrichta
ENSSDUG00000005792	chd3	95	69.322	ENSCAPG00000014864	CHD3	53	68.132	Cavia_aperea
ENSSDUG00000005792	chd3	95	73.718	ENSCPOG00000022653	CHD3	54	72.527	Cavia_porcellus
ENSSDUG00000005792	chd3	95	73.535	ENSCCAG00000034792	CHD3	55	72.570	Cebus_capucinus
ENSSDUG00000005792	chd3	95	73.535	ENSCATG00000041717	CHD3	56	72.570	Cercocebus_atys
ENSSDUG00000005792	chd3	95	73.260	ENSCLAG00000010523	CHD3	56	72.711	Chinchilla_lanigera
ENSSDUG00000005792	chd3	95	73.578	ENSCSAG00000011122	CHD3	56	72.793	Chlorocebus_sabaeus
ENSSDUG00000005792	chd3	96	79.767	ENSCPBG00000011966	CHD3	95	79.203	Chrysemys_picta_bellii
ENSSDUG00000005792	chd3	95	73.535	ENSCANG00000037641	CHD3	54	74.925	Colobus_angolensis_palliatus
ENSSDUG00000005792	chd3	95	72.344	ENSCGRG00001011306	Chd3	56	72.619	Cricetulus_griseus_chok1gshd
ENSSDUG00000005792	chd3	95	70.402	ENSCGRG00000007878	Chd3	52	80.918	Cricetulus_griseus_crigri
ENSSDUG00000005792	chd3	96	86.973	ENSCSEG00000004489	chd3	60	86.017	Cynoglossus_semilaevis
ENSSDUG00000005792	chd3	96	89.126	ENSCVAG00000007293	chd3	59	87.546	Cyprinodon_variegatus
ENSSDUG00000005792	chd3	96	82.788	ENSDARG00000021405	chd3	58	82.788	Danio_rerio
ENSSDUG00000005792	chd3	95	73.626	ENSDORG00000010713	Chd3	56	72.802	Dipodomys_ordii
ENSSDUG00000005792	chd3	95	66.026	ENSETEG00000017733	CHD3	57	65.486	Echinops_telfairi
ENSSDUG00000005792	chd3	88	75.474	ENSEASG00005019360	CHD3	55	75.573	Equus_asinus_asinus
ENSSDUG00000005792	chd3	88	75.474	ENSECAG00000010051	CHD3	55	75.573	Equus_caballus
ENSSDUG00000005792	chd3	95	67.125	ENSEEUG00000015205	CHD3	55	66.850	Erinaceus_europaeus
ENSSDUG00000005792	chd3	88	81.719	ENSELUG00000019499	chd3	64	81.287	Esox_lucius
ENSSDUG00000005792	chd3	95	73.718	ENSFCAG00000009629	CHD3	53	73.077	Felis_catus
ENSSDUG00000005792	chd3	91	75.096	ENSFDAG00000008220	CHD3	52	74.735	Fukomys_damarensis
ENSSDUG00000005792	chd3	88	75.239	ENSGMOG00000013599	chd3	53	86.496	Gadus_morhua
ENSSDUG00000005792	chd3	76	91.021	ENSGAFG00000004055	chd3	92	88.102	Gambusia_affinis
ENSSDUG00000005792	chd3	88	89.905	ENSGACG00000019275	chd3	52	88.671	Gasterosteus_aculeatus
ENSSDUG00000005792	chd3	78	83.413	ENSGAGG00000013164	CHD3	59	83.174	Gopherus_agassizii
ENSSDUG00000005792	chd3	95	73.443	ENSGGOG00000013496	CHD3	54	74.925	Gorilla_gorilla
ENSSDUG00000005792	chd3	95	73.260	ENSHGLG00000012017	CHD3	55	72.619	Heterocephalus_glaber_female
ENSSDUG00000005792	chd3	89	65.326	ENSHGLG00100013902	CHD3	61	63.594	Heterocephalus_glaber_male
ENSSDUG00000005792	chd3	96	84.664	ENSHCOG00000010170	chd3	55	83.394	Hippocampus_comes
ENSSDUG00000005792	chd3	88	84.917	ENSIPUG00000003271	chd3	57	85.300	Ictalurus_punctatus
ENSSDUG00000005792	chd3	95	73.443	ENSSTOG00000025907	CHD3	56	72.894	Ictidomys_tridecemlineatus
ENSSDUG00000005792	chd3	95	73.443	ENSJJAG00000017633	Chd3	56	72.619	Jaculus_jaculus
ENSSDUG00000005792	chd3	96	86.406	ENSKMAG00000019292	chd3	59	84.422	Kryptolebias_marmoratus
ENSSDUG00000005792	chd3	91	94.286	ENSLBEG00000028485	chd3	52	92.571	Labrus_bergylta
ENSSDUG00000005792	chd3	95	73.112	ENSLACG00000008031	CHD3	52	74.470	Latimeria_chalumnae
ENSSDUG00000005792	chd3	96	79.497	ENSLOCG00000013965	chd3	52	79.590	Lepisosteus_oculatus
ENSSDUG00000005792	chd3	95	73.845	ENSLAFG00000000572	CHD3	53	82.733	Loxodonta_africana
ENSSDUG00000005792	chd3	95	73.535	ENSMFAG00000020113	CHD3	55	75.025	Macaca_fascicularis
ENSSDUG00000005792	chd3	95	73.535	ENSMMUG00000022221	CHD3	56	72.570	Macaca_mulatta
ENSSDUG00000005792	chd3	95	73.535	ENSMNEG00000001728	CHD3	55	75.025	Macaca_nemestrina
ENSSDUG00000005792	chd3	95	73.535	ENSMLEG00000032249	CHD3	56	72.570	Mandrillus_leucophaeus
ENSSDUG00000005792	chd3	87	92.784	ENSMAMG00000000564	chd3	59	92.784	Mastacembelus_armatus
ENSSDUG00000005792	chd3	95	72.161	ENSMAUG00000013873	Chd3	54	74.598	Mesocricetus_auratus
ENSSDUG00000005792	chd3	95	73.535	ENSMICG00000008741	CHD3	53	72.570	Microcebus_murinus
ENSSDUG00000005792	chd3	95	72.344	ENSMOCG00000004848	Chd3	56	72.619	Microtus_ochrogaster
ENSSDUG00000005792	chd3	96	87.723	ENSMMOG00000012699	chd3	57	87.723	Mola_mola
ENSSDUG00000005792	chd3	88	75.125	ENSMODG00000007509	CHD3	55	75.125	Monodelphis_domestica
ENSSDUG00000005792	chd3	95	73.035	MGP_CAROLIEiJ_G0016564	Chd3	58	72.070	Mus_caroli
ENSSDUG00000005792	chd3	95	72.943	ENSMUSG00000018474	Chd3	58	72.161	Mus_musculus
ENSSDUG00000005792	chd3	95	73.285	MGP_PahariEiJ_G0017695	Chd3	58	72.919	Mus_pahari
ENSSDUG00000005792	chd3	95	73.035	MGP_SPRETEiJ_G0017400	Chd3	58	72.161	Mus_spretus
ENSSDUG00000005792	chd3	95	72.761	ENSMLUG00000014643	-	54	72.619	Myotis_lucifugus
ENSSDUG00000005792	chd3	95	73.168	ENSNGAG00000000773	Chd3	54	72.619	Nannospalax_galili
ENSSDUG00000005792	chd3	88	89.386	ENSNBRG00000000636	chd3	58	89.386	Neolamprologus_brichardi
ENSSDUG00000005792	chd3	95	72.936	ENSNLEG00000009770	CHD3	57	71.844	Nomascus_leucogenys
ENSSDUG00000005792	chd3	91	74.327	ENSOPRG00000011069	CHD3	55	73.867	Ochotona_princeps
ENSSDUG00000005792	chd3	95	73.260	ENSODEG00000017785	CHD3	55	72.527	Octodon_degus
ENSSDUG00000005792	chd3	96	89.416	ENSONIG00000009292	chd3	57	89.416	Oreochromis_niloticus
ENSSDUG00000005792	chd3	95	71.912	ENSOCUG00000029299	CHD3	55	70.906	Oryctolagus_cuniculus
ENSSDUG00000005792	chd3	95	85.660	ENSORLG00000007107	chd3	63	85.660	Oryzias_latipes
ENSSDUG00000005792	chd3	96	91.868	ENSORLG00020008387	chd3	92	92.546	Oryzias_latipes_hni
ENSSDUG00000005792	chd3	83	98.734	ENSOMEG00000013691	chd3	59	89.322	Oryzias_melastigma
ENSSDUG00000005792	chd3	95	73.535	ENSOGAG00000003216	CHD3	56	72.389	Otolemur_garnettii
ENSSDUG00000005792	chd3	95	72.558	ENSOARG00000017855	CHD3	54	72.465	Ovis_aries
ENSSDUG00000005792	chd3	95	73.168	ENSPPAG00000032886	CHD3	54	74.625	Pan_paniscus
ENSSDUG00000005792	chd3	95	73.626	ENSPPRG00000000626	CHD3	55	73.077	Panthera_pardus
ENSSDUG00000005792	chd3	95	73.535	ENSPTRG00000008714	CHD3	54	74.925	Pan_troglodytes
ENSSDUG00000005792	chd3	95	73.535	ENSPANG00000023938	CHD3	55	75.025	Papio_anubis
ENSSDUG00000005792	chd3	90	94.000	ENSPKIG00000006305	chd3	55	94.000	Paramormyrops_kingsleyae
ENSSDUG00000005792	chd3	76	83.026	ENSPSIG00000010177	CHD3	78	80.485	Pelodiscus_sinensis
ENSSDUG00000005792	chd3	95	72.344	ENSPEMG00000014262	Chd3	55	72.619	Peromyscus_maniculatus_bairdii
ENSSDUG00000005792	chd3	87	82.893	ENSPCIG00000005442	CHD3	58	75.644	Phascolarctos_cinereus
ENSSDUG00000005792	chd3	76	91.986	ENSPFOG00000012464	chd3	51	85.636	Poecilia_formosa
ENSSDUG00000005792	chd3	96	91.448	ENSPLAG00000002887	chd3	89	91.448	Poecilia_latipinna
ENSSDUG00000005792	chd3	96	92.031	ENSPMEG00000016725	chd3	89	92.031	Poecilia_mexicana
ENSSDUG00000005792	chd3	76	92.512	ENSPREG00000011044	chd3	58	89.116	Poecilia_reticulata
ENSSDUG00000005792	chd3	95	71.691	ENSPPYG00000007940	CHD3	55	70.772	Pongo_abelii
ENSSDUG00000005792	chd3	88	86.148	ENSPCAG00000004350	CHD3	52	86.148	Procavia_capensis
ENSSDUG00000005792	chd3	95	73.535	ENSPCOG00000020952	CHD3	55	72.570	Propithecus_coquereli
ENSSDUG00000005792	chd3	96	84.935	ENSPNAG00000020393	chd3	58	85.772	Pygocentrus_nattereri
ENSSDUG00000005792	chd3	88	74.776	ENSRNOG00000009722	Chd3	54	74.078	Rattus_norvegicus
ENSSDUG00000005792	chd3	95	73.921	ENSRBIG00000033562	CHD3	54	75.755	Rhinopithecus_bieti
ENSSDUG00000005792	chd3	95	73.535	ENSRROG00000029554	CHD3	54	75.025	Rhinopithecus_roxellana
ENSSDUG00000005792	chd3	95	73.535	ENSSBOG00000020719	CHD3	55	75.025	Saimiri_boliviensis_boliviensis
ENSSDUG00000005792	chd3	95	73.917	ENSSHAG00000014412	CHD3	56	72.811	Sarcophilus_harrisii
ENSSDUG00000005792	chd3	81	90.532	ENSSFOG00015023123	chd3	51	90.532	Scleropages_formosus
ENSSDUG00000005792	chd3	87	91.152	ENSSMAG00000006451	chd3	59	91.152	Scophthalmus_maximus
ENSSDUG00000005792	chd3	96	90.917	ENSSPAG00000013694	chd3	62	92.000	Stegastes_partitus
ENSSDUG00000005792	chd3	95	73.853	ENSSSCG00000021363	CHD3	58	75.624	Sus_scrofa
ENSSDUG00000005792	chd3	96	87.418	ENSTRUG00000014990	chd3	65	86.007	Takifugu_rubripes
ENSSDUG00000005792	chd3	96	84.672	ENSTNIG00000012998	chd3	56	83.670	Tetraodon_nigroviridis
ENSSDUG00000005792	chd3	77	68.274	ENSTBEG00000011454	-	50	68.274	Tupaia_belangeri
ENSSDUG00000005792	chd3	95	72.848	ENSUAMG00000005475	CHD3	58	71.935	Ursus_americanus
ENSSDUG00000005792	chd3	95	73.694	ENSVVUG00000028011	CHD3	54	75.410	Vulpes_vulpes
ENSSDUG00000005792	chd3	96	87.439	ENSXCOG00000000809	chd3	89	87.634	Xiphophorus_couchianus
ENSSDUG00000005792	chd3	76	91.184	ENSXMAG00000016035	chd3	63	87.718	Xiphophorus_maculatus