EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000005949 (Gene tree)
Gene ID: 111224952
Gene Symbol: mrpl42
Alias: -
Full Name: mitochondrial ribosomal protein L42
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 3539 bases
Position: chrBDQW01000138.1:9403614-9407152
Accession: 111224952
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000008110	MRP-S32	PF10210.9	5e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000008257	-	1122	XM_022749661	ENSSDUP00000008110	145 (aa)	XP_022605382	UPI000BBED6C1

Gene Model

Click here to download ENSSDUG00000005949's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000005949's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000005949	mrpl42	100	80.822	ENSAPOG00000010677	mrpl42	100	80.822	Acanthochromis_polyacanthus
ENSSDUG00000005949	mrpl42	100	82.759	ENSAOCG00000011620	mrpl42	100	82.759	Amphiprion_ocellaris
ENSSDUG00000005949	mrpl42	100	82.759	ENSAPEG00000019516	mrpl42	100	82.759	Amphiprion_percula
ENSSDUG00000005949	mrpl42	90	87.786	ENSATEG00000014106	mrpl42	100	87.786	Anabas_testudineus
ENSSDUG00000005949	mrpl42	68	70.707	ENSACAG00000012606	MRPL42	68	70.707	Anolis_carolinensis
ENSSDUG00000005949	mrpl42	100	78.621	ENSACLG00000026856	mrpl42	100	78.621	Astatotilapia_calliptera
ENSSDUG00000005949	mrpl42	83	50.413	ENSAMXG00000035149	mrpl42	80	50.413	Astyanax_mexicanus
ENSSDUG00000005949	mrpl42	99	71.329	ENSCSEG00000010067	mrpl42	98	71.329	Cynoglossus_semilaevis
ENSSDUG00000005949	mrpl42	100	75.862	ENSCVAG00000002612	mrpl42	100	75.862	Cyprinodon_variegatus
ENSSDUG00000005949	mrpl42	100	55.862	ENSDARG00000079391	mrpl42	100	55.862	Danio_rerio
ENSSDUG00000005949	mrpl42	68	48.571	ENSEBUG00000005581	mrpl42	78	48.571	Eptatretus_burgeri
ENSSDUG00000005949	mrpl42	100	70.548	ENSELUG00000001973	mrpl42	100	70.548	Esox_lucius
ENSSDUG00000005949	mrpl42	100	71.724	ENSFHEG00000018696	mrpl42	100	71.724	Fundulus_heteroclitus
ENSSDUG00000005949	mrpl42	66	78.125	ENSGMOG00000002972	mrpl42	99	78.125	Gadus_morhua
ENSSDUG00000005949	mrpl42	100	75.862	ENSGAFG00000018373	mrpl42	100	75.862	Gambusia_affinis
ENSSDUG00000005949	mrpl42	67	84.536	ENSGACG00000018811	mrpl42	100	84.536	Gasterosteus_aculeatus
ENSSDUG00000005949	mrpl42	100	78.621	ENSHBUG00000015960	mrpl42	100	78.621	Haplochromis_burtoni
ENSSDUG00000005949	mrpl42	100	71.233	ENSHCOG00000014046	mrpl42	100	71.233	Hippocampus_comes
ENSSDUG00000005949	mrpl42	68	57.576	ENSIPUG00000015395	mrpl42	67	57.576	Ictalurus_punctatus
ENSSDUG00000005949	mrpl42	100	73.793	ENSKMAG00000013671	mrpl42	100	73.793	Kryptolebias_marmoratus
ENSSDUG00000005949	mrpl42	100	78.621	ENSLBEG00000028618	mrpl42	99	78.621	Labrus_bergylta
ENSSDUG00000005949	mrpl42	100	82.069	ENSMAMG00000009737	mrpl42	100	82.069	Mastacembelus_armatus
ENSSDUG00000005949	mrpl42	100	78.621	ENSMZEG00005008545	mrpl42	96	78.621	Maylandia_zebra
ENSSDUG00000005949	mrpl42	74	79.439	ENSMMOG00000002317	mrpl42	70	79.439	Mola_mola
ENSSDUG00000005949	mrpl42	100	74.194	ENSMALG00000015794	mrpl42	96	74.194	Monopterus_albus
ENSSDUG00000005949	mrpl42	100	77.241	ENSNBRG00000003307	mrpl42	100	77.241	Neolamprologus_brichardi
ENSSDUG00000005949	mrpl42	100	78.621	ENSONIG00000011753	mrpl42	100	78.621	Oreochromis_niloticus
ENSSDUG00000005949	mrpl42	100	48.980	ENSOANG00000019984	-	100	48.980	Ornithorhynchus_anatinus
ENSSDUG00000005949	mrpl42	100	69.863	ENSORLG00000013500	mrpl42	85	69.863	Oryzias_latipes
ENSSDUG00000005949	mrpl42	100	71.918	ENSORLG00020000548	mrpl42	100	71.918	Oryzias_latipes_hni
ENSSDUG00000005949	mrpl42	100	70.345	ENSORLG00015016984	mrpl42	100	70.345	Oryzias_latipes_hsok
ENSSDUG00000005949	mrpl42	100	73.793	ENSOMEG00000010700	mrpl42	100	73.793	Oryzias_melastigma
ENSSDUG00000005949	mrpl42	100	60.959	ENSPKIG00000025457	mrpl42	100	60.959	Paramormyrops_kingsleyae
ENSSDUG00000005949	mrpl42	70	78.218	ENSPMGG00000019705	mrpl42	71	78.218	Periophthalmus_magnuspinnatus
ENSSDUG00000005949	mrpl42	68	56.863	ENSPMAG00000008091	mrpl42	66	56.863	Petromyzon_marinus
ENSSDUG00000005949	mrpl42	100	76.552	ENSPFOG00000016539	mrpl42	99	76.552	Poecilia_formosa
ENSSDUG00000005949	mrpl42	100	75.862	ENSPLAG00000001255	mrpl42	100	75.862	Poecilia_latipinna
ENSSDUG00000005949	mrpl42	100	76.552	ENSPMEG00000016462	mrpl42	100	76.552	Poecilia_mexicana
ENSSDUG00000005949	mrpl42	82	72.269	ENSPREG00000012053	mrpl42	87	72.269	Poecilia_reticulata
ENSSDUG00000005949	mrpl42	100	78.621	ENSPNYG00000009586	mrpl42	100	78.621	Pundamilia_nyererei
ENSSDUG00000005949	mrpl42	94	51.095	ENSPNAG00000020753	mrpl42	94	51.095	Pygocentrus_nattereri
ENSSDUG00000005949	mrpl42	100	86.207	ENSSMAG00000000262	mrpl42	100	86.207	Scophthalmus_maximus
ENSSDUG00000005949	mrpl42	100	96.552	ENSSLDG00000010159	mrpl42	100	96.552	Seriola_lalandi_dorsalis
ENSSDUG00000005949	mrpl42	100	74.483	ENSTRUG00000025949	mrpl42	99	74.483	Takifugu_rubripes
ENSSDUG00000005949	mrpl42	68	62.626	ENSXETG00000032902	mrpl42	80	62.626	Xenopus_tropicalis
ENSSDUG00000005949	mrpl42	100	66.667	ENSXCOG00000013875	mrpl42	98	66.667	Xiphophorus_couchianus