EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000006191 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 5673 bases
Position: chrBDQW01002425.1:82680-88352
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000008454	RVT_1	PF00078.27	4.7e-40	1	1
ENSSDUP00000008454	Exo_endo_phos	PF03372.23	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000008603	-	5673	-	ENSSDUP00000008454	1306 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000006191's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000006191's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000006191	-	99	50.460	ENSATEG00000021554	-	98	50.153	Anabas_testudineus
ENSSDUG00000006191	-	80	41.452	ENSAMXG00000037575	-	97	41.452	Astyanax_mexicanus
ENSSDUG00000006191	-	99	39.623	ENSDARG00000100303	CU638714.1	99	39.547	Danio_rerio
ENSSDUG00000006191	-	98	50.692	ENSDARG00000105157	BX649434.3	98	50.692	Danio_rerio
ENSSDUG00000006191	-	98	47.873	ENSDARG00000098779	BX547930.4	99	47.517	Danio_rerio
ENSSDUG00000006191	-	99	50.952	ENSDARG00000101795	CABZ01033394.1	99	50.952	Danio_rerio
ENSSDUG00000006191	-	96	49.173	ENSGMOG00000001470	-	98	49.330	Gadus_morhua
ENSSDUG00000006191	-	99	50.796	ENSGACG00000000122	-	99	50.836	Gasterosteus_aculeatus
ENSSDUG00000006191	-	67	53.364	ENSKMAG00000017599	-	99	53.364	Kryptolebias_marmoratus
ENSSDUG00000006191	-	58	44.141	ENSLBEG00000022930	-	93	44.141	Labrus_bergylta
ENSSDUG00000006191	-	78	42.968	ENSLBEG00000008569	-	99	42.968	Labrus_bergylta
ENSSDUG00000006191	-	99	40.693	ENSLBEG00000007872	-	99	40.510	Labrus_bergylta
ENSSDUG00000006191	-	75	52.227	ENSLBEG00000008622	-	99	51.923	Labrus_bergylta
ENSSDUG00000006191	-	99	40.919	ENSLBEG00000007968	-	99	40.735	Labrus_bergylta
ENSSDUG00000006191	-	86	51.881	ENSLBEG00000029018	-	99	51.619	Labrus_bergylta
ENSSDUG00000006191	-	99	40.919	ENSLBEG00000008483	-	99	40.735	Labrus_bergylta
ENSSDUG00000006191	-	99	40.919	ENSLBEG00000012182	-	99	40.735	Labrus_bergylta
ENSSDUG00000006191	-	98	40.185	ENSORLG00000024845	-	98	39.878	Oryzias_latipes
ENSSDUG00000006191	-	84	48.195	ENSORLG00000024114	-	99	48.105	Oryzias_latipes
ENSSDUG00000006191	-	98	40.262	ENSORLG00020022348	-	98	39.954	Oryzias_latipes_hni
ENSSDUG00000006191	-	99	38.688	ENSOMEG00000013951	-	99	38.462	Oryzias_melastigma
ENSSDUG00000006191	-	97	49.922	ENSXMAG00000028372	-	99	49.766	Xiphophorus_maculatus
ENSSDUG00000006191	-	98	48.034	ENSXMAG00000028545	-	100	48.034	Xiphophorus_maculatus
ENSSDUG00000006191	-	100	47.237	ENSXMAG00000024932	-	99	47.237	Xiphophorus_maculatus
ENSSDUG00000006191	-	100	47.237	ENSXMAG00000025449	-	99	47.237	Xiphophorus_maculatus