EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000006133 (Gene tree)
Gene ID: 111224798
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 135-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 5666 bases
Position: chrBDQW01000138.1:9451683-9457348
Accession: 111224798
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000008358	zf-C2H2	PF00096.26	1e-49	1	9
ENSSDUP00000008358	zf-C2H2	PF00096.26	1e-49	2	9
ENSSDUP00000008358	zf-C2H2	PF00096.26	1e-49	3	9
ENSSDUP00000008358	zf-C2H2	PF00096.26	1e-49	4	9
ENSSDUP00000008358	zf-C2H2	PF00096.26	1e-49	5	9
ENSSDUP00000008358	zf-C2H2	PF00096.26	1e-49	6	9
ENSSDUP00000008358	zf-C2H2	PF00096.26	1e-49	7	9
ENSSDUP00000008358	zf-C2H2	PF00096.26	1e-49	8	9
ENSSDUP00000008358	zf-C2H2	PF00096.26	1e-49	9	9
ENSSDUP00000008358	zf-met	PF12874.7	1.4e-12	1	3
ENSSDUP00000008358	zf-met	PF12874.7	1.4e-12	2	3
ENSSDUP00000008358	zf-met	PF12874.7	1.4e-12	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000008509	-	3047	XM_022749445	ENSSDUP00000008358	787 (aa)	XP_022605166	UPI000BBE35C7

Gene Model

Click here to download ENSSDUG00000006133's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000006133's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000006133	-	60	40.777	ENSSDUG00000009601	-	92	51.724
ENSSDUG00000006133	-	97	36.842	ENSSDUG00000016734	-	89	40.175
ENSSDUG00000006133	-	54	38.356	ENSSDUG00000000786	-	95	44.578
ENSSDUG00000006133	-	52	39.286	ENSSDUG00000011170	znf236	54	39.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000006133	-	57	44.512	ENSAPOG00000001725	-	96	38.028	Acanthochromis_polyacanthus
ENSSDUG00000006133	-	51	42.690	ENSAPOG00000013212	-	100	43.333	Acanthochromis_polyacanthus
ENSSDUG00000006133	-	50	45.679	ENSAPOG00000002691	-	59	44.186	Acanthochromis_polyacanthus
ENSSDUG00000006133	-	66	41.624	ENSAPOG00000020864	-	69	39.823	Acanthochromis_polyacanthus
ENSSDUG00000006133	-	64	41.624	ENSACIG00000004666	-	99	41.219	Amphilophus_citrinellus
ENSSDUG00000006133	-	51	43.836	ENSAOCG00000015586	-	85	42.540	Amphiprion_ocellaris
ENSSDUG00000006133	-	64	40.271	ENSAOCG00000014651	-	50	42.991	Amphiprion_ocellaris
ENSSDUG00000006133	-	53	44.928	ENSAPEG00000005462	-	86	40.435	Amphiprion_percula
ENSSDUG00000006133	-	53	41.880	ENSAPEG00000007389	-	97	50.000	Amphiprion_percula
ENSSDUG00000006133	-	100	79.670	ENSCSEG00000009915	-	100	79.880	Cynoglossus_semilaevis
ENSSDUG00000006133	-	50	40.663	ENSCVAG00000013337	-	90	42.244	Cyprinodon_variegatus
ENSSDUG00000006133	-	94	38.432	ENSDARG00000095332	si:dkey-14d8.1	96	37.087	Danio_rerio
ENSSDUG00000006133	-	55	39.803	ENSEBUG00000014050	-	74	42.105	Eptatretus_burgeri
ENSSDUG00000006133	-	55	38.868	ENSEBUG00000007012	-	94	39.373	Eptatretus_burgeri
ENSSDUG00000006133	-	53	40.000	ENSEBUG00000002371	-	70	39.544	Eptatretus_burgeri
ENSSDUG00000006133	-	84	76.992	ENSFHEG00000018423	-	99	76.692	Fundulus_heteroclitus
ENSSDUG00000006133	-	99	78.535	ENSGAFG00000018340	-	99	77.778	Gambusia_affinis
ENSSDUG00000006133	-	100	84.567	ENSLBEG00000001920	-	100	84.442	Labrus_bergylta
ENSSDUG00000006133	-	99	89.075	ENSMAMG00000009555	-	100	89.075	Mastacembelus_armatus
ENSSDUG00000006133	-	57	42.705	ENSMMOG00000000299	-	100	42.857	Mola_mola
ENSSDUG00000006133	-	51	42.478	ENSMALG00000020889	-	95	43.651	Monopterus_albus
ENSSDUG00000006133	-	52	40.068	ENSMALG00000003975	-	93	40.230	Monopterus_albus
ENSSDUG00000006133	-	98	88.810	ENSORLG00015017255	-	100	79.442	Oryzias_latipes_hsok
ENSSDUG00000006133	-	50	48.148	ENSOMEG00000002268	-	89	40.690	Oryzias_melastigma
ENSSDUG00000006133	-	55	34.708	ENSOMEG00000022975	-	62	36.220	Oryzias_melastigma
ENSSDUG00000006133	-	98	67.655	ENSPMGG00000023739	-	79	90.286	Periophthalmus_magnuspinnatus
ENSSDUG00000006133	-	61	40.000	ENSPFOG00000020393	-	63	39.516	Poecilia_formosa
ENSSDUG00000006133	-	99	78.834	ENSPFOG00000016324	-	99	78.173	Poecilia_formosa
ENSSDUG00000006133	-	99	78.834	ENSPLAG00000001279	-	99	78.173	Poecilia_latipinna
ENSSDUG00000006133	-	61	40.000	ENSPMEG00000020642	-	63	39.516	Poecilia_mexicana
ENSSDUG00000006133	-	99	79.315	ENSPMEG00000016548	-	99	78.173	Poecilia_mexicana
ENSSDUG00000006133	-	55	42.222	ENSSMAG00000006197	-	100	40.066	Scophthalmus_maximus
ENSSDUG00000006133	-	100	89.962	ENSSMAG00000000183	-	100	89.962	Scophthalmus_maximus
ENSSDUG00000006133	-	100	99.238	ENSSLDG00000010460	-	100	99.238	Seriola_lalandi_dorsalis
ENSSDUG00000006133	-	50	42.857	ENSSLDG00000005839	-	71	42.857	Seriola_lalandi_dorsalis
ENSSDUG00000006133	-	100	86.785	ENSSPAG00000013319	-	99	86.785	Stegastes_partitus
ENSSDUG00000006133	-	51	42.012	ENSXCOG00000007979	-	71	42.262	Xiphophorus_couchianus
ENSSDUG00000006133	-	99	77.820	ENSXMAG00000024928	-	99	77.665	Xiphophorus_maculatus