EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000005847 (Gene tree)
Gene ID: 111240059
Gene Symbol: eif5b
Alias: im:6912504|si:ch211-254d18.3
Full Name: eukaryotic translation initiation factor 5B
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 8054 bases
Position: chrBDQW01009202.1:90551-98604
Accession: 111240059
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000008026	IF-2	PF11987.8	4.1e-19	1	1
ENSSDUP00000008026	GTP_EFTU	PF00009.27	3.8e-34	1	1
ENSSDUP00000008026	MMR_HSR1	PF01926.23	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000008173	-	3036	XM_022770041	ENSSDUP00000008026	1011 (aa)	XP_022625762	-

Gene Model

Click here to download ENSSDUG00000005847's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000005847's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000005847	eif5b	80	89.396	ENSAPOG00000004375	eif5b	70	89.663	Acanthochromis_polyacanthus
ENSSDUG00000005847	eif5b	98	86.660	ENSACIG00000024324	eif5b	92	85.934	Amphilophus_citrinellus
ENSSDUG00000005847	eif5b	80	90.541	ENSAOCG00000018386	eif5b	70	90.288	Amphiprion_ocellaris
ENSSDUG00000005847	eif5b	80	85.505	ENSATEG00000011259	eif5b	80	86.967	Anabas_testudineus
ENSSDUG00000005847	eif5b	86	95.854	ENSATEG00000011451	-	95	73.300	Anabas_testudineus
ENSSDUG00000005847	eif5b	80	92.883	ENSATEG00000006765	eif5b	68	93.182	Anabas_testudineus
ENSSDUG00000005847	eif5b	81	78.219	ENSACAG00000008305	-	71	78.504	Anolis_carolinensis
ENSSDUG00000005847	eif5b	80	83.194	ENSACLG00000005530	eif5b	83	83.391	Astatotilapia_calliptera
ENSSDUG00000005847	eif5b	82	84.353	ENSAMXG00000018383	eif5b	70	83.825	Astyanax_mexicanus
ENSSDUG00000005847	eif5b	61	58.199	WBGene00021857	iffb-1	74	50.366	Caenorhabditis_elegans
ENSSDUG00000005847	eif5b	78	71.824	ENSCJAG00000009960	-	67	71.845	Callithrix_jacchus
ENSSDUG00000005847	eif5b	80	72.515	ENSCAPG00000014619	-	69	72.727	Cavia_aperea
ENSSDUG00000005847	eif5b	80	77.045	ENSCPOG00000011967	-	69	77.170	Cavia_porcellus
ENSSDUG00000005847	eif5b	66	65.243	ENSCHOG00000002137	-	55	79.954	Choloepus_hoffmanni
ENSSDUG00000005847	eif5b	82	85.781	ENSCSEG00000014153	eif5b	70	86.407	Cynoglossus_semilaevis
ENSSDUG00000005847	eif5b	80	88.307	ENSCVAG00000019619	eif5b	71	87.559	Cyprinodon_variegatus
ENSSDUG00000005847	eif5b	61	69.657	FBgn0026259	eIF5B	68	59.653	Drosophila_melanogaster
ENSSDUG00000005847	eif5b	80	81.158	ENSGMOG00000002031	eif5b	69	80.665	Gadus_morhua
ENSSDUG00000005847	eif5b	85	93.803	ENSGAFG00000000088	eif5b	78	93.803	Gambusia_affinis
ENSSDUG00000005847	eif5b	64	90.965	ENSGACG00000010536	eif5b	89	91.512	Gasterosteus_aculeatus
ENSSDUG00000005847	eif5b	65	84.451	ENSGAGG00000022242	-	92	87.138	Gopherus_agassizii
ENSSDUG00000005847	eif5b	80	91.626	ENSHBUG00000023319	eif5b	69	90.986	Haplochromis_burtoni
ENSSDUG00000005847	eif5b	82	85.562	ENSHCOG00000002807	eif5b	75	82.071	Hippocampus_comes
ENSSDUG00000005847	eif5b	82	82.409	ENSIPUG00000020910	eif5b	72	83.115	Ictalurus_punctatus
ENSSDUG00000005847	eif5b	80	89.189	ENSKMAG00000004325	eif5b	70	89.820	Kryptolebias_marmoratus
ENSSDUG00000005847	eif5b	99	81.179	ENSLBEG00000027090	eif5b	79	88.796	Labrus_bergylta
ENSSDUG00000005847	eif5b	62	86.783	ENSLACG00000011688	eif5b	70	79.250	Latimeria_chalumnae
ENSSDUG00000005847	eif5b	82	85.613	ENSMAMG00000022568	eif5b	70	90.747	Mastacembelus_armatus
ENSSDUG00000005847	eif5b	80	91.626	ENSMZEG00005012696	eif5b	69	90.986	Maylandia_zebra
ENSSDUG00000005847	eif5b	80	78.747	ENSMODG00000001387	-	52	86.977	Monodelphis_domestica
ENSSDUG00000005847	eif5b	82	89.442	ENSMALG00000005862	eif5b	70	90.095	Monopterus_albus
ENSSDUG00000005847	eif5b	82	90.036	ENSNBRG00000021912	eif5b	90	84.016	Neolamprologus_brichardi
ENSSDUG00000005847	eif5b	87	85.315	ENSMEUG00000007080	-	59	85.315	Notamacropus_eugenii
ENSSDUG00000005847	eif5b	95	90.887	ENSONIG00000018749	eif5b	69	90.876	Oreochromis_niloticus
ENSSDUG00000005847	eif5b	99	66.038	ENSOANG00000004621	-	53	87.460	Ornithorhynchus_anatinus
ENSSDUG00000005847	eif5b	80	77.927	ENSOCUG00000021154	-	69	78.504	Oryctolagus_cuniculus
ENSSDUG00000005847	eif5b	80	89.122	ENSORLG00000001525	eif5b	70	89.398	Oryzias_latipes
ENSSDUG00000005847	eif5b	80	89.246	ENSORLG00020005327	eif5b	70	89.639	Oryzias_latipes_hni
ENSSDUG00000005847	eif5b	80	88.752	ENSORLG00015008949	eif5b	70	89.036	Oryzias_latipes_hsok
ENSSDUG00000005847	eif5b	78	88.691	ENSOMEG00000016539	eif5b	99	87.437	Oryzias_melastigma
ENSSDUG00000005847	eif5b	82	84.179	ENSPKIG00000011133	eif5b	69	83.471	Paramormyrops_kingsleyae
ENSSDUG00000005847	eif5b	61	77.621	ENSPSIG00000014914	-	89	77.211	Pelodiscus_sinensis
ENSSDUG00000005847	eif5b	82	66.271	ENSPMAG00000004508	eif5b	69	66.271	Petromyzon_marinus
ENSSDUG00000005847	eif5b	72	89.782	ENSPFOG00000007543	eif5b	100	90.191	Poecilia_formosa
ENSSDUG00000005847	eif5b	80	89.877	ENSPLAG00000015913	eif5b	70	90.493	Poecilia_latipinna
ENSSDUG00000005847	eif5b	80	90.012	ENSPMEG00000006712	eif5b	70	90.505	Poecilia_mexicana
ENSSDUG00000005847	eif5b	77	71.178	ENSPCAG00000007829	-	65	71.013	Procavia_capensis
ENSSDUG00000005847	eif5b	80	74.424	ENSPCOG00000019508	-	99	86.129	Propithecus_coquereli
ENSSDUG00000005847	eif5b	80	90.418	ENSPNYG00000021051	eif5b	85	85.265	Pundamilia_nyererei
ENSSDUG00000005847	eif5b	82	83.844	ENSPNAG00000023852	eif5b	69	84.935	Pygocentrus_nattereri
ENSSDUG00000005847	eif5b	67	47.714	YAL035W	FUN12	60	51.163	Saccharomyces_cerevisiae
ENSSDUG00000005847	eif5b	62	92.616	ENSSFOG00015000594	eif5b	69	84.888	Scleropages_formosus
ENSSDUG00000005847	eif5b	94	82.895	ENSSMAG00000000045	eif5b	80	88.942	Scophthalmus_maximus
ENSSDUG00000005847	eif5b	100	97.626	ENSSLDG00000013738	eif5b	100	97.626	Seriola_lalandi_dorsalis
ENSSDUG00000005847	eif5b	95	77.766	ENSSPAG00000005335	eif5b	80	82.266	Stegastes_partitus
ENSSDUG00000005847	eif5b	80	83.234	ENSTNIG00000006580	eif5b	89	84.856	Tetraodon_nigroviridis
ENSSDUG00000005847	eif5b	58	90.830	ENSTBEG00000009133	-	52	90.830	Tupaia_belangeri
ENSSDUG00000005847	eif5b	81	76.077	ENSXETG00000019377	eif5b	53	86.174	Xenopus_tropicalis
ENSSDUG00000005847	eif5b	82	87.770	ENSXCOG00000016681	eif5b	89	87.946	Xiphophorus_couchianus
ENSSDUG00000005847	eif5b	82	87.981	ENSXMAG00000001002	eif5b	89	88.163	Xiphophorus_maculatus