EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000005878 (Gene tree)
Gene ID: -
Gene Symbol: zmat4a
Alias: si:dkey-173g15.1
Full Name: zinc finger matrin-type 4
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 142315 bases
Position: chrBDQW01000017.1:11066735-11209049
Accession: 111227441
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000008027	zf-met	PF12874.7	1.1e-31	1	4
ENSSDUP00000008027	zf-met	PF12874.7	1.1e-31	2	4
ENSSDUP00000008027	zf-met	PF12874.7	1.1e-31	3	4
ENSSDUP00000008027	zf-met	PF12874.7	1.1e-31	4	4
ENSSDUP00000008047	zf-met	PF12874.7	2.2e-31	1	4
ENSSDUP00000008047	zf-met	PF12874.7	2.2e-31	2	4
ENSSDUP00000008047	zf-met	PF12874.7	2.2e-31	3	4
ENSSDUP00000008047	zf-met	PF12874.7	2.2e-31	4	4
ENSSDUP00000008019	zf-met	PF12874.7	2.3e-31	1	4
ENSSDUP00000008019	zf-met	PF12874.7	2.3e-31	2	4
ENSSDUP00000008019	zf-met	PF12874.7	2.3e-31	3	4
ENSSDUP00000008019	zf-met	PF12874.7	2.3e-31	4	4
ENSSDUP00000008059	zf-met	PF12874.7	2.7e-31	1	4
ENSSDUP00000008059	zf-met	PF12874.7	2.7e-31	2	4
ENSSDUP00000008059	zf-met	PF12874.7	2.7e-31	3	4
ENSSDUP00000008059	zf-met	PF12874.7	2.7e-31	4	4
ENSSDUP00000008037	zf-met	PF12874.7	4e-22	1	3
ENSSDUP00000008037	zf-met	PF12874.7	4e-22	2	3
ENSSDUP00000008037	zf-met	PF12874.7	4e-22	3	3
ENSSDUP00000008027	zf-C2H2_jaz	PF12171.8	1.8e-24	1	2
ENSSDUP00000008027	zf-C2H2_jaz	PF12171.8	1.8e-24	2	2
ENSSDUP00000008047	zf-C2H2_jaz	PF12171.8	3.8e-24	1	2
ENSSDUP00000008047	zf-C2H2_jaz	PF12171.8	3.8e-24	2	2
ENSSDUP00000008019	zf-C2H2_jaz	PF12171.8	3.8e-24	1	2
ENSSDUP00000008019	zf-C2H2_jaz	PF12171.8	3.8e-24	2	2
ENSSDUP00000008059	zf-C2H2_jaz	PF12171.8	5.4e-24	1	2
ENSSDUP00000008059	zf-C2H2_jaz	PF12171.8	5.4e-24	2	2
ENSSDUP00000008037	zf-C2H2_jaz	PF12171.8	1.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000008174	-	5433	XM_022752943	ENSSDUP00000008027	260 (aa)	XP_022608664	UPI000C6F4993
ENSSDUT00000008184	-	5314	-	ENSSDUP00000008037	226 (aa)	-	-
ENSSDUT00000008195	-	5492	-	ENSSDUP00000008047	296 (aa)	-	-
ENSSDUT00000008166	-	5536	-	ENSSDUP00000008019	300 (aa)	-	-
ENSSDUT00000008206	-	1088	-	ENSSDUP00000008059	322 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000005878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000005878's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000005878	zmat4a	63	70.940	ENSSDUG00000008773	zgc:171482	84	70.940
ENSSDUG00000005878	zmat4a	60	35.878	ENSSDUG00000016188	zmat3	70	35.606
ENSSDUG00000005878	zmat4a	83	42.424	ENSSDUG00000000468	znf346	76	40.230

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000005878	zmat4a	87	76.856	ENSG00000165061	ZMAT4	97	80.537	Homo_sapiens
ENSSDUG00000005878	zmat4a	76	79.798	ENSAPOG00000007448	zmat4a	97	79.798	Acanthochromis_polyacanthus
ENSSDUG00000005878	zmat4a	85	76.339	ENSAMEG00000002758	ZMAT4	99	76.339	Ailuropoda_melanoleuca
ENSSDUG00000005878	zmat4a	85	93.243	ENSACIG00000009080	zmat4a	99	93.243	Amphilophus_citrinellus
ENSSDUG00000005878	zmat4a	100	100.000	ENSAOCG00000004416	zmat4a	100	100.000	Amphiprion_ocellaris
ENSSDUG00000005878	zmat4a	100	99.615	ENSAPEG00000018565	zmat4a	100	99.615	Amphiprion_percula
ENSSDUG00000005878	zmat4a	97	98.008	ENSATEG00000012630	zmat4a	95	98.008	Anabas_testudineus
ENSSDUG00000005878	zmat4a	87	78.603	ENSAPLG00000006106	ZMAT4	100	78.603	Anas_platyrhynchos
ENSSDUG00000005878	zmat4a	85	77.833	ENSACAG00000005388	ZMAT4	97	77.833	Anolis_carolinensis
ENSSDUG00000005878	zmat4a	87	76.856	ENSANAG00000027926	ZMAT4	97	80.537	Aotus_nancymaae
ENSSDUG00000005878	zmat4a	100	96.923	ENSACLG00000005038	zmat4a	100	96.923	Astatotilapia_calliptera
ENSSDUG00000005878	zmat4a	85	90.991	ENSAMXG00000035337	zmat4a	99	90.991	Astyanax_mexicanus
ENSSDUG00000005878	zmat4a	87	75.983	ENSBTAG00000017420	ZMAT4	100	75.983	Bos_taurus
ENSSDUG00000005878	zmat4a	87	75.652	ENSCAFG00000005744	ZMAT4	100	75.652	Canis_familiaris
ENSSDUG00000005878	zmat4a	62	70.303	ENSCAFG00020002716	ZMAT4	96	70.303	Canis_lupus_dingo
ENSSDUG00000005878	zmat4a	87	76.419	ENSCHIG00000022017	ZMAT4	100	76.419	Capra_hircus
ENSSDUG00000005878	zmat4a	63	73.333	ENSTSYG00000031413	ZMAT4	100	73.333	Carlito_syrichta
ENSSDUG00000005878	zmat4a	87	75.546	ENSCAPG00000014401	ZMAT4	100	75.546	Cavia_aperea
ENSSDUG00000005878	zmat4a	87	75.546	ENSCPOG00000015224	ZMAT4	100	75.546	Cavia_porcellus
ENSSDUG00000005878	zmat4a	87	76.856	ENSCCAG00000027437	ZMAT4	97	80.537	Cebus_capucinus
ENSSDUG00000005878	zmat4a	87	76.856	ENSCATG00000044978	ZMAT4	97	80.537	Cercocebus_atys
ENSSDUG00000005878	zmat4a	87	75.983	ENSCLAG00000000923	ZMAT4	100	75.983	Chinchilla_lanigera
ENSSDUG00000005878	zmat4a	85	77.130	ENSCSAG00000015108	ZMAT4	100	76.786	Chlorocebus_sabaeus
ENSSDUG00000005878	zmat4a	87	64.035	ENSCHOG00000003755	ZMAT4	98	84.348	Choloepus_hoffmanni
ENSSDUG00000005878	zmat4a	52	85.470	ENSCPBG00000002781	ZMAT4	81	80.159	Chrysemys_picta_bellii
ENSSDUG00000005878	zmat4a	74	74.872	ENSCANG00000032136	ZMAT4	100	74.872	Colobus_angolensis_palliatus
ENSSDUG00000005878	zmat4a	87	76.419	ENSCGRG00001016583	Zmat4	100	76.419	Cricetulus_griseus_chok1gshd
ENSSDUG00000005878	zmat4a	87	76.419	ENSCGRG00000002696	Zmat4	100	76.419	Cricetulus_griseus_crigri
ENSSDUG00000005878	zmat4a	100	94.231	ENSCSEG00000013707	zmat4a	100	96.170	Cynoglossus_semilaevis
ENSSDUG00000005878	zmat4a	100	94.231	ENSCVAG00000000113	zmat4a	100	94.231	Cyprinodon_variegatus
ENSSDUG00000005878	zmat4a	85	80.804	ENSDARG00000061419	zmat4b	99	80.804	Danio_rerio
ENSSDUG00000005878	zmat4a	100	88.889	ENSDARG00000092987	zmat4a	99	96.622	Danio_rerio
ENSSDUG00000005878	zmat4a	85	76.786	ENSDNOG00000001045	ZMAT4	100	76.444	Dasypus_novemcinctus
ENSSDUG00000005878	zmat4a	87	76.419	ENSDORG00000009300	Zmat4	100	76.419	Dipodomys_ordii
ENSSDUG00000005878	zmat4a	60	74.684	ENSETEG00000010474	ZMAT4	81	74.684	Echinops_telfairi
ENSSDUG00000005878	zmat4a	87	75.983	ENSEASG00005010447	ZMAT4	100	75.983	Equus_asinus_asinus
ENSSDUG00000005878	zmat4a	87	76.419	ENSECAG00000021550	ZMAT4	100	76.419	Equus_caballus
ENSSDUG00000005878	zmat4a	85	65.919	ENSEEUG00000002565	ZMAT4	100	65.625	Erinaceus_europaeus
ENSSDUG00000005878	zmat4a	100	95.000	ENSELUG00000005097	zmat4a	100	95.000	Esox_lucius
ENSSDUG00000005878	zmat4a	87	76.957	ENSFCAG00000012775	ZMAT4	97	80.537	Felis_catus
ENSSDUG00000005878	zmat4a	87	79.736	ENSFALG00000006455	ZMAT4	100	79.736	Ficedula_albicollis
ENSSDUG00000005878	zmat4a	87	74.672	ENSFDAG00000015258	ZMAT4	97	74.672	Fukomys_damarensis
ENSSDUG00000005878	zmat4a	86	90.541	ENSFHEG00000022872	zmat4b	99	90.541	Fundulus_heteroclitus
ENSSDUG00000005878	zmat4a	85	94.144	ENSGMOG00000007950	zmat4a	100	94.144	Gadus_morhua
ENSSDUG00000005878	zmat4a	87	78.947	ENSGALG00000003470	ZMAT4	100	78.947	Gallus_gallus
ENSSDUG00000005878	zmat4a	100	92.692	ENSGAFG00000013149	zmat4a	100	92.692	Gambusia_affinis
ENSSDUG00000005878	zmat4a	87	97.797	ENSGACG00000005515	zmat4a	100	97.797	Gasterosteus_aculeatus
ENSSDUG00000005878	zmat4a	87	80.786	ENSGAGG00000004799	ZMAT4	100	80.786	Gopherus_agassizii
ENSSDUG00000005878	zmat4a	87	76.856	ENSGGOG00000006633	ZMAT4	97	80.537	Gorilla_gorilla
ENSSDUG00000005878	zmat4a	100	97.308	ENSHBUG00000012634	zmat4a	100	97.308	Haplochromis_burtoni
ENSSDUG00000005878	zmat4a	87	75.546	ENSHGLG00000003246	ZMAT4	100	75.546	Heterocephalus_glaber_female
ENSSDUG00000005878	zmat4a	60	74.051	ENSHGLG00100000081	ZMAT4	100	74.051	Heterocephalus_glaber_male
ENSSDUG00000005878	zmat4a	52	95.763	ENSHCOG00000006516	zmat4b	94	95.763	Hippocampus_comes
ENSSDUG00000005878	zmat4a	100	84.231	ENSIPUG00000022248	zmat4	100	84.231	Ictalurus_punctatus
ENSSDUG00000005878	zmat4a	87	75.652	ENSJJAG00000013484	Zmat4	100	75.652	Jaculus_jaculus
ENSSDUG00000005878	zmat4a	88	76.087	ENSLACG00000006206	-	99	76.087	Latimeria_chalumnae
ENSSDUG00000005878	zmat4a	53	55.797	ENSLACG00000005109	-	92	55.797	Latimeria_chalumnae
ENSSDUG00000005878	zmat4a	98	93.307	ENSLOCG00000015435	zmat4b	99	94.196	Lepisosteus_oculatus
ENSSDUG00000005878	zmat4a	85	76.444	ENSLAFG00000014753	ZMAT4	100	76.106	Loxodonta_africana
ENSSDUG00000005878	zmat4a	87	76.856	ENSMFAG00000043475	ZMAT4	97	80.537	Macaca_fascicularis
ENSSDUG00000005878	zmat4a	78	71.220	ENSMMUG00000000776	ZMAT4	100	74.872	Macaca_mulatta
ENSSDUG00000005878	zmat4a	87	76.856	ENSMNEG00000042102	ZMAT4	97	80.537	Macaca_nemestrina
ENSSDUG00000005878	zmat4a	87	76.856	ENSMLEG00000034448	ZMAT4	97	80.537	Mandrillus_leucophaeus
ENSSDUG00000005878	zmat4a	100	95.000	ENSMAMG00000019914	zmat4a	94	95.000	Mastacembelus_armatus
ENSSDUG00000005878	zmat4a	100	97.308	ENSMZEG00005004946	zmat4a	100	97.308	Maylandia_zebra
ENSSDUG00000005878	zmat4a	87	76.754	ENSMGAG00000002288	ZMAT4	99	76.991	Meleagris_gallopavo
ENSSDUG00000005878	zmat4a	74	73.333	ENSMICG00000047837	ZMAT4	100	73.333	Microcebus_murinus
ENSSDUG00000005878	zmat4a	87	76.087	ENSMOCG00000015996	Zmat4	100	76.087	Microtus_ochrogaster
ENSSDUG00000005878	zmat4a	100	97.308	ENSMMOG00000012619	zmat4a	97	97.308	Mola_mola
ENSSDUG00000005878	zmat4a	73	76.684	ENSMODG00000010499	ZMAT4	99	75.253	Monodelphis_domestica
ENSSDUG00000005878	zmat4a	100	96.538	ENSMALG00000015056	zmat4a	100	96.538	Monopterus_albus
ENSSDUG00000005878	zmat4a	87	76.419	MGP_CAROLIEiJ_G0030909	Zmat4	100	86.458	Mus_caroli
ENSSDUG00000005878	zmat4a	87	76.419	ENSMUSG00000037492	Zmat4	100	86.458	Mus_musculus
ENSSDUG00000005878	zmat4a	87	76.419	MGP_PahariEiJ_G0021380	Zmat4	100	86.458	Mus_pahari
ENSSDUG00000005878	zmat4a	87	76.419	MGP_SPRETEiJ_G0032028	Zmat4	100	86.458	Mus_spretus
ENSSDUG00000005878	zmat4a	87	75.000	ENSMPUG00000005832	ZMAT4	91	69.650	Mustela_putorius_furo
ENSSDUG00000005878	zmat4a	50	71.324	ENSMLUG00000014209	ZMAT4	100	71.324	Myotis_lucifugus
ENSSDUG00000005878	zmat4a	87	75.546	ENSNGAG00000015545	Zmat4	100	75.546	Nannospalax_galili
ENSSDUG00000005878	zmat4a	85	94.595	ENSNBRG00000011844	zmat4a	99	94.595	Neolamprologus_brichardi
ENSSDUG00000005878	zmat4a	87	76.856	ENSNLEG00000012564	ZMAT4	97	80.537	Nomascus_leucogenys
ENSSDUG00000005878	zmat4a	85	76.652	ENSMEUG00000000558	ZMAT4	100	76.652	Notamacropus_eugenii
ENSSDUG00000005878	zmat4a	87	76.419	ENSOPRG00000009257	ZMAT4	100	76.419	Ochotona_princeps
ENSSDUG00000005878	zmat4a	87	75.983	ENSODEG00000006439	ZMAT4	100	75.983	Octodon_degus
ENSSDUG00000005878	zmat4a	70	90.323	ENSONIG00000016086	zmat4a	100	90.323	Oreochromis_niloticus
ENSSDUG00000005878	zmat4a	82	36.585	ENSONIG00000020374	-	50	36.585	Oreochromis_niloticus
ENSSDUG00000005878	zmat4a	83	86.726	ENSOANG00000022431	ZMAT4	100	86.726	Ornithorhynchus_anatinus
ENSSDUG00000005878	zmat4a	87	76.419	ENSOCUG00000000977	ZMAT4	100	76.419	Oryctolagus_cuniculus
ENSSDUG00000005878	zmat4a	69	90.000	ENSORLG00000016169	zmat4b	90	91.603	Oryzias_latipes
ENSSDUG00000005878	zmat4a	100	95.057	ENSORLG00020019602	zmat4a	100	96.581	Oryzias_latipes_hni
ENSSDUG00000005878	zmat4a	100	95.057	ENSORLG00015009006	zmat4a	100	96.581	Oryzias_latipes_hsok
ENSSDUG00000005878	zmat4a	100	93.536	ENSOMEG00000003441	zmat4a	87	95.057	Oryzias_melastigma
ENSSDUG00000005878	zmat4a	85	75.785	ENSOGAG00000012558	ZMAT4	100	75.446	Otolemur_garnettii
ENSSDUG00000005878	zmat4a	85	76.682	ENSOARG00000002354	ZMAT4	84	76.682	Ovis_aries
ENSSDUG00000005878	zmat4a	85	77.130	ENSPPAG00000042573	ZMAT4	99	77.130	Pan_paniscus
ENSSDUG00000005878	zmat4a	87	75.000	ENSPPRG00000007023	ZMAT4	97	79.866	Panthera_pardus
ENSSDUG00000005878	zmat4a	87	75.000	ENSPTIG00000019738	ZMAT4	97	79.866	Panthera_tigris_altaica
ENSSDUG00000005878	zmat4a	87	76.856	ENSPTRG00000020191	ZMAT4	97	80.537	Pan_troglodytes
ENSSDUG00000005878	zmat4a	87	76.856	ENSPANG00000014196	ZMAT4	97	80.537	Papio_anubis
ENSSDUG00000005878	zmat4a	85	63.095	ENSPKIG00000021792	zmat4b	99	82.667	Paramormyrops_kingsleyae
ENSSDUG00000005878	zmat4a	100	88.462	ENSPKIG00000000048	zmat4a	100	88.462	Paramormyrops_kingsleyae
ENSSDUG00000005878	zmat4a	87	81.223	ENSPSIG00000004847	ZMAT4	100	81.223	Pelodiscus_sinensis
ENSSDUG00000005878	zmat4a	85	84.821	ENSPMGG00000001436	zmat4b	99	84.821	Periophthalmus_magnuspinnatus
ENSSDUG00000005878	zmat4a	85	54.867	ENSPMAG00000004582	zmat4a	97	54.867	Petromyzon_marinus
ENSSDUG00000005878	zmat4a	88	78.541	ENSPCIG00000028706	ZMAT4	93	78.541	Phascolarctos_cinereus
ENSSDUG00000005878	zmat4a	100	93.462	ENSPFOG00000006742	zmat4a	100	93.462	Poecilia_formosa
ENSSDUG00000005878	zmat4a	97	93.227	ENSPLAG00000019268	zmat4a	99	93.227	Poecilia_latipinna
ENSSDUG00000005878	zmat4a	100	93.462	ENSPMEG00000007870	zmat4a	100	96.537	Poecilia_mexicana
ENSSDUG00000005878	zmat4a	100	93.462	ENSPREG00000014914	zmat4a	100	93.462	Poecilia_reticulata
ENSSDUG00000005878	zmat4a	87	76.856	ENSPPYG00000018540	ZMAT4	100	76.856	Pongo_abelii
ENSSDUG00000005878	zmat4a	87	74.672	ENSPCAG00000004820	ZMAT4	100	74.672	Procavia_capensis
ENSSDUG00000005878	zmat4a	87	76.419	ENSPCOG00000007717	ZMAT4	97	80.537	Propithecus_coquereli
ENSSDUG00000005878	zmat4a	73	76.410	ENSPVAG00000011393	ZMAT4	84	76.410	Pteropus_vampyrus
ENSSDUG00000005878	zmat4a	100	96.154	ENSPNYG00000006173	zmat4a	92	96.154	Pundamilia_nyererei
ENSSDUG00000005878	zmat4a	100	90.000	ENSPNAG00000009604	zmat4a	100	90.000	Pygocentrus_nattereri
ENSSDUG00000005878	zmat4a	87	74.009	ENSPNAG00000023764	zmat4b	100	74.009	Pygocentrus_nattereri
ENSSDUG00000005878	zmat4a	87	75.652	ENSRNOG00000042690	Zmat4	98	85.217	Rattus_norvegicus
ENSSDUG00000005878	zmat4a	87	76.856	ENSRBIG00000031887	ZMAT4	97	80.537	Rhinopithecus_bieti
ENSSDUG00000005878	zmat4a	87	76.856	ENSRROG00000040877	ZMAT4	97	80.537	Rhinopithecus_roxellana
ENSSDUG00000005878	zmat4a	87	76.856	ENSSBOG00000017391	ZMAT4	97	80.537	Saimiri_boliviensis_boliviensis
ENSSDUG00000005878	zmat4a	70	67.961	ENSSHAG00000011847	ZMAT4	100	67.961	Sarcophilus_harrisii
ENSSDUG00000005878	zmat4a	100	91.923	ENSSFOG00015013158	zmat4	100	91.923	Scleropages_formosus
ENSSDUG00000005878	zmat4a	55	70.000	ENSSFOG00015015440	zmat4b	84	84.466	Scleropages_formosus
ENSSDUG00000005878	zmat4a	100	99.615	ENSSMAG00000017693	zmat4a	99	94.643	Scophthalmus_maximus
ENSSDUG00000005878	zmat4a	100	100.000	ENSSLDG00000012934	zmat4a	100	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000005878	zmat4a	87	69.869	ENSSARG00000003679	ZMAT4	100	69.869	Sorex_araneus
ENSSDUG00000005878	zmat4a	97	99.203	ENSSPAG00000021408	zmat4a	94	99.203	Stegastes_partitus
ENSSDUG00000005878	zmat4a	87	75.983	ENSSSCG00000007010	ZMAT4	100	75.983	Sus_scrofa
ENSSDUG00000005878	zmat4a	85	79.646	ENSTGUG00000005159	ZMAT4	99	79.646	Taeniopygia_guttata
ENSSDUG00000005878	zmat4a	100	95.769	ENSTRUG00000005170	zmat4a	86	95.769	Takifugu_rubripes
ENSSDUG00000005878	zmat4a	85	74.779	ENSTNIG00000018863	zmat4b	99	74.779	Tetraodon_nigroviridis
ENSSDUG00000005878	zmat4a	87	65.217	ENSTBEG00000016172	ZMAT4	100	65.217	Tupaia_belangeri
ENSSDUG00000005878	zmat4a	87	70.742	ENSTTRG00000009606	ZMAT4	100	70.742	Tursiops_truncatus
ENSSDUG00000005878	zmat4a	85	76.339	ENSUMAG00000025578	ZMAT4	99	76.339	Ursus_maritimus
ENSSDUG00000005878	zmat4a	87	66.957	ENSVPAG00000009783	ZMAT4	100	66.957	Vicugna_pacos
ENSSDUG00000005878	zmat4a	87	76.087	ENSVVUG00000020407	ZMAT4	100	76.087	Vulpes_vulpes
ENSSDUG00000005878	zmat4a	85	40.693	ENSXCOG00000010189	-	99	42.291	Xiphophorus_couchianus
ENSSDUG00000005878	zmat4a	52	72.358	ENSXCOG00000015061	zmat4b	87	72.358	Xiphophorus_couchianus
ENSSDUG00000005878	zmat4a	100	93.077	ENSXMAG00000010461	zmat4a	100	93.077	Xiphophorus_maculatus