EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000005987 (Gene tree)
Gene ID: 111230476
Gene Symbol: -
Alias: -
Full Name: H/ACA ribonucleoprotein complex non-core subunit NAF1-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 12337 bases
Position: chrBDQW01000267.1:1860759-1873095
Accession: 111230476
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000008155	Gar1	PF04410.14	5.5e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000008302	-	3662	XM_022757225	ENSSDUP00000008155	413 (aa)	XP_022612946	UPI000BBEAF8D

Gene Model

Click here to download ENSSDUG00000005987's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000005987's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000005987	-	63	46.316	ENSG00000145414	NAF1	95	62.500	Homo_sapiens
ENSSDUG00000005987	-	98	68.215	ENSAPOG00000007663	-	97	66.019	Acanthochromis_polyacanthus
ENSSDUG00000005987	-	62	43.885	ENSAMEG00000014688	NAF1	50	46.281	Ailuropoda_melanoleuca
ENSSDUG00000005987	-	98	67.813	ENSAOCG00000003518	-	98	66.259	Amphiprion_ocellaris
ENSSDUG00000005987	-	97	68.238	ENSAPEG00000004453	-	97	66.990	Amphiprion_percula
ENSSDUG00000005987	-	93	64.045	ENSATEG00000003514	-	56	75.563	Anabas_testudineus
ENSSDUG00000005987	-	62	44.604	ENSANAG00000025253	NAF1	93	62.500	Aotus_nancymaae
ENSSDUG00000005987	-	97	61.029	ENSACLG00000017092	-	79	62.108	Astatotilapia_calliptera
ENSSDUG00000005987	-	62	42.053	ENSCJAG00000012406	NAF1	95	62.500	Callithrix_jacchus
ENSSDUG00000005987	-	50	41.778	ENSCAFG00000029679	NAF1	51	52.318	Canis_familiaris
ENSSDUG00000005987	-	63	44.056	ENSTSYG00000005946	NAF1	84	63.889	Carlito_syrichta
ENSSDUG00000005987	-	64	43.750	ENSCAPG00000017838	NAF1	92	54.902	Cavia_aperea
ENSSDUG00000005987	-	64	44.118	ENSCPOG00000010331	NAF1	70	46.403	Cavia_porcellus
ENSSDUG00000005987	-	62	44.964	ENSCCAG00000030023	NAF1	95	62.500	Cebus_capucinus
ENSSDUG00000005987	-	63	46.831	ENSCATG00000022663	NAF1	95	62.500	Cercocebus_atys
ENSSDUG00000005987	-	64	43.972	ENSCLAG00000017209	NAF1	52	46.610	Chinchilla_lanigera
ENSSDUG00000005987	-	63	46.831	ENSCSAG00000003199	NAF1	51	47.843	Chlorocebus_sabaeus
ENSSDUG00000005987	-	67	40.397	ENSCHOG00000011393	NAF1	60	41.275	Choloepus_hoffmanni
ENSSDUG00000005987	-	63	46.479	ENSCANG00000039151	NAF1	95	62.500	Colobus_angolensis_palliatus
ENSSDUG00000005987	-	75	45.161	ENSCGRG00001018484	Naf1	74	51.613	Cricetulus_griseus_chok1gshd
ENSSDUG00000005987	-	76	45.333	ENSCGRG00000001742	Naf1	91	52.315	Cricetulus_griseus_crigri
ENSSDUG00000005987	-	72	61.364	ENSCSEG00000010914	-	52	66.531	Cynoglossus_semilaevis
ENSSDUG00000005987	-	78	59.627	ENSCVAG00000003483	-	94	57.419	Cyprinodon_variegatus
ENSSDUG00000005987	-	73	44.839	ENSDARG00000057929	naf1	57	42.623	Danio_rerio
ENSSDUG00000005987	-	63	42.958	ENSFCAG00000031652	NAF1	54	45.868	Felis_catus
ENSSDUG00000005987	-	85	61.143	ENSFHEG00000015835	-	65	61.801	Fundulus_heteroclitus
ENSSDUG00000005987	-	63	43.772	ENSGALG00000009496	NAF1	54	47.034	Gallus_gallus
ENSSDUG00000005987	-	95	56.355	ENSGAFG00000017883	-	61	65.300	Gambusia_affinis
ENSSDUG00000005987	-	63	45.965	ENSGGOG00000000894	NAF1	95	62.500	Gorilla_gorilla
ENSSDUG00000005987	-	66	66.909	ENSHBUG00000002404	-	93	64.966	Haplochromis_burtoni
ENSSDUG00000005987	-	64	43.116	ENSHGLG00000014899	NAF1	53	44.922	Heterocephalus_glaber_female
ENSSDUG00000005987	-	64	43.116	ENSHGLG00100007507	NAF1	53	44.922	Heterocephalus_glaber_male
ENSSDUG00000005987	-	71	58.416	ENSHCOG00000001581	-	62	62.903	Hippocampus_comes
ENSSDUG00000005987	-	64	45.230	ENSSTOG00000023858	NAF1	53	45.455	Ictidomys_tridecemlineatus
ENSSDUG00000005987	-	64	45.890	ENSJJAG00000012147	-	72	47.692	Jaculus_jaculus
ENSSDUG00000005987	-	70	68.750	ENSKMAG00000005434	-	50	69.106	Kryptolebias_marmoratus
ENSSDUG00000005987	-	85	72.176	ENSLBEG00000020414	-	85	70.799	Labrus_bergylta
ENSSDUG00000005987	-	63	46.831	ENSMFAG00000040952	NAF1	95	62.500	Macaca_fascicularis
ENSSDUG00000005987	-	63	46.831	ENSMMUG00000001717	NAF1	95	62.500	Macaca_mulatta
ENSSDUG00000005987	-	63	46.831	ENSMNEG00000032677	NAF1	95	62.500	Macaca_nemestrina
ENSSDUG00000005987	-	63	47.183	ENSMLEG00000035330	NAF1	95	62.500	Mandrillus_leucophaeus
ENSSDUG00000005987	-	70	81.034	ENSMAMG00000003269	-	97	78.966	Mastacembelus_armatus
ENSSDUG00000005987	-	97	61.330	ENSMZEG00005005830	-	82	62.108	Maylandia_zebra
ENSSDUG00000005987	-	77	47.163	ENSMAUG00000013072	Naf1	79	47.331	Mesocricetus_auratus
ENSSDUG00000005987	-	62	44.964	ENSMICG00000038661	NAF1	84	61.111	Microcebus_murinus
ENSSDUG00000005987	-	81	59.149	ENSMMOG00000016895	-	75	52.174	Mola_mola
ENSSDUG00000005987	-	97	74.750	ENSMALG00000018482	-	83	74.750	Monopterus_albus
ENSSDUG00000005987	-	59	65.714	ENSNBRG00000009348	-	99	64.228	Neolamprologus_brichardi
ENSSDUG00000005987	-	53	48.707	ENSNLEG00000006459	-	95	62.500	Nomascus_leucogenys
ENSSDUG00000005987	-	64	42.857	ENSODEG00000006528	NAF1	50	52.915	Octodon_degus
ENSSDUG00000005987	-	60	73.171	ENSONIG00000001826	-	69	74.590	Oreochromis_niloticus
ENSSDUG00000005987	-	50	48.684	ENSOANG00000014157	-	58	48.684	Ornithorhynchus_anatinus
ENSSDUG00000005987	-	71	61.415	ENSORLG00015012985	-	58	59.938	Oryzias_latipes_hsok
ENSSDUG00000005987	-	63	45.965	ENSPPAG00000034674	NAF1	95	62.500	Pan_paniscus
ENSSDUG00000005987	-	63	45.965	ENSPTRG00000016560	NAF1	95	62.500	Pan_troglodytes
ENSSDUG00000005987	-	63	46.479	ENSPANG00000015574	NAF1	95	62.500	Papio_anubis
ENSSDUG00000005987	-	54	53.097	ENSPKIG00000019687	NAF1	60	45.570	Paramormyrops_kingsleyae
ENSSDUG00000005987	-	61	42.908	ENSPSIG00000006545	NAF1	60	48.498	Pelodiscus_sinensis
ENSSDUG00000005987	-	77	46.333	ENSPEMG00000014321	Naf1	84	53.182	Peromyscus_maniculatus_bairdii
ENSSDUG00000005987	-	95	58.853	ENSPFOG00000010705	-	68	65.759	Poecilia_formosa
ENSSDUG00000005987	-	95	59.352	ENSPLAG00000002200	-	63	65.723	Poecilia_latipinna
ENSSDUG00000005987	-	95	59.352	ENSPMEG00000004437	-	63	64.780	Poecilia_mexicana
ENSSDUG00000005987	-	95	59.850	ENSPREG00000022551	-	63	66.667	Poecilia_reticulata
ENSSDUG00000005987	-	52	45.259	ENSPPYG00000029771	-	70	46.305	Pongo_abelii
ENSSDUG00000005987	-	97	52.927	ENSPNYG00000021456	-	51	78.481	Pundamilia_nyererei
ENSSDUG00000005987	-	76	48.276	ENSRBIG00000030027	NAF1	95	62.500	Rhinopithecus_bieti
ENSSDUG00000005987	-	63	47.183	ENSRROG00000040912	NAF1	95	62.500	Rhinopithecus_roxellana
ENSSDUG00000005987	-	62	45.324	ENSSBOG00000002085	NAF1	95	62.500	Saimiri_boliviensis_boliviensis
ENSSDUG00000005987	-	97	73.659	ENSSMAG00000015529	-	90	75.328	Scophthalmus_maximus
ENSSDUG00000005987	-	68	43.729	ENSSSCG00000008887	NAF1	60	46.403	Sus_scrofa
ENSSDUG00000005987	-	70	67.241	ENSTRUG00000011908	-	61	72.294	Takifugu_rubripes
ENSSDUG00000005987	-	61	44.318	ENSTTRG00000010106	NAF1	53	45.570	Tursiops_truncatus
ENSSDUG00000005987	-	62	43.525	ENSUAMG00000017043	NAF1	54	44.444	Ursus_americanus
ENSSDUG00000005987	-	62	43.165	ENSUMAG00000019748	NAF1	50	45.455	Ursus_maritimus
ENSSDUG00000005987	-	59	44.402	ENSVVUG00000022303	NAF1	50	54.054	Vulpes_vulpes
ENSSDUG00000005987	-	62	62.205	ENSXCOG00000013058	-	72	63.265	Xiphophorus_couchianus
ENSSDUG00000005987	-	95	62.312	ENSXMAG00000011494	-	64	68.553	Xiphophorus_maculatus