EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000005960 (Gene tree)
Gene ID: 111229089
Gene Symbol: rab18b
Alias: zgc:92523
Full Name: ras-related protein Rab-18-B
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 5932 bases
Position: chrBDQW01000226.1:779238-785169
Accession: 111229089
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000008138	MMR_HSR1	PF01926.23	4.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000008286	-	3258	XM_022755261	ENSSDUP00000008138	205 (aa)	XP_022610982	UPI000BBF373F

Gene Model

Click here to download ENSSDUG00000005960's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000005960's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000005960	rab18b	77	31.481	ENSSDUG00000009122	rheb	85	31.481
ENSSDUG00000005960	rab18b	86	31.915	ENSSDUG00000004119	rab36	62	31.915
ENSSDUG00000005960	rab18b	83	45.614	ENSSDUG00000002965	rab11ba	79	44.706
ENSSDUG00000005960	rab18b	83	41.279	ENSSDUG00000014091	-	81	41.279
ENSSDUG00000005960	rab18b	80	45.122	ENSSDUG00000004633	RAB15	77	45.122
ENSSDUG00000005960	rab18b	95	42.995	ENSSDUG00000023008	rab5c	91	42.995
ENSSDUG00000005960	rab18b	86	48.588	ENSSDUG00000004445	zgc:171927	81	48.588
ENSSDUG00000005960	rab18b	80	46.951	ENSSDUG00000005719	si:dkey-16l2.16	86	43.407
ENSSDUG00000005960	rab18b	83	45.614	ENSSDUG00000002934	-	78	45.614
ENSSDUG00000005960	rab18b	73	41.060	ENSSDUG00000006618	RAB17	66	41.060
ENSSDUG00000005960	rab18b	83	45.029	ENSSDUG00000002580	rab11a	79	45.029
ENSSDUG00000005960	rab18b	81	47.619	ENSSDUG00000005627	rab15	77	47.619
ENSSDUG00000005960	rab18b	79	31.325	ENSSDUG00000003036	dnajc27	61	31.325
ENSSDUG00000005960	rab18b	71	35.333	ENSSDUG00000006543	RAB29	75	35.333
ENSSDUG00000005960	rab18b	93	40.102	ENSSDUG00000013968	rab33a	82	40.102
ENSSDUG00000005960	rab18b	82	37.059	ENSSDUG00000010675	si:ch73-116o1.2	78	37.059
ENSSDUG00000005960	rab18b	93	85.340	ENSSDUG00000003823	rab18a	99	84.314
ENSSDUG00000005960	rab18b	83	39.766	ENSSDUG00000018970	RAB6B	79	39.766
ENSSDUG00000005960	rab18b	94	41.237	ENSSDUG00000017131	rab22a	98	41.237
ENSSDUG00000005960	rab18b	95	46.154	ENSSDUG00000016888	rab1ab	96	41.071
ENSSDUG00000005960	rab18b	83	45.614	ENSSDUG00000013558	rab11bb	78	45.614
ENSSDUG00000005960	rab18b	80	38.922	ENSSDUG00000019738	si:dkey-13a21.4	83	38.690
ENSSDUG00000005960	rab18b	51	31.429	ENSSDUG00000017824	-	80	32.759
ENSSDUG00000005960	rab18b	93	35.714	ENSSDUG00000008151	zgc:101559	84	35.714
ENSSDUG00000005960	rab18b	97	38.500	ENSSDUG00000021882	rab6ba	95	38.500
ENSSDUG00000005960	rab18b	95	45.641	ENSSDUG00000004698	rab1ba	96	45.641
ENSSDUG00000005960	rab18b	93	41.176	ENSSDUG00000004551	rab14	94	41.176
ENSSDUG00000005960	rab18b	80	46.951	ENSSDUG00000006307	-	82	46.951
ENSSDUG00000005960	rab18b	79	48.780	ENSSDUG00000008505	rab12	67	48.780
ENSSDUG00000005960	rab18b	79	32.317	ENSSDUG00000014082	si:cabz01085950.1	81	32.317
ENSSDUG00000005960	rab18b	80	46.061	ENSSDUG00000013050	-	76	46.061
ENSSDUG00000005960	rab18b	76	46.497	ENSSDUG00000006260	rab25b	80	46.497
ENSSDUG00000005960	rab18b	85	30.939	ENSSDUG00000016858	-	93	30.939
ENSSDUG00000005960	rab18b	80	41.818	ENSSDUG00000011851	rab42a	76	41.818
ENSSDUG00000005960	rab18b	51	31.429	ENSSDUG00000014258	RAP2B	83	32.759
ENSSDUG00000005960	rab18b	83	39.766	ENSSDUG00000009251	rab6bb	80	39.766
ENSSDUG00000005960	rab18b	72	44.444	ENSSDUG00000019885	-	63	44.444
ENSSDUG00000005960	rab18b	97	38.806	ENSSDUG00000009835	rab5aa	91	38.806
ENSSDUG00000005960	rab18b	79	37.952	ENSSDUG00000003386	rab9a	82	37.952
ENSSDUG00000005960	rab18b	93	33.333	ENSSDUG00000008011	-	96	33.333
ENSSDUG00000005960	rab18b	98	45.274	ENSSDUG00000022535	RAB1A	96	46.154
ENSSDUG00000005960	rab18b	80	30.058	ENSSDUG00000017586	-	85	30.058
ENSSDUG00000005960	rab18b	83	35.465	ENSSDUG00000023508	rab23	75	35.065
ENSSDUG00000005960	rab18b	73	36.000	ENSSDUG00000023163	rras2	83	36.095
ENSSDUG00000005960	rab18b	88	32.787	ENSSDUG00000010942	rab34a	68	32.787
ENSSDUG00000005960	rab18b	79	38.554	ENSSDUG00000005037	-	78	38.554
ENSSDUG00000005960	rab18b	81	35.503	ENSSDUG00000014765	rabl2	74	35.503
ENSSDUG00000005960	rab18b	90	30.729	ENSSDUG00000016760	rab34b	60	30.729
ENSSDUG00000005960	rab18b	72	42.000	ENSSDUG00000001791	rab33ba	62	42.000
ENSSDUG00000005960	rab18b	83	40.936	ENSSDUG00000013496	-	80	40.936
ENSSDUG00000005960	rab18b	81	33.735	ENSSDUG00000019086	hrasb	87	33.735
ENSSDUG00000005960	rab18b	79	46.296	ENSSDUG00000006278	rab11al	75	46.296
ENSSDUG00000005960	rab18b	89	47.340	ENSSDUG00000013724	rab2a	97	44.498
ENSSDUG00000005960	rab18b	80	50.000	ENSSDUG00000004950	rab35b	96	45.128
ENSSDUG00000005960	rab18b	80	34.146	ENSSDUG00000017779	kras	95	32.961
ENSSDUG00000005960	rab18b	80	50.610	ENSSDUG00000013325	rab30	80	50.610
ENSSDUG00000005960	rab18b	80	45.181	ENSSDUG00000009735	rab25a	79	45.181
ENSSDUG00000005960	rab18b	79	37.952	ENSSDUG00000007575	rab9b	82	37.952

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000005960	rab18b	99	84.878	ENSG00000099246	RAB18	99	84.878	Homo_sapiens
ENSSDUG00000005960	rab18b	100	96.098	ENSAPOG00000019881	rab18b	100	96.098	Acanthochromis_polyacanthus
ENSSDUG00000005960	rab18b	99	74.043	ENSAMEG00000015990	RAB18	99	74.043	Ailuropoda_melanoleuca
ENSSDUG00000005960	rab18b	100	97.073	ENSACIG00000008102	rab18b	100	97.073	Amphilophus_citrinellus
ENSSDUG00000005960	rab18b	100	96.585	ENSAOCG00000013479	rab18b	100	96.585	Amphiprion_ocellaris
ENSSDUG00000005960	rab18b	100	97.073	ENSAPEG00000022923	rab18b	100	97.073	Amphiprion_percula
ENSSDUG00000005960	rab18b	99	94.118	ENSATEG00000002952	rab18b	99	94.118	Anabas_testudineus
ENSSDUG00000005960	rab18b	99	84.878	ENSANAG00000035856	RAB18	99	84.878	Aotus_nancymaae
ENSSDUG00000005960	rab18b	100	96.585	ENSACLG00000015289	rab18b	100	96.585	Astatotilapia_calliptera
ENSSDUG00000005960	rab18b	99	87.745	ENSAMXG00000042073	rab18b	99	87.745	Astyanax_mexicanus
ENSSDUG00000005960	rab18b	99	82.927	ENSBTAG00000050873	-	99	82.927	Bos_taurus
ENSSDUG00000005960	rab18b	99	84.878	ENSBTAG00000009871	RAB18	88	84.878	Bos_taurus
ENSSDUG00000005960	rab18b	99	84.878	ENSCJAG00000045749	RAB18	99	84.878	Callithrix_jacchus
ENSSDUG00000005960	rab18b	99	84.878	ENSCAFG00020003253	RAB18	99	84.878	Canis_lupus_dingo
ENSSDUG00000005960	rab18b	99	84.878	ENSCHIG00000008749	RAB18	99	84.878	Capra_hircus
ENSSDUG00000005960	rab18b	99	84.878	ENSTSYG00000013092	RAB18	99	84.878	Carlito_syrichta
ENSSDUG00000005960	rab18b	99	84.878	ENSCPOG00000032827	RAB18	99	84.878	Cavia_porcellus
ENSSDUG00000005960	rab18b	99	84.878	ENSCCAG00000006762	RAB18	99	84.878	Cebus_capucinus
ENSSDUG00000005960	rab18b	99	84.878	ENSCATG00000009672	RAB18	99	84.878	Cercocebus_atys
ENSSDUG00000005960	rab18b	99	84.878	ENSCSAG00000011749	RAB18	99	84.878	Chlorocebus_sabaeus
ENSSDUG00000005960	rab18b	99	84.878	ENSCANG00000035397	RAB18	99	84.878	Colobus_angolensis_palliatus
ENSSDUG00000005960	rab18b	99	84.878	ENSCGRG00001017519	Rab18	99	84.878	Cricetulus_griseus_chok1gshd
ENSSDUG00000005960	rab18b	99	84.878	ENSCGRG00000017201	Rab18	99	84.878	Cricetulus_griseus_crigri
ENSSDUG00000005960	rab18b	99	91.176	ENSCSEG00000016803	rab18b	99	94.359	Cynoglossus_semilaevis
ENSSDUG00000005960	rab18b	99	88.235	ENSDARG00000098344	rab18b	99	88.235	Danio_rerio
ENSSDUG00000005960	rab18b	99	84.878	ENSDNOG00000047713	RAB18	99	84.878	Dasypus_novemcinctus
ENSSDUG00000005960	rab18b	55	88.496	ENSDNOG00000038845	-	75	88.496	Dasypus_novemcinctus
ENSSDUG00000005960	rab18b	85	82.759	ENSDORG00000029360	-	83	82.759	Dipodomys_ordii
ENSSDUG00000005960	rab18b	99	84.390	ENSDORG00000028596	-	99	84.390	Dipodomys_ordii
ENSSDUG00000005960	rab18b	99	84.878	ENSEASG00005007164	RAB18	99	84.878	Equus_asinus_asinus
ENSSDUG00000005960	rab18b	99	84.878	ENSECAG00000017521	RAB18	88	84.878	Equus_caballus
ENSSDUG00000005960	rab18b	100	85.437	ENSELUG00000016450	rab18b	100	85.437	Esox_lucius
ENSSDUG00000005960	rab18b	99	84.878	ENSFCAG00000027161	RAB18	99	84.878	Felis_catus
ENSSDUG00000005960	rab18b	94	86.458	ENSFALG00000007160	RAB18	99	84.466	Ficedula_albicollis
ENSSDUG00000005960	rab18b	100	92.683	ENSFHEG00000020035	rab18b	100	92.683	Fundulus_heteroclitus
ENSSDUG00000005960	rab18b	100	85.366	ENSGMOG00000016608	rab18b	100	85.366	Gadus_morhua
ENSSDUG00000005960	rab18b	99	85.366	ENSGALG00000007435	RAB18	99	85.366	Gallus_gallus
ENSSDUG00000005960	rab18b	100	92.683	ENSGAFG00000008560	rab18b	100	92.683	Gambusia_affinis
ENSSDUG00000005960	rab18b	100	91.707	ENSGACG00000016395	rab18b	100	91.707	Gasterosteus_aculeatus
ENSSDUG00000005960	rab18b	99	84.878	ENSGGOG00000008086	RAB18	99	84.878	Gorilla_gorilla
ENSSDUG00000005960	rab18b	100	96.585	ENSHBUG00000003696	rab18b	100	96.585	Haplochromis_burtoni
ENSSDUG00000005960	rab18b	99	85.366	ENSHGLG00000004365	RAB18	99	85.366	Heterocephalus_glaber_female
ENSSDUG00000005960	rab18b	99	72.549	ENSHGLG00000007301	-	95	72.549	Heterocephalus_glaber_female
ENSSDUG00000005960	rab18b	99	72.549	ENSHGLG00100009117	-	95	72.549	Heterocephalus_glaber_male
ENSSDUG00000005960	rab18b	99	85.366	ENSHGLG00100013089	-	99	85.366	Heterocephalus_glaber_male
ENSSDUG00000005960	rab18b	100	94.634	ENSHCOG00000002217	rab18b	100	94.634	Hippocampus_comes
ENSSDUG00000005960	rab18b	99	85.784	ENSIPUG00000010859	rab18b	99	85.784	Ictalurus_punctatus
ENSSDUG00000005960	rab18b	99	84.878	ENSSTOG00000014560	-	99	84.878	Ictidomys_tridecemlineatus
ENSSDUG00000005960	rab18b	100	92.195	ENSKMAG00000007364	rab18b	100	92.195	Kryptolebias_marmoratus
ENSSDUG00000005960	rab18b	100	93.659	ENSLBEG00000019428	rab18b	100	93.659	Labrus_bergylta
ENSSDUG00000005960	rab18b	99	76.471	ENSLACG00000011256	rab18b	99	76.471	Latimeria_chalumnae
ENSSDUG00000005960	rab18b	94	86.458	ENSLAFG00000015582	RAB18	99	84.878	Loxodonta_africana
ENSSDUG00000005960	rab18b	99	84.878	ENSMFAG00000006430	RAB18	99	84.878	Macaca_fascicularis
ENSSDUG00000005960	rab18b	99	84.158	ENSMMUG00000046971	RAB18	72	84.158	Macaca_mulatta
ENSSDUG00000005960	rab18b	99	84.878	ENSMNEG00000038180	RAB18	99	84.878	Macaca_nemestrina
ENSSDUG00000005960	rab18b	99	84.878	ENSMLEG00000033595	RAB18	99	84.878	Mandrillus_leucophaeus
ENSSDUG00000005960	rab18b	99	95.098	ENSMAMG00000018445	rab18b	99	95.098	Mastacembelus_armatus
ENSSDUG00000005960	rab18b	100	96.585	ENSMZEG00005008244	rab18b	100	96.585	Maylandia_zebra
ENSSDUG00000005960	rab18b	99	75.490	ENSMAUG00000020698	-	99	75.490	Mesocricetus_auratus
ENSSDUG00000005960	rab18b	94	86.458	ENSMICG00000017280	RAB18	99	85.366	Microcebus_murinus
ENSSDUG00000005960	rab18b	99	84.878	ENSMOCG00000013044	Rab18	99	84.878	Microtus_ochrogaster
ENSSDUG00000005960	rab18b	100	77.419	ENSMMOG00000017849	rab18b	100	78.802	Mola_mola
ENSSDUG00000005960	rab18b	99	85.784	ENSMODG00000008253	RAB18	99	85.784	Monodelphis_domestica
ENSSDUG00000005960	rab18b	99	78.431	ENSMODG00000024936	-	99	78.431	Monodelphis_domestica
ENSSDUG00000005960	rab18b	99	95.588	ENSMALG00000005069	rab18b	99	95.588	Monopterus_albus
ENSSDUG00000005960	rab18b	99	84.878	MGP_CAROLIEiJ_G0021978	Rab18	99	84.878	Mus_caroli
ENSSDUG00000005960	rab18b	99	84.878	ENSMUSG00000073639	Rab18	99	84.878	Mus_musculus
ENSSDUG00000005960	rab18b	99	84.878	MGP_PahariEiJ_G0018716	Rab18	99	84.878	Mus_pahari
ENSSDUG00000005960	rab18b	99	84.878	MGP_SPRETEiJ_G0022894	Rab18	99	84.878	Mus_spretus
ENSSDUG00000005960	rab18b	99	84.878	ENSMPUG00000010592	RAB18	99	84.878	Mustela_putorius_furo
ENSSDUG00000005960	rab18b	99	74.043	ENSMLUG00000027295	RAB18	99	74.043	Myotis_lucifugus
ENSSDUG00000005960	rab18b	99	84.878	ENSNGAG00000001465	Rab18	99	84.878	Nannospalax_galili
ENSSDUG00000005960	rab18b	100	96.098	ENSNBRG00000008137	rab18b	100	96.098	Neolamprologus_brichardi
ENSSDUG00000005960	rab18b	99	84.878	ENSNLEG00000016970	RAB18	99	84.878	Nomascus_leucogenys
ENSSDUG00000005960	rab18b	99	84.878	ENSODEG00000004150	-	99	84.878	Octodon_degus
ENSSDUG00000005960	rab18b	100	96.098	ENSONIG00000018673	rab18b	100	96.098	Oreochromis_niloticus
ENSSDUG00000005960	rab18b	91	88.770	ENSOANG00000021391	RAB18	99	85.366	Ornithorhynchus_anatinus
ENSSDUG00000005960	rab18b	99	84.390	ENSOCUG00000022307	RAB18	99	84.390	Oryctolagus_cuniculus
ENSSDUG00000005960	rab18b	100	92.195	ENSORLG00000009609	rab18b	100	92.195	Oryzias_latipes
ENSSDUG00000005960	rab18b	100	92.195	ENSORLG00020011590	rab18b	100	92.195	Oryzias_latipes_hni
ENSSDUG00000005960	rab18b	100	92.195	ENSORLG00015007182	rab18b	100	92.195	Oryzias_latipes_hsok
ENSSDUG00000005960	rab18b	100	91.220	ENSOMEG00000007546	rab18b	100	91.220	Oryzias_melastigma
ENSSDUG00000005960	rab18b	94	86.458	ENSOGAG00000028015	RAB18	99	85.366	Otolemur_garnettii
ENSSDUG00000005960	rab18b	99	84.878	ENSOARG00000016208	RAB18	99	84.878	Ovis_aries
ENSSDUG00000005960	rab18b	99	84.878	ENSPPAG00000041625	RAB18	99	84.878	Pan_paniscus
ENSSDUG00000005960	rab18b	99	84.878	ENSPPRG00000010314	RAB18	99	84.878	Panthera_pardus
ENSSDUG00000005960	rab18b	99	84.878	ENSPTIG00000011667	RAB18	99	84.878	Panthera_tigris_altaica
ENSSDUG00000005960	rab18b	99	84.878	ENSPTRG00000002384	RAB18	99	84.878	Pan_troglodytes
ENSSDUG00000005960	rab18b	99	84.878	ENSPANG00000023005	RAB18	99	84.878	Papio_anubis
ENSSDUG00000005960	rab18b	98	85.294	ENSPMAG00000005322	rab18b	98	85.294	Petromyzon_marinus
ENSSDUG00000005960	rab18b	99	86.275	ENSPCIG00000028705	-	88	86.275	Phascolarctos_cinereus
ENSSDUG00000005960	rab18b	100	93.171	ENSPFOG00000013491	rab18b	100	93.171	Poecilia_formosa
ENSSDUG00000005960	rab18b	100	93.171	ENSPLAG00000019136	rab18b	100	93.171	Poecilia_latipinna
ENSSDUG00000005960	rab18b	100	93.171	ENSPMEG00000008223	rab18b	100	93.171	Poecilia_mexicana
ENSSDUG00000005960	rab18b	99	84.878	ENSPPYG00000002172	RAB18	99	84.878	Pongo_abelii
ENSSDUG00000005960	rab18b	94	86.458	ENSPCOG00000018906	RAB18	99	85.366	Propithecus_coquereli
ENSSDUG00000005960	rab18b	100	96.585	ENSPNYG00000001751	rab18b	100	96.585	Pundamilia_nyererei
ENSSDUG00000005960	rab18b	99	86.765	ENSPNAG00000002404	rab18b	99	86.765	Pygocentrus_nattereri
ENSSDUG00000005960	rab18b	99	84.878	ENSRNOG00000018972	Rab18	99	84.878	Rattus_norvegicus
ENSSDUG00000005960	rab18b	99	84.390	ENSRBIG00000035948	RAB18	99	84.390	Rhinopithecus_bieti
ENSSDUG00000005960	rab18b	99	84.878	ENSRROG00000040563	RAB18	99	84.878	Rhinopithecus_roxellana
ENSSDUG00000005960	rab18b	99	86.275	ENSSHAG00000007613	RAB18	99	86.275	Sarcophilus_harrisii
ENSSDUG00000005960	rab18b	100	98.049	ENSSMAG00000011814	rab18b	100	98.049	Scophthalmus_maximus
ENSSDUG00000005960	rab18b	100	100.000	ENSSLDG00000006014	rab18b	100	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000005960	rab18b	100	97.073	ENSSPAG00000020875	rab18b	100	97.073	Stegastes_partitus
ENSSDUG00000005960	rab18b	99	84.878	ENSSSCG00000028655	RAB18	99	84.878	Sus_scrofa
ENSSDUG00000005960	rab18b	94	75.799	ENSTGUG00000001105	-	99	74.678	Taeniopygia_guttata
ENSSDUG00000005960	rab18b	100	89.756	ENSTRUG00000004283	rab18b	100	89.756	Takifugu_rubripes
ENSSDUG00000005960	rab18b	100	88.350	ENSTNIG00000007882	rab18b	100	88.350	Tetraodon_nigroviridis
ENSSDUG00000005960	rab18b	99	84.878	ENSVVUG00000001705	RAB18	99	84.878	Vulpes_vulpes
ENSSDUG00000005960	rab18b	100	92.683	ENSXMAG00000006945	rab18b	100	92.683	Xiphophorus_maculatus