EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000005919 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 3933 bases
Position: chrBDQW01000850.1:40713-44645
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000008086	MMR_HSR1	PF01926.23	1.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000008232	-	870	-	ENSSDUP00000008086	289 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000005919's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000005919's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000005919	-	87	82.540	ENSSDUG00000000370	-	96	82.540
ENSSDUG00000005919	-	65	43.684	ENSSDUG00000021349	-	81	43.684
ENSSDUG00000005919	-	85	83.401	ENSSDUG00000000316	-	99	83.401

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000005919	-	76	38.009	ENSAPOG00000006213	-	75	38.009	Acanthochromis_polyacanthus
ENSSDUG00000005919	-	66	41.361	ENSACIG00000014950	-	80	41.361	Amphilophus_citrinellus
ENSSDUG00000005919	-	76	40.359	ENSACIG00000023712	-	55	40.359	Amphilophus_citrinellus
ENSSDUG00000005919	-	80	49.367	ENSATEG00000008595	-	83	49.367	Anabas_testudineus
ENSSDUG00000005919	-	72	62.019	ENSACLG00000023033	-	52	62.019	Astatotilapia_calliptera
ENSSDUG00000005919	-	75	42.009	ENSACLG00000015361	-	54	42.009	Astatotilapia_calliptera
ENSSDUG00000005919	-	95	38.783	ENSACLG00000006538	-	55	40.637	Astatotilapia_calliptera
ENSSDUG00000005919	-	83	44.534	ENSAMXG00000030535	-	62	45.946	Astyanax_mexicanus
ENSSDUG00000005919	-	91	38.148	ENSCVAG00000022669	-	94	38.148	Cyprinodon_variegatus
ENSSDUG00000005919	-	75	40.639	ENSCVAG00000022676	-	64	40.639	Cyprinodon_variegatus
ENSSDUG00000005919	-	72	44.019	ENSCVAG00000014791	-	56	44.019	Cyprinodon_variegatus
ENSSDUG00000005919	-	78	44.156	ENSDARG00000076398	si:dkey-201l21.4	56	44.156	Danio_rerio
ENSSDUG00000005919	-	76	46.188	ENSDARG00000100858	zgc:171695	52	46.188	Danio_rerio
ENSSDUG00000005919	-	75	45.536	ENSDARG00000039888	CR855393.1	61	45.536	Danio_rerio
ENSSDUG00000005919	-	70	39.806	ENSELUG00000008413	-	51	39.437	Esox_lucius
ENSSDUG00000005919	-	78	43.172	ENSELUG00000022148	-	51	43.172	Esox_lucius
ENSSDUG00000005919	-	81	37.083	ENSFHEG00000002160	-	74	37.083	Fundulus_heteroclitus
ENSSDUG00000005919	-	64	55.319	ENSGMOG00000019786	-	92	55.319	Gadus_morhua
ENSSDUG00000005919	-	64	56.757	ENSGMOG00000008232	-	54	57.065	Gadus_morhua
ENSSDUG00000005919	-	65	58.201	ENSGMOG00000020059	-	91	58.201	Gadus_morhua
ENSSDUG00000005919	-	54	55.346	ENSGMOG00000019744	-	89	55.346	Gadus_morhua
ENSSDUG00000005919	-	56	55.152	ENSGMOG00000020208	-	91	55.152	Gadus_morhua
ENSSDUG00000005919	-	80	34.454	ENSGAFG00000005050	-	91	34.454	Gambusia_affinis
ENSSDUG00000005919	-	79	56.140	ENSGAFG00000018470	-	88	56.140	Gambusia_affinis
ENSSDUG00000005919	-	64	55.080	ENSGACG00000015787	-	86	55.080	Gasterosteus_aculeatus
ENSSDUG00000005919	-	85	38.306	ENSGACG00000015437	-	62	38.306	Gasterosteus_aculeatus
ENSSDUG00000005919	-	84	41.224	ENSGACG00000005035	-	60	41.224	Gasterosteus_aculeatus
ENSSDUG00000005919	-	65	42.632	ENSHBUG00000023729	-	50	42.632	Haplochromis_burtoni
ENSSDUG00000005919	-	75	40.639	ENSHBUG00000007413	-	87	40.639	Haplochromis_burtoni
ENSSDUG00000005919	-	70	42.857	ENSIPUG00000000082	-	85	42.857	Ictalurus_punctatus
ENSSDUG00000005919	-	79	42.553	ENSIPUG00000013512	-	55	42.553	Ictalurus_punctatus
ENSSDUG00000005919	-	84	42.412	ENSIPUG00000009201	-	98	42.412	Ictalurus_punctatus
ENSSDUG00000005919	-	75	35.000	ENSLBEG00000019795	-	90	35.000	Labrus_bergylta
ENSSDUG00000005919	-	83	53.878	ENSLBEG00000012781	-	88	53.878	Labrus_bergylta
ENSSDUG00000005919	-	83	55.738	ENSLBEG00000028432	-	89	55.738	Labrus_bergylta
ENSSDUG00000005919	-	81	55.745	ENSLOCG00000017620	-	68	55.745	Lepisosteus_oculatus
ENSSDUG00000005919	-	77	56.757	ENSMAMG00000015204	-	86	56.757	Mastacembelus_armatus
ENSSDUG00000005919	-	75	44.700	ENSMZEG00005004397	-	74	45.161	Maylandia_zebra
ENSSDUG00000005919	-	77	39.035	ENSMZEG00005028531	-	51	39.035	Maylandia_zebra
ENSSDUG00000005919	-	65	43.158	ENSMZEG00005023309	-	50	43.158	Maylandia_zebra
ENSSDUG00000005919	-	75	43.379	ENSMMOG00000011295	-	78	43.379	Mola_mola
ENSSDUG00000005919	-	76	41.921	ENSMMOG00000015162	-	87	41.921	Mola_mola
ENSSDUG00000005919	-	81	40.506	ENSNBRG00000006565	-	75	40.506	Neolamprologus_brichardi
ENSSDUG00000005919	-	90	52.672	ENSONIG00000021041	-	50	52.030	Oreochromis_niloticus
ENSSDUG00000005919	-	81	39.506	ENSONIG00000013895	-	85	40.265	Oreochromis_niloticus
ENSSDUG00000005919	-	89	33.209	ENSONIG00000013617	-	64	33.209	Oreochromis_niloticus
ENSSDUG00000005919	-	82	53.061	ENSONIG00000020720	-	50	53.061	Oreochromis_niloticus
ENSSDUG00000005919	-	77	40.625	ENSONIG00000017927	-	66	40.625	Oreochromis_niloticus
ENSSDUG00000005919	-	75	38.496	ENSPMGG00000002690	-	61	38.496	Periophthalmus_magnuspinnatus
ENSSDUG00000005919	-	79	33.755	ENSPMGG00000008676	-	65	33.755	Periophthalmus_magnuspinnatus
ENSSDUG00000005919	-	75	38.496	ENSPMGG00000016798	-	55	38.496	Periophthalmus_magnuspinnatus
ENSSDUG00000005919	-	81	44.915	ENSPMGG00000016292	-	57	44.915	Periophthalmus_magnuspinnatus
ENSSDUG00000005919	-	75	37.611	ENSPMGG00000020583	-	53	37.611	Periophthalmus_magnuspinnatus
ENSSDUG00000005919	-	91	37.453	ENSPFOG00000020973	-	50	37.453	Poecilia_formosa
ENSSDUG00000005919	-	84	38.618	ENSPLAG00000019926	-	87	38.618	Poecilia_latipinna
ENSSDUG00000005919	-	80	33.906	ENSPMEG00000002979	-	50	33.906	Poecilia_mexicana
ENSSDUG00000005919	-	75	39.726	ENSPREG00000007255	-	53	39.726	Poecilia_reticulata
ENSSDUG00000005919	-	76	59.276	ENSPNYG00000016575	-	74	59.276	Pundamilia_nyererei
ENSSDUG00000005919	-	84	39.924	ENSPNYG00000023683	-	50	39.924	Pundamilia_nyererei
ENSSDUG00000005919	-	69	32.161	ENSPNAG00000011130	-	66	32.161	Pygocentrus_nattereri
ENSSDUG00000005919	-	76	41.441	ENSSLDG00000018054	-	90	41.441	Seriola_lalandi_dorsalis
ENSSDUG00000005919	-	78	50.885	ENSSLDG00000017661	-	97	50.885	Seriola_lalandi_dorsalis
ENSSDUG00000005919	-	76	58.824	ENSSPAG00000003300	-	86	58.824	Stegastes_partitus
ENSSDUG00000005919	-	72	41.905	ENSSPAG00000015996	-	78	41.905	Stegastes_partitus
ENSSDUG00000005919	-	76	42.273	ENSTRUG00000001460	-	67	42.273	Takifugu_rubripes
ENSSDUG00000005919	-	75	39.726	ENSTRUG00000017314	-	92	39.726	Takifugu_rubripes
ENSSDUG00000005919	-	75	40.639	ENSTRUG00000021059	-	80	40.639	Takifugu_rubripes
ENSSDUG00000005919	-	75	40.724	ENSTNIG00000005878	-	57	40.724	Tetraodon_nigroviridis
ENSSDUG00000005919	-	80	39.485	ENSTNIG00000003332	-	58	39.485	Tetraodon_nigroviridis
ENSSDUG00000005919	-	75	41.629	ENSTNIG00000006523	-	55	41.629	Tetraodon_nigroviridis
ENSSDUG00000005919	-	78	51.293	ENSXETG00000026193	-	50	51.293	Xenopus_tropicalis
ENSSDUG00000005919	-	82	38.494	ENSXCOG00000001022	-	62	37.692	Xiphophorus_couchianus