EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000006168 (Gene tree)
Gene ID: 111232645
Gene Symbol: trmt12
Alias: zgc:153361
Full Name: tRNA methyltransferase 12 homolog
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 4203 bases
Position: chrBDQW01000331.1:9041732-9045934
Accession: 111232645
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000008459	MTS	PF05175.14	1.1e-05	1	1
ENSSDUP00000008459	Met_10	PF02475.16	1.2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000008610	-	1206	XM_022760256	ENSSDUP00000008459	401 (aa)	XP_022615977	-

Gene Model

Click here to download ENSSDUG00000006168's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000006168's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000006168	trmt12	96	52.580	ENSG00000183665	TRMT12	91	52.580	Homo_sapiens
ENSSDUG00000006168	trmt12	100	82.222	ENSAPOG00000011979	trmt12	100	82.222	Acanthochromis_polyacanthus
ENSSDUG00000006168	trmt12	96	51.843	ENSAMEG00000019612	TRMT12	91	51.843	Ailuropoda_melanoleuca
ENSSDUG00000006168	trmt12	96	82.124	ENSACIG00000012982	trmt12	100	82.124	Amphilophus_citrinellus
ENSSDUG00000006168	trmt12	100	83.582	ENSAOCG00000020570	trmt12	100	83.582	Amphiprion_ocellaris
ENSSDUG00000006168	trmt12	100	84.577	ENSAPEG00000006335	trmt12	100	84.577	Amphiprion_percula
ENSSDUG00000006168	trmt12	100	83.210	ENSATEG00000018316	trmt12	100	83.210	Anabas_testudineus
ENSSDUG00000006168	trmt12	100	78.025	ENSACLG00000001008	trmt12	100	78.025	Astatotilapia_calliptera
ENSSDUG00000006168	trmt12	99	58.571	ENSAMXG00000040366	trmt12	99	58.571	Astyanax_mexicanus
ENSSDUG00000006168	trmt12	94	52.000	ENSBTAG00000020398	TRMT12	87	52.000	Bos_taurus
ENSSDUG00000006168	trmt12	96	49.879	ENSCJAG00000022174	TRMT12	92	49.879	Callithrix_jacchus
ENSSDUG00000006168	trmt12	94	51.621	ENSCAFG00000001040	TRMT12	91	51.621	Canis_familiaris
ENSSDUG00000006168	trmt12	94	51.621	ENSCAFG00020006500	TRMT12	91	51.621	Canis_lupus_dingo
ENSSDUG00000006168	trmt12	96	50.739	ENSCHIG00000016574	TRMT12	93	50.739	Capra_hircus
ENSSDUG00000006168	trmt12	92	52.174	ENSCPOG00000026520	TRMT12	88	52.174	Cavia_porcellus
ENSSDUG00000006168	trmt12	92	53.553	ENSCSAG00000018615	TRMT12	88	53.553	Chlorocebus_sabaeus
ENSSDUG00000006168	trmt12	96	52.506	ENSCPBG00000014290	TRMT12	91	52.506	Chrysemys_picta_bellii
ENSSDUG00000006168	trmt12	72	46.075	ENSCING00000019633	-	97	46.075	Ciona_intestinalis
ENSSDUG00000006168	trmt12	75	47.697	ENSCSAVG00000000415	-	95	47.697	Ciona_savignyi
ENSSDUG00000006168	trmt12	91	51.596	ENSCGRG00001014834	Trmt12	89	51.596	Cricetulus_griseus_chok1gshd
ENSSDUG00000006168	trmt12	99	70.588	ENSCSEG00000002675	trmt12	95	70.588	Cynoglossus_semilaevis
ENSSDUG00000006168	trmt12	100	73.333	ENSCVAG00000005590	trmt12	100	73.333	Cyprinodon_variegatus
ENSSDUG00000006168	trmt12	99	60.880	ENSDARG00000060338	trmt12	99	60.880	Danio_rerio
ENSSDUG00000006168	trmt12	92	51.015	ENSETEG00000009373	TRMT12	88	51.015	Echinops_telfairi
ENSSDUG00000006168	trmt12	96	51.220	ENSEASG00005022441	TRMT12	93	51.220	Equus_asinus_asinus
ENSSDUG00000006168	trmt12	96	50.000	ENSEEUG00000004844	TRMT12	91	50.000	Erinaceus_europaeus
ENSSDUG00000006168	trmt12	99	65.764	ENSELUG00000004240	trmt12	99	66.310	Esox_lucius
ENSSDUG00000006168	trmt12	65	57.597	ENSFALG00000003825	TRMT12	93	67.157	Ficedula_albicollis
ENSSDUG00000006168	trmt12	96	50.860	ENSFDAG00000016647	TRMT12	93	50.860	Fukomys_damarensis
ENSSDUG00000006168	trmt12	94	66.048	ENSFHEG00000017338	trmt12	96	66.048	Fundulus_heteroclitus
ENSSDUG00000006168	trmt12	83	56.534	ENSGALG00000006773	TRMT12	77	56.534	Gallus_gallus
ENSSDUG00000006168	trmt12	100	75.556	ENSGAFG00000020056	trmt12	100	75.556	Gambusia_affinis
ENSSDUG00000006168	trmt12	96	75.711	ENSGACG00000017351	trmt12	99	75.711	Gasterosteus_aculeatus
ENSSDUG00000006168	trmt12	96	53.494	ENSGAGG00000006032	TRMT12	93	53.494	Gopherus_agassizii
ENSSDUG00000006168	trmt12	100	77.778	ENSHBUG00000016412	trmt12	100	77.778	Haplochromis_burtoni
ENSSDUG00000006168	trmt12	96	49.755	ENSHGLG00000020498	TRMT12	93	49.755	Heterocephalus_glaber_female
ENSSDUG00000006168	trmt12	96	50.490	ENSHGLG00100020132	TRMT12	93	50.490	Heterocephalus_glaber_male
ENSSDUG00000006168	trmt12	100	70.617	ENSHCOG00000005050	trmt12	96	76.506	Hippocampus_comes
ENSSDUG00000006168	trmt12	99	59.024	ENSIPUG00000018011	trmt12	92	59.024	Ictalurus_punctatus
ENSSDUG00000006168	trmt12	97	50.843	ENSSTOG00000030617	TRMT12	94	50.843	Ictidomys_tridecemlineatus
ENSSDUG00000006168	trmt12	99	77.094	ENSKMAG00000000891	trmt12	99	77.094	Kryptolebias_marmoratus
ENSSDUG00000006168	trmt12	54	81.193	ENSLBEG00000017456	-	89	81.193	Labrus_bergylta
ENSSDUG00000006168	trmt12	100	73.827	ENSLBEG00000028712	trmt12	100	73.827	Labrus_bergylta
ENSSDUG00000006168	trmt12	98	50.835	ENSLACG00000015869	TRMT12	93	50.835	Latimeria_chalumnae
ENSSDUG00000006168	trmt12	98	56.784	ENSLOCG00000015290	trmt12	97	56.784	Lepisosteus_oculatus
ENSSDUG00000006168	trmt12	94	52.120	ENSLAFG00000012519	TRMT12	91	52.120	Loxodonta_africana
ENSSDUG00000006168	trmt12	92	53.046	ENSMMUG00000015490	TRMT12	88	53.046	Macaca_mulatta
ENSSDUG00000006168	trmt12	99	79.901	ENSMAMG00000020311	trmt12	99	79.901	Mastacembelus_armatus
ENSSDUG00000006168	trmt12	100	78.025	ENSMZEG00005007349	trmt12	100	78.025	Maylandia_zebra
ENSSDUG00000006168	trmt12	97	51.220	ENSMGAG00000004174	TRMT12	92	51.220	Meleagris_gallopavo
ENSSDUG00000006168	trmt12	99	79.302	ENSMMOG00000000412	trmt12	99	79.302	Mola_mola
ENSSDUG00000006168	trmt12	98	50.990	ENSMODG00000011798	-	85	50.990	Monodelphis_domestica
ENSSDUG00000006168	trmt12	97	52.130	ENSMODG00000021403	-	92	52.130	Monodelphis_domestica
ENSSDUG00000006168	trmt12	100	81.975	ENSMALG00000008668	trmt12	100	81.975	Monopterus_albus
ENSSDUG00000006168	trmt12	92	51.276	MGP_CAROLIEiJ_G0019820	Trmt12	88	51.276	Mus_caroli
ENSSDUG00000006168	trmt12	92	52.296	ENSMUSG00000037085	Trmt12	88	52.296	Mus_musculus
ENSSDUG00000006168	trmt12	96	51.970	MGP_PahariEiJ_G0019829	Trmt12	91	51.970	Mus_pahari
ENSSDUG00000006168	trmt12	92	51.786	MGP_SPRETEiJ_G0020717	Trmt12	88	51.786	Mus_spretus
ENSSDUG00000006168	trmt12	96	51.843	ENSMPUG00000019150	TRMT12	91	51.843	Mustela_putorius_furo
ENSSDUG00000006168	trmt12	96	50.725	ENSMLUG00000003753	TRMT12	94	50.725	Myotis_lucifugus
ENSSDUG00000006168	trmt12	96	49.877	ENSNGAG00000014548	Trmt12	93	49.877	Nannospalax_galili
ENSSDUG00000006168	trmt12	100	77.171	ENSNBRG00000021510	trmt12	100	77.171	Neolamprologus_brichardi
ENSSDUG00000006168	trmt12	92	48.601	ENSOPRG00000008067	TRMT12	88	48.601	Ochotona_princeps
ENSSDUG00000006168	trmt12	92	52.926	ENSODEG00000018933	TRMT12	90	52.926	Octodon_degus
ENSSDUG00000006168	trmt12	100	80.000	ENSONIG00000002614	trmt12	100	80.000	Oreochromis_niloticus
ENSSDUG00000006168	trmt12	98	46.715	ENSOANG00000009987	TRMT12	96	46.715	Ornithorhynchus_anatinus
ENSSDUG00000006168	trmt12	92	47.848	ENSOCUG00000026379	TRMT12	88	47.848	Oryctolagus_cuniculus
ENSSDUG00000006168	trmt12	100	73.827	ENSORLG00000001280	trmt12	100	73.827	Oryzias_latipes
ENSSDUG00000006168	trmt12	100	73.580	ENSORLG00020000708	trmt12	100	73.580	Oryzias_latipes_hni
ENSSDUG00000006168	trmt12	100	73.580	ENSORLG00015012344	trmt12	100	73.580	Oryzias_latipes_hsok
ENSSDUG00000006168	trmt12	100	72.840	ENSOMEG00000015267	trmt12	98	72.840	Oryzias_melastigma
ENSSDUG00000006168	trmt12	92	52.417	ENSOGAG00000015845	TRMT12	90	52.417	Otolemur_garnettii
ENSSDUG00000006168	trmt12	99	60.644	ENSPKIG00000004640	trmt12	99	60.644	Paramormyrops_kingsleyae
ENSSDUG00000006168	trmt12	59	60.223	ENSPSIG00000003476	TRMT12	99	60.223	Pelodiscus_sinensis
ENSSDUG00000006168	trmt12	99	65.842	ENSPMGG00000016356	trmt12	97	65.842	Periophthalmus_magnuspinnatus
ENSSDUG00000006168	trmt12	97	53.133	ENSPCIG00000002967	TRMT12	85	53.133	Phascolarctos_cinereus
ENSSDUG00000006168	trmt12	96	75.065	ENSPFOG00000016931	trmt12	94	75.065	Poecilia_formosa
ENSSDUG00000006168	trmt12	100	74.074	ENSPLAG00000020621	trmt12	100	74.074	Poecilia_latipinna
ENSSDUG00000006168	trmt12	100	75.556	ENSPMEG00000000818	trmt12	100	75.556	Poecilia_mexicana
ENSSDUG00000006168	trmt12	100	75.309	ENSPREG00000011621	trmt12	100	75.556	Poecilia_reticulata
ENSSDUG00000006168	trmt12	92	53.690	ENSPPYG00000018866	TRMT12	88	53.690	Pongo_abelii
ENSSDUG00000006168	trmt12	96	51.597	ENSPCAG00000000556	TRMT12	91	51.597	Procavia_capensis
ENSSDUG00000006168	trmt12	96	50.614	ENSPVAG00000009149	TRMT12	91	50.614	Pteropus_vampyrus
ENSSDUG00000006168	trmt12	96	79.016	ENSPNYG00000010696	trmt12	100	79.016	Pundamilia_nyererei
ENSSDUG00000006168	trmt12	99	58.473	ENSPNAG00000019028	trmt12	99	58.473	Pygocentrus_nattereri
ENSSDUG00000006168	trmt12	96	51.232	ENSRNOG00000008978	Trmt12	93	51.232	Rattus_norvegicus
ENSSDUG00000006168	trmt12	97	50.627	ENSSHAG00000003345	TRMT12	92	50.627	Sarcophilus_harrisii
ENSSDUG00000006168	trmt12	99	55.288	ENSSFOG00015006090	trmt12	99	55.288	Scleropages_formosus
ENSSDUG00000006168	trmt12	99	84.406	ENSSMAG00000013247	trmt12	99	84.406	Scophthalmus_maximus
ENSSDUG00000006168	trmt12	100	97.037	ENSSLDG00000025007	trmt12	100	97.037	Seriola_lalandi_dorsalis
ENSSDUG00000006168	trmt12	96	51.807	ENSSPUG00000005321	TRMT12	92	51.807	Sphenodon_punctatus
ENSSDUG00000006168	trmt12	100	83.457	ENSSPAG00000009435	trmt12	97	83.457	Stegastes_partitus
ENSSDUG00000006168	trmt12	99	49.522	ENSTGUG00000002280	TRMT12	99	50.120	Taeniopygia_guttata
ENSSDUG00000006168	trmt12	99	74.074	ENSTRUG00000011548	trmt12	99	74.074	Takifugu_rubripes
ENSSDUG00000006168	trmt12	99	69.512	ENSTNIG00000016866	trmt12	99	69.512	Tetraodon_nigroviridis
ENSSDUG00000006168	trmt12	96	51.351	ENSUAMG00000002067	TRMT12	93	51.351	Ursus_americanus
ENSSDUG00000006168	trmt12	92	52.538	ENSVPAG00000006519	TRMT12	88	52.538	Vicugna_pacos
ENSSDUG00000006168	trmt12	96	50.735	ENSVVUG00000016790	TRMT12	91	50.735	Vulpes_vulpes
ENSSDUG00000006168	trmt12	99	52.357	ENSXETG00000009641	trmt12	95	52.357	Xenopus_tropicalis
ENSSDUG00000006168	trmt12	100	73.710	ENSXCOG00000016505	trmt12	100	73.710	Xiphophorus_couchianus
ENSSDUG00000006168	trmt12	100	74.384	ENSXMAG00000025318	trmt12	100	74.384	Xiphophorus_maculatus