EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000006183 (Gene tree)
Gene ID: 111230122
Gene Symbol: adar
Alias: drada|red1|wu:fc22a02
Full Name: adenosine deaminase%2C RNA specific
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 16515 bases
Position: chrBDQW01000258.1:428785-445299
Accession: 111230122
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000008414	z-alpha	PF02295.17	3.3e-23	1	2
ENSSDUP00000008414	z-alpha	PF02295.17	3.3e-23	2	2
ENSSDUP00000008429	z-alpha	PF02295.17	3.3e-23	1	2
ENSSDUP00000008429	z-alpha	PF02295.17	3.3e-23	2	2
ENSSDUP00000008414	dsrm	PF00035.26	1.1e-40	1	3
ENSSDUP00000008414	dsrm	PF00035.26	1.1e-40	2	3
ENSSDUP00000008414	dsrm	PF00035.26	1.1e-40	3	3
ENSSDUP00000008429	dsrm	PF00035.26	1.1e-40	1	3
ENSSDUP00000008429	dsrm	PF00035.26	1.1e-40	2	3
ENSSDUP00000008429	dsrm	PF00035.26	1.1e-40	3	3
ENSSDUP00000008414	A_deamin	PF02137.18	2.6e-110	1	1
ENSSDUP00000008429	A_deamin	PF02137.18	2.6e-110	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000008579	-	7086	XM_022756709	ENSSDUP00000008429	1387 (aa)	XP_022612430	UPI000BBEBFB4
ENSSDUT00000008564	-	7134	-	ENSSDUP00000008414	1387 (aa)	-	UPI000BBEBFB4

Gene Model

Click here to download ENSSDUG00000006183's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000006183's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000006183	adar	91	44.012	ENSG00000160710	ADAR	75	74.797	Homo_sapiens
ENSSDUG00000006183	adar	99	76.403	ENSAPOG00000023804	adar	99	76.906	Acanthochromis_polyacanthus
ENSSDUG00000006183	adar	79	47.126	ENSAMEG00000011594	ADAR	79	50.766	Ailuropoda_melanoleuca
ENSSDUG00000006183	adar	69	66.131	ENSACIG00000008672	adar	99	67.203	Amphilophus_citrinellus
ENSSDUG00000006183	adar	99	76.896	ENSAOCG00000020750	adar	99	77.539	Amphiprion_ocellaris
ENSSDUG00000006183	adar	99	76.753	ENSAPEG00000004762	adar	99	77.539	Amphiprion_percula
ENSSDUG00000006183	adar	100	82.853	ENSATEG00000023684	adar	100	82.709	Anabas_testudineus
ENSSDUG00000006183	adar	68	53.018	ENSAPLG00000009658	ADAR	89	52.472	Anas_platyrhynchos
ENSSDUG00000006183	adar	79	46.620	ENSANAG00000007524	ADAR	99	50.000	Aotus_nancymaae
ENSSDUG00000006183	adar	99	78.179	ENSACLG00000019448	adar	99	77.962	Astatotilapia_calliptera
ENSSDUG00000006183	adar	98	55.967	ENSAMXG00000016460	adar	99	55.602	Astyanax_mexicanus
ENSSDUG00000006183	adar	91	44.602	ENSBTAG00000007519	ADAR	80	50.999	Bos_taurus
ENSSDUG00000006183	adar	91	42.194	ENSCJAG00000009410	ADAR	69	49.849	Callithrix_jacchus
ENSSDUG00000006183	adar	91	44.479	ENSCAFG00000017169	ADAR	81	51.667	Canis_familiaris
ENSSDUG00000006183	adar	82	58.696	ENSCAFG00020008204	ADAR	79	50.560	Canis_lupus_dingo
ENSSDUG00000006183	adar	91	43.619	ENSCHIG00000017156	ADAR	79	48.543	Capra_hircus
ENSSDUG00000006183	adar	67	50.361	ENSTSYG00000013129	ADAR	99	50.617	Carlito_syrichta
ENSSDUG00000006183	adar	80	46.000	ENSCAPG00000016091	ADAR	80	50.051	Cavia_aperea
ENSSDUG00000006183	adar	80	46.335	ENSCPOG00000005463	ADAR	82	50.154	Cavia_porcellus
ENSSDUG00000006183	adar	91	42.878	ENSCCAG00000028498	ADAR	74	49.697	Cebus_capucinus
ENSSDUG00000006183	adar	91	43.598	ENSCATG00000028528	ADAR	89	45.972	Cercocebus_atys
ENSSDUG00000006183	adar	67	50.561	ENSCLAG00000005402	ADAR	99	50.408	Chinchilla_lanigera
ENSSDUG00000006183	adar	67	50.154	ENSCSAG00000001964	ADAR	99	50.000	Chlorocebus_sabaeus
ENSSDUG00000006183	adar	93	46.788	ENSCPBG00000024639	ADAR	100	55.858	Chrysemys_picta_bellii
ENSSDUG00000006183	adar	91	44.088	ENSCANG00000040049	ADAR	81	49.697	Colobus_angolensis_palliatus
ENSSDUG00000006183	adar	73	51.379	ENSCGRG00001013419	Adar	84	51.337	Cricetulus_griseus_chok1gshd
ENSSDUG00000006183	adar	73	51.379	ENSCGRG00000010821	Adar	84	51.337	Cricetulus_griseus_crigri
ENSSDUG00000006183	adar	99	70.317	ENSCSEG00000002318	adar	99	69.503	Cynoglossus_semilaevis
ENSSDUG00000006183	adar	100	72.095	ENSCVAG00000022718	adar	100	71.634	Cyprinodon_variegatus
ENSSDUG00000006183	adar	90	59.195	ENSDARG00000012389	adar	97	56.516	Danio_rerio
ENSSDUG00000006183	adar	91	44.895	ENSDNOG00000008913	ADAR	78	51.266	Dasypus_novemcinctus
ENSSDUG00000006183	adar	67	50.259	ENSDORG00000007813	Adar	99	49.897	Dipodomys_ordii
ENSSDUG00000006183	adar	67	49.500	ENSETEG00000015007	ADAR	81	49.500	Echinops_telfairi
ENSSDUG00000006183	adar	52	46.114	ENSEBUG00000010302	-	63	46.114	Eptatretus_burgeri
ENSSDUG00000006183	adar	67	50.746	ENSEBUG00000005741	-	72	50.580	Eptatretus_burgeri
ENSSDUG00000006183	adar	79	47.425	ENSEASG00005000290	ADAR	81	51.579	Equus_asinus_asinus
ENSSDUG00000006183	adar	79	46.702	ENSECAG00000000974	ADAR	99	50.410	Equus_caballus
ENSSDUG00000006183	adar	53	64.651	ENSEEUG00000014864	ADAR	58	64.651	Erinaceus_europaeus
ENSSDUG00000006183	adar	99	62.737	ENSELUG00000012523	adar	95	74.145	Esox_lucius
ENSSDUG00000006183	adar	67	50.510	ENSFCAG00000001341	ADAR	79	50.561	Felis_catus
ENSSDUG00000006183	adar	79	49.431	ENSFALG00000001232	ADAR	88	53.659	Ficedula_albicollis
ENSSDUG00000006183	adar	67	50.562	ENSFDAG00000016081	ADAR	99	50.565	Fukomys_damarensis
ENSSDUG00000006183	adar	100	72.734	ENSFHEG00000021099	adar	100	71.963	Fundulus_heteroclitus
ENSSDUG00000006183	adar	68	79.468	ENSGMOG00000019052	adar	76	78.723	Gadus_morhua
ENSSDUG00000006183	adar	67	53.542	ENSGALG00000021475	ADAR1	82	53.646	Gallus_gallus
ENSSDUG00000006183	adar	100	73.237	ENSGAFG00000014820	adar	100	72.734	Gambusia_affinis
ENSSDUG00000006183	adar	94	79.263	ENSGACG00000011951	adar	99	78.341	Gasterosteus_aculeatus
ENSSDUG00000006183	adar	93	46.953	ENSGAGG00000009803	ADAR	79	55.337	Gopherus_agassizii
ENSSDUG00000006183	adar	91	43.412	ENSGGOG00000007156	ADAR	97	43.131	Gorilla_gorilla
ENSSDUG00000006183	adar	99	78.042	ENSHBUG00000000091	adar	99	77.754	Haplochromis_burtoni
ENSSDUG00000006183	adar	67	50.255	ENSHGLG00000017910	ADAR	99	49.744	Heterocephalus_glaber_female
ENSSDUG00000006183	adar	67	50.255	ENSHGLG00100010770	ADAR	99	49.744	Heterocephalus_glaber_male
ENSSDUG00000006183	adar	100	69.020	ENSHCOG00000007480	adar	100	68.084	Hippocampus_comes
ENSSDUG00000006183	adar	99	53.480	ENSIPUG00000003263	adar	94	63.861	Ictalurus_punctatus
ENSSDUG00000006183	adar	70	48.630	ENSSTOG00000014151	ADAR	81	49.249	Ictidomys_tridecemlineatus
ENSSDUG00000006183	adar	79	45.675	ENSJJAG00000022056	Adar	85	50.410	Jaculus_jaculus
ENSSDUG00000006183	adar	92	73.011	ENSKMAG00000002086	adar	99	72.465	Kryptolebias_marmoratus
ENSSDUG00000006183	adar	100	76.636	ENSLBEG00000000352	adar	100	76.348	Labrus_bergylta
ENSSDUG00000006183	adar	81	50.599	ENSLACG00000015329	ADAR	86	56.405	Latimeria_chalumnae
ENSSDUG00000006183	adar	80	46.181	ENSLAFG00000017405	ADAR	81	50.360	Loxodonta_africana
ENSSDUG00000006183	adar	91	43.688	ENSMFAG00000003217	ADAR	89	45.972	Macaca_fascicularis
ENSSDUG00000006183	adar	91	43.688	ENSMMUG00000016093	ADAR	89	45.972	Macaca_mulatta
ENSSDUG00000006183	adar	91	43.688	ENSMNEG00000031204	ADAR	89	46.053	Macaca_nemestrina
ENSSDUG00000006183	adar	91	43.774	ENSMLEG00000029344	ADAR	99	49.949	Mandrillus_leucophaeus
ENSSDUG00000006183	adar	99	80.842	ENSMAMG00000014398	adar	99	80.189	Mastacembelus_armatus
ENSSDUG00000006183	adar	99	77.128	ENSMZEG00005015777	adar	99	77.345	Maylandia_zebra
ENSSDUG00000006183	adar	67	52.738	ENSMGAG00000006645	ADAR	92	58.232	Meleagris_gallopavo
ENSSDUG00000006183	adar	67	51.075	ENSMAUG00000015796	Adar	99	50.722	Mesocricetus_auratus
ENSSDUG00000006183	adar	91	43.053	ENSMICG00000001431	ADAR	88	46.046	Microcebus_murinus
ENSSDUG00000006183	adar	52	59.680	ENSMOCG00000018547	Adar	98	59.236	Microtus_ochrogaster
ENSSDUG00000006183	adar	99	78.773	ENSMMOG00000003884	adar	99	78.773	Mola_mola
ENSSDUG00000006183	adar	67	51.633	ENSMODG00000017160	ADAR	79	51.685	Monodelphis_domestica
ENSSDUG00000006183	adar	100	79.827	ENSMALG00000020680	adar	100	79.323	Monopterus_albus
ENSSDUG00000006183	adar	80	47.540	MGP_CAROLIEiJ_G0025215	Adar	92	61.983	Mus_caroli
ENSSDUG00000006183	adar	80	47.364	ENSMUSG00000027951	Adar	92	61.983	Mus_musculus
ENSSDUG00000006183	adar	80	47.007	MGP_PahariEiJ_G0026659	Adar	92	62.046	Mus_pahari
ENSSDUG00000006183	adar	80	47.364	MGP_SPRETEiJ_G0026158	Adar	92	61.983	Mus_spretus
ENSSDUG00000006183	adar	91	43.941	ENSMPUG00000007140	ADAR	76	51.579	Mustela_putorius_furo
ENSSDUG00000006183	adar	79	46.207	ENSMLUG00000017678	ADAR	79	50.256	Myotis_lucifugus
ENSSDUG00000006183	adar	79	46.756	ENSNGAG00000016696	Adar	78	50.634	Nannospalax_galili
ENSSDUG00000006183	adar	99	78.154	ENSNBRG00000004510	adar	99	79.876	Neolamprologus_brichardi
ENSSDUG00000006183	adar	91	43.043	ENSNLEG00000011458	ADAR	80	49.798	Nomascus_leucogenys
ENSSDUG00000006183	adar	57	50.000	ENSMEUG00000012041	-	68	49.643	Notamacropus_eugenii
ENSSDUG00000006183	adar	91	52.918	ENSOPRG00000000313	ADAR	85	52.659	Ochotona_princeps
ENSSDUG00000006183	adar	79	46.101	ENSODEG00000011111	ADAR	79	50.154	Octodon_degus
ENSSDUG00000006183	adar	99	75.250	ENSONIG00000006335	adar	99	74.964	Oreochromis_niloticus
ENSSDUG00000006183	adar	80	46.818	ENSOCUG00000008544	ADAR	85	50.360	Oryctolagus_cuniculus
ENSSDUG00000006183	adar	100	71.624	ENSORLG00000009955	adar	100	71.336	Oryzias_latipes
ENSSDUG00000006183	adar	100	71.552	ENSORLG00020009688	adar	100	71.264	Oryzias_latipes_hni
ENSSDUG00000006183	adar	100	71.480	ENSORLG00015015656	adar	100	71.264	Oryzias_latipes_hsok
ENSSDUG00000006183	adar	100	70.905	ENSOMEG00000008019	adar	100	71.552	Oryzias_melastigma
ENSSDUG00000006183	adar	91	43.482	ENSOGAG00000005587	ADAR	90	45.910	Otolemur_garnettii
ENSSDUG00000006183	adar	79	46.228	ENSOARG00000002952	ADAR	78	48.643	Ovis_aries
ENSSDUG00000006183	adar	67	50.865	ENSPPRG00000001779	ADAR	99	50.562	Panthera_pardus
ENSSDUG00000006183	adar	62	88.889	ENSPTIG00000019964	-	58	47.926	Panthera_tigris_altaica
ENSSDUG00000006183	adar	91	43.260	ENSPTRG00000022833	ADAR	89	46.107	Pan_troglodytes
ENSSDUG00000006183	adar	91	43.326	ENSPANG00000008380	ADAR	89	46.060	Papio_anubis
ENSSDUG00000006183	adar	98	54.752	ENSPKIG00000014435	adar	92	71.636	Paramormyrops_kingsleyae
ENSSDUG00000006183	adar	56	53.808	ENSPSIG00000007571	ADAR	99	54.293	Pelodiscus_sinensis
ENSSDUG00000006183	adar	98	67.083	ENSPMGG00000003925	adar	99	65.662	Periophthalmus_magnuspinnatus
ENSSDUG00000006183	adar	67	50.563	ENSPEMG00000000814	Adar	92	61.881	Peromyscus_maniculatus_bairdii
ENSSDUG00000006183	adar	67	52.599	ENSPCIG00000021738	ADAR	79	52.929	Phascolarctos_cinereus
ENSSDUG00000006183	adar	100	73.185	ENSPFOG00000014636	adar	100	72.466	Poecilia_formosa
ENSSDUG00000006183	adar	100	72.969	ENSPLAG00000022326	adar	100	72.466	Poecilia_latipinna
ENSSDUG00000006183	adar	100	72.714	ENSPMEG00000007882	adar	100	72.466	Poecilia_mexicana
ENSSDUG00000006183	adar	100	72.786	ENSPREG00000017446	adar	100	73.002	Poecilia_reticulata
ENSSDUG00000006183	adar	91	44.147	ENSPPYG00000000776	ADAR	89	46.795	Pongo_abelii
ENSSDUG00000006183	adar	80	53.858	ENSPCAG00000005550	ADAR	71	53.858	Procavia_capensis
ENSSDUG00000006183	adar	92	43.146	ENSPCOG00000017300	ADAR	79	50.821	Propithecus_coquereli
ENSSDUG00000006183	adar	90	66.594	ENSPVAG00000001256	ADAR	70	66.594	Pteropus_vampyrus
ENSSDUG00000006183	adar	99	77.970	ENSPNYG00000004823	adar	99	77.538	Pundamilia_nyererei
ENSSDUG00000006183	adar	98	57.561	ENSPNAG00000027353	adar	98	57.489	Pygocentrus_nattereri
ENSSDUG00000006183	adar	80	46.783	ENSRNOG00000020744	Adar	88	46.026	Rattus_norvegicus
ENSSDUG00000006183	adar	62	48.611	ENSRBIG00000040613	-	63	48.611	Rhinopithecus_bieti
ENSSDUG00000006183	adar	91	43.969	ENSRROG00000033822	ADAR	97	43.011	Rhinopithecus_roxellana
ENSSDUG00000006183	adar	90	43.615	ENSSBOG00000018272	ADAR	89	45.925	Saimiri_boliviensis_boliviensis
ENSSDUG00000006183	adar	68	51.594	ENSSHAG00000014641	ADAR	80	50.988	Sarcophilus_harrisii
ENSSDUG00000006183	adar	96	72.954	ENSSFOG00015021716	adar	90	75.879	Scleropages_formosus
ENSSDUG00000006183	adar	100	82.662	ENSSMAG00000016465	adar	100	82.014	Scophthalmus_maximus
ENSSDUG00000006183	adar	100	98.702	ENSSLDG00000014208	adar	100	98.702	Seriola_lalandi_dorsalis
ENSSDUG00000006183	adar	66	52.183	ENSSPUG00000002795	ADAR	99	53.413	Sphenodon_punctatus
ENSSDUG00000006183	adar	99	77.913	ENSSPAG00000022397	adar	99	77.698	Stegastes_partitus
ENSSDUG00000006183	adar	90	43.895	ENSSSCG00000006543	ADAR	79	52.050	Sus_scrofa
ENSSDUG00000006183	adar	67	53.503	ENSTGUG00000004105	ADAR	90	52.004	Taeniopygia_guttata
ENSSDUG00000006183	adar	99	69.020	ENSTRUG00000008870	adar	99	68.539	Takifugu_rubripes
ENSSDUG00000006183	adar	95	67.451	ENSTNIG00000018320	adar	99	71.612	Tetraodon_nigroviridis
ENSSDUG00000006183	adar	80	45.833	ENSTBEG00000013312	ADAR	86	45.447	Tupaia_belangeri
ENSSDUG00000006183	adar	52	56.614	ENSTTRG00000014001	ADAR	57	56.101	Tursiops_truncatus
ENSSDUG00000006183	adar	79	48.419	ENSUAMG00000014332	ADAR	78	52.270	Ursus_americanus
ENSSDUG00000006183	adar	79	46.147	ENSUMAG00000019958	ADAR	78	49.536	Ursus_maritimus
ENSSDUG00000006183	adar	91	43.428	ENSVVUG00000001831	ADAR	90	55.959	Vulpes_vulpes
ENSSDUG00000006183	adar	100	73.257	ENSXCOG00000009420	adar	99	77.583	Xiphophorus_couchianus
ENSSDUG00000006183	adar	100	73.257	ENSXMAG00000010557	adar	100	72.610	Xiphophorus_maculatus