EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000005881 (Gene tree)
Gene ID: 111236808
Gene Symbol: smpd5
Alias: Mitochondrial SMase|smpdm|zgc:153995
Full Name: sphingomyelin phosphodiesterase 5-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 4418 bases
Position: chrBDQW01000723.1:27763-32180
Accession: 111236808
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000008042	Exo_endo_phos	PF03372.23	4.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000008189	-	2299	XM_022765667	ENSSDUP00000008042	583 (aa)	XP_022621388	UPI000BBE17DA

Gene Model

Click here to download ENSSDUG00000005881's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu00600	Sphingolipid metabolism	KEGG
sdu01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000005881's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000005881	smpd5	100	80.717	ENSAPOG00000005846	smpd5	100	80.717	Acanthochromis_polyacanthus
ENSSDUG00000005881	smpd5	83	44.000	ENSAMEG00000006154	-	95	44.000	Ailuropoda_melanoleuca
ENSSDUG00000005881	smpd5	100	76.792	ENSACIG00000015732	smpd5	100	76.792	Amphilophus_citrinellus
ENSSDUG00000005881	smpd5	100	75.939	ENSAOCG00000001729	smpd5	100	75.939	Amphiprion_ocellaris
ENSSDUG00000005881	smpd5	100	81.399	ENSAPEG00000010110	smpd5	100	81.399	Amphiprion_percula
ENSSDUG00000005881	smpd5	100	78.669	ENSATEG00000005476	smpd5	100	78.669	Anabas_testudineus
ENSSDUG00000005881	smpd5	90	41.470	ENSACAG00000005338	-	99	41.470	Anolis_carolinensis
ENSSDUG00000005881	smpd5	100	74.106	ENSACLG00000004150	smpd5	100	74.446	Astatotilapia_calliptera
ENSSDUG00000005881	smpd5	99	41.586	ENSAMXG00000009000	smpd3	99	41.586	Astyanax_mexicanus
ENSSDUG00000005881	smpd5	99	60.818	ENSAMXG00000015890	smpd5	100	60.818	Astyanax_mexicanus
ENSSDUG00000005881	smpd5	77	40.667	ENSBTAG00000015040	-	98	40.541	Bos_taurus
ENSSDUG00000005881	smpd5	78	45.183	ENSCAFG00020018801	-	92	45.183	Canis_lupus_dingo
ENSSDUG00000005881	smpd5	78	52.492	ENSCPBG00000007123	-	92	52.492	Chrysemys_picta_bellii
ENSSDUG00000005881	smpd5	79	45.333	ENSCGRG00001020226	Smpd5	91	45.333	Cricetulus_griseus_chok1gshd
ENSSDUG00000005881	smpd5	79	45.333	ENSCGRG00000016807	Smpd5	91	45.333	Cricetulus_griseus_crigri
ENSSDUG00000005881	smpd5	90	74.763	ENSCSEG00000004339	smpd5	92	74.763	Cynoglossus_semilaevis
ENSSDUG00000005881	smpd5	99	60.137	ENSDARG00000059811	smpd5	99	60.137	Danio_rerio
ENSSDUG00000005881	smpd5	83	48.322	ENSEASG00005009745	-	97	48.322	Equus_asinus_asinus
ENSSDUG00000005881	smpd5	83	48.322	ENSECAG00000011998	-	97	48.322	Equus_caballus
ENSSDUG00000005881	smpd5	99	66.225	ENSELUG00000002998	smpd5	99	66.722	Esox_lucius
ENSSDUG00000005881	smpd5	99	40.944	ENSFCAG00000023364	SMPD3	99	40.944	Felis_catus
ENSSDUG00000005881	smpd5	81	64.509	ENSGMOG00000006983	smpd5	100	65.344	Gadus_morhua
ENSSDUG00000005881	smpd5	100	68.430	ENSGAFG00000005978	smpd5	100	68.430	Gambusia_affinis
ENSSDUG00000005881	smpd5	81	48.615	ENSGAGG00000010557	-	97	48.615	Gopherus_agassizii
ENSSDUG00000005881	smpd5	100	74.106	ENSHBUG00000017212	smpd5	100	74.446	Haplochromis_burtoni
ENSSDUG00000005881	smpd5	99	70.984	ENSHCOG00000005211	smpd5	100	70.984	Hippocampus_comes
ENSSDUG00000005881	smpd5	99	59.107	ENSIPUG00000007675	Smpd3	99	59.107	Ictalurus_punctatus
ENSSDUG00000005881	smpd5	79	45.875	ENSSTOG00000026841	-	93	45.875	Ictidomys_tridecemlineatus
ENSSDUG00000005881	smpd5	84	69.940	ENSKMAG00000014523	smpd5	99	69.940	Kryptolebias_marmoratus
ENSSDUG00000005881	smpd5	100	80.205	ENSLBEG00000000634	smpd5	99	80.205	Labrus_bergylta
ENSSDUG00000005881	smpd5	100	80.920	ENSMAMG00000012885	smpd5	100	80.920	Mastacembelus_armatus
ENSSDUG00000005881	smpd5	100	74.276	ENSMZEG00005014373	smpd5	100	74.617	Maylandia_zebra
ENSSDUG00000005881	smpd5	80	45.724	ENSMICG00000044882	-	95	45.724	Microcebus_murinus
ENSSDUG00000005881	smpd5	79	44.850	ENSMOCG00000004813	Smpd5	91	44.850	Microtus_ochrogaster
ENSSDUG00000005881	smpd5	81	44.702	ENSMODG00000024098	-	95	44.702	Monodelphis_domestica
ENSSDUG00000005881	smpd5	81	50.980	ENSMODG00000005091	SMPD3	75	50.980	Monodelphis_domestica
ENSSDUG00000005881	smpd5	78	46.309	ENSMPUG00000007287	-	97	46.309	Mustela_putorius_furo
ENSSDUG00000005881	smpd5	100	73.765	ENSNBRG00000015871	smpd5	100	74.106	Neolamprologus_brichardi
ENSSDUG00000005881	smpd5	52	50.654	ENSMEUG00000015228	-	73	50.980	Notamacropus_eugenii
ENSSDUG00000005881	smpd5	100	73.424	ENSONIG00000003005	smpd5	100	73.765	Oreochromis_niloticus
ENSSDUG00000005881	smpd5	84	41.791	ENSOANG00000015137	-	96	42.985	Ornithorhynchus_anatinus
ENSSDUG00000005881	smpd5	100	70.819	ENSORLG00000007890	smpd5	100	70.819	Oryzias_latipes
ENSSDUG00000005881	smpd5	100	71.160	ENSORLG00020014621	smpd5	100	71.160	Oryzias_latipes_hni
ENSSDUG00000005881	smpd5	100	70.819	ENSORLG00015020862	smpd5	100	70.819	Oryzias_latipes_hsok
ENSSDUG00000005881	smpd5	100	70.478	ENSOMEG00000021400	smpd5	100	70.478	Oryzias_melastigma
ENSSDUG00000005881	smpd5	76	43.711	ENSOARG00000015429	-	89	42.398	Ovis_aries
ENSSDUG00000005881	smpd5	82	44.554	ENSPPRG00000024542	-	97	44.554	Panthera_pardus
ENSSDUG00000005881	smpd5	99	41.463	ENSPPRG00000012973	SMPD3	99	41.463	Panthera_pardus
ENSSDUG00000005881	smpd5	99	42.571	ENSPTIG00000006728	SMPD3	99	42.571	Panthera_tigris_altaica
ENSSDUG00000005881	smpd5	99	39.752	ENSPKIG00000015630	smpd3	99	39.752	Paramormyrops_kingsleyae
ENSSDUG00000005881	smpd5	99	57.487	ENSPKIG00000019783	smpd5	99	57.487	Paramormyrops_kingsleyae
ENSSDUG00000005881	smpd5	99	63.385	ENSPMGG00000011984	smpd5	100	62.917	Periophthalmus_magnuspinnatus
ENSSDUG00000005881	smpd5	78	44.667	ENSPEMG00000015740	Smpd5	89	44.667	Peromyscus_maniculatus_bairdii
ENSSDUG00000005881	smpd5	82	46.205	ENSPCIG00000009107	-	92	46.205	Phascolarctos_cinereus
ENSSDUG00000005881	smpd5	100	67.912	ENSPFOG00000002379	smpd5	100	67.912	Poecilia_formosa
ENSSDUG00000005881	smpd5	100	67.918	ENSPLAG00000015772	smpd5	100	68.259	Poecilia_latipinna
ENSSDUG00000005881	smpd5	100	68.089	ENSPMEG00000001599	smpd5	100	68.089	Poecilia_mexicana
ENSSDUG00000005881	smpd5	100	68.089	ENSPREG00000000831	smpd5	100	68.089	Poecilia_reticulata
ENSSDUG00000005881	smpd5	100	70.307	ENSPNYG00000015647	smpd5	100	70.307	Pundamilia_nyererei
ENSSDUG00000005881	smpd5	99	62.478	ENSPNAG00000018539	smpd5	100	62.478	Pygocentrus_nattereri
ENSSDUG00000005881	smpd5	94	48.000	ENSPNAG00000001774	smpd3	84	48.000	Pygocentrus_nattereri
ENSSDUG00000005881	smpd5	81	50.980	ENSSHAG00000006412	SMPD3	75	50.980	Sarcophilus_harrisii
ENSSDUG00000005881	smpd5	82	44.172	ENSSHAG00000004065	-	96	44.172	Sarcophilus_harrisii
ENSSDUG00000005881	smpd5	99	57.789	ENSSFOG00015000870	smpd5	99	57.789	Scleropages_formosus
ENSSDUG00000005881	smpd5	100	82.935	ENSSMAG00000020132	smpd5	100	82.935	Scophthalmus_maximus
ENSSDUG00000005881	smpd5	100	98.628	ENSSLDG00000015320	smpd5	100	98.628	Seriola_lalandi_dorsalis
ENSSDUG00000005881	smpd5	100	72.014	ENSSPAG00000007973	smpd5	100	72.014	Stegastes_partitus
ENSSDUG00000005881	smpd5	51	45.485	ENSSSCG00000005922	-	97	46.823	Sus_scrofa
ENSSDUG00000005881	smpd5	99	70.619	ENSTRUG00000014862	smpd5	99	70.619	Takifugu_rubripes
ENSSDUG00000005881	smpd5	99	70.962	ENSTNIG00000018420	smpd5	99	70.962	Tetraodon_nigroviridis
ENSSDUG00000005881	smpd5	79	53.226	ENSXETG00000031246	-	91	53.226	Xenopus_tropicalis
ENSSDUG00000005881	smpd5	81	50.645	ENSXETG00000006675	smpd3	99	37.054	Xenopus_tropicalis
ENSSDUG00000005881	smpd5	100	67.747	ENSXCOG00000019783	smpd5	100	67.747	Xiphophorus_couchianus
ENSSDUG00000005881	smpd5	100	68.771	ENSXMAG00000013998	smpd5	100	68.771	Xiphophorus_maculatus