EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000005833 (Gene tree)
Gene ID: 111238915
Gene Symbol: atxn2l
Alias: wu:fc31f08|wu:fi19h05|zgc:66471
Full Name: ataxin 2 like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 12201 bases
Position: chrBDQW01001787.1:20278-32478
Accession: 111238915
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000007956	PAM2	PF07145.15	0.00021	1	1
ENSSDUP00000007956	LsmAD	PF06741.13	7.3e-18	1	1
ENSSDUP00000007987	LsmAD	PF06741.13	8e-18	1	1
ENSSDUP00000007987	SM-ATX	PF14438.6	6.5e-21	1	1
ENSSDUP00000007956	SM-ATX	PF14438.6	2.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000008134	-	3574	XM_022768636	ENSSDUP00000007987	1055 (aa)	XP_022624357	-
ENSSDUT00000008103	-	3368	XM_022768637	ENSSDUP00000007956	985 (aa)	XP_022624358	-

Gene Model

Click here to download ENSSDUG00000005833's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000005833's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000005833	atxn2l	98	42.197	ENSG00000168488	ATXN2L	100	56.731	Homo_sapiens
ENSSDUG00000005833	atxn2l	99	82.437	ENSAPOG00000010103	atxn2l	51	84.263	Acanthochromis_polyacanthus
ENSSDUG00000005833	atxn2l	78	53.553	ENSACIG00000014731	-	95	52.538	Amphilophus_citrinellus
ENSSDUG00000005833	atxn2l	94	71.078	ENSACIG00000024435	atxn2l	92	77.867	Amphilophus_citrinellus
ENSSDUG00000005833	atxn2l	97	82.139	ENSAOCG00000011378	atxn2l	99	82.316	Amphiprion_ocellaris
ENSSDUG00000005833	atxn2l	99	82.538	ENSAPEG00000005810	atxn2l	100	82.204	Amphiprion_percula
ENSSDUG00000005833	atxn2l	79	80.051	ENSATEG00000017689	atxn2l	98	80.355	Anabas_testudineus
ENSSDUG00000005833	atxn2l	94	69.760	ENSACLG00000016900	atxn2l	95	66.032	Astatotilapia_calliptera
ENSSDUG00000005833	atxn2l	88	70.690	ENSAMXG00000003332	atxn2l	50	62.899	Astyanax_mexicanus
ENSSDUG00000005833	atxn2l	99	54.971	ENSAMXG00000020362	-	50	52.908	Astyanax_mexicanus
ENSSDUG00000005833	atxn2l	99	60.117	ENSDARG00000011597	atxn2l	96	58.563	Danio_rerio
ENSSDUG00000005833	atxn2l	98	42.559	ENSEASG00005014992	ATXN2L	70	59.854	Equus_asinus_asinus
ENSSDUG00000005833	atxn2l	99	66.231	ENSELUG00000023740	atxn2l	100	65.300	Esox_lucius
ENSSDUG00000005833	atxn2l	61	70.732	ENSGMOG00000000316	atxn2l	79	70.213	Gadus_morhua
ENSSDUG00000005833	atxn2l	98	52.249	ENSGACG00000007446	-	51	54.159	Gasterosteus_aculeatus
ENSSDUG00000005833	atxn2l	97	40.171	ENSGAGG00000006078	ATXN2L	56	62.977	Gopherus_agassizii
ENSSDUG00000005833	atxn2l	95	34.690	ENSGGOG00000036669	-	57	51.240	Gorilla_gorilla
ENSSDUG00000005833	atxn2l	99	75.405	ENSHBUG00000013425	atxn2l	100	73.812	Haplochromis_burtoni
ENSSDUG00000005833	atxn2l	99	61.725	ENSIPUG00000001761	atxn2l	97	59.291	Ictalurus_punctatus
ENSSDUG00000005833	atxn2l	99	53.421	ENSMAMG00000013005	-	50	53.049	Mastacembelus_armatus
ENSSDUG00000005833	atxn2l	99	81.827	ENSMAMG00000017977	atxn2l	99	81.929	Mastacembelus_armatus
ENSSDUG00000005833	atxn2l	91	70.435	ENSMZEG00005001258	atxn2l	96	66.848	Maylandia_zebra
ENSSDUG00000005833	atxn2l	95	50.964	ENSMMOG00000001440	-	52	54.158	Mola_mola
ENSSDUG00000005833	atxn2l	83	55.603	ENSMALG00000008430	-	92	53.608	Monopterus_albus
ENSSDUG00000005833	atxn2l	98	41.867	MGP_CAROLIEiJ_G0030450	Atxn2l	88	58.095	Mus_caroli
ENSSDUG00000005833	atxn2l	98	41.731	ENSMUSG00000032637	Atxn2l	88	58.095	Mus_musculus
ENSSDUG00000005833	atxn2l	98	41.827	MGP_SPRETEiJ_G0031564	Atxn2l	88	58.095	Mus_spretus
ENSSDUG00000005833	atxn2l	79	70.013	ENSNBRG00000020833	-	60	75.641	Neolamprologus_brichardi
ENSSDUG00000005833	atxn2l	93	35.805	ENSNLEG00000033414	-	57	47.857	Nomascus_leucogenys
ENSSDUG00000005833	atxn2l	78	60.000	ENSMEUG00000011098	ATXN2L	60	61.029	Notamacropus_eugenii
ENSSDUG00000005833	atxn2l	99	74.393	ENSONIG00000009388	atxn2l	100	73.003	Oreochromis_niloticus
ENSSDUG00000005833	atxn2l	99	53.688	ENSORLG00000006059	-	52	52.531	Oryzias_latipes
ENSSDUG00000005833	atxn2l	99	53.688	ENSORLG00020000991	-	52	52.531	Oryzias_latipes_hni
ENSSDUG00000005833	atxn2l	99	54.248	ENSORLG00015014174	-	52	52.356	Oryzias_latipes_hsok
ENSSDUG00000005833	atxn2l	99	52.607	ENSOMEG00000021118	-	52	52.174	Oryzias_melastigma
ENSSDUG00000005833	atxn2l	91	37.580	ENSPPAG00000036236	-	64	51.653	Pan_paniscus
ENSSDUG00000005833	atxn2l	71	62.899	ENSPMGG00000014821	-	83	67.857	Periophthalmus_magnuspinnatus
ENSSDUG00000005833	atxn2l	89	80.769	ENSPVAG00000003958	ATXN2L	53	80.769	Pteropus_vampyrus
ENSSDUG00000005833	atxn2l	83	76.471	ENSPNYG00000012482	atxn2l	94	73.315	Pundamilia_nyererei
ENSSDUG00000005833	atxn2l	84	74.408	ENSSMAG00000016365	atxn2l	97	72.090	Scophthalmus_maximus
ENSSDUG00000005833	atxn2l	73	62.121	ENSSLDG00000017701	-	61	68.914	Seriola_lalandi_dorsalis
ENSSDUG00000005833	atxn2l	98	39.027	ENSUMAG00000009437	ATXN2L	75	62.357	Ursus_maritimus