EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000006287 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 1007 bases
Position: chrBDQW01000113.1:103772-104778
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000008564	PARP	PF00644.20	8.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000008723	-	510	-	ENSSDUP00000008564	169 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000006287's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000006287's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000006287	-	80	51.095	ENSSDUG00000018069	gig2p	62	51.095
ENSSDUG00000006287	-	90	48.052	ENSSDUG00000018079	-	88	48.052
ENSSDUG00000006287	-	92	70.513	ENSSDUG00000012574	-	93	70.513

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000006287	-	91	67.974	ENSAPOG00000010161	-	91	67.974	Acanthochromis_polyacanthus
ENSSDUG00000006287	-	91	66.013	ENSACIG00000018444	-	91	66.013	Amphilophus_citrinellus
ENSSDUG00000006287	-	78	67.939	ENSAOCG00000010913	-	86	67.939	Amphiprion_ocellaris
ENSSDUG00000006287	-	78	67.939	ENSAOCG00000022001	-	86	67.939	Amphiprion_ocellaris
ENSSDUG00000006287	-	91	66.883	ENSAOCG00000022027	-	93	66.883	Amphiprion_ocellaris
ENSSDUG00000006287	-	78	67.939	ENSAPEG00000005732	-	86	67.939	Amphiprion_percula
ENSSDUG00000006287	-	91	65.584	ENSAPEG00000005707	-	95	65.584	Amphiprion_percula
ENSSDUG00000006287	-	86	65.517	ENSAPEG00000005698	-	81	65.517	Amphiprion_percula
ENSSDUG00000006287	-	88	75.839	ENSATEG00000019359	-	89	75.839	Anabas_testudineus
ENSSDUG00000006287	-	74	71.200	ENSACLG00000019059	-	88	71.200	Astatotilapia_calliptera
ENSSDUG00000006287	-	85	69.444	ENSCVAG00000003747	-	95	69.444	Cyprinodon_variegatus
ENSSDUG00000006287	-	93	70.064	ENSCVAG00000014970	-	92	70.064	Cyprinodon_variegatus
ENSSDUG00000006287	-	78	69.466	ENSCVAG00000003727	-	79	69.466	Cyprinodon_variegatus
ENSSDUG00000006287	-	78	56.818	ENSELUG00000017332	-	86	56.818	Esox_lucius
ENSSDUG00000006287	-	91	67.532	ENSFHEG00000017157	-	90	67.532	Fundulus_heteroclitus
ENSSDUG00000006287	-	92	64.744	ENSFHEG00000017170	-	90	64.744	Fundulus_heteroclitus
ENSSDUG00000006287	-	77	65.385	ENSFHEG00000017166	-	75	65.385	Fundulus_heteroclitus
ENSSDUG00000006287	-	73	68.254	ENSGMOG00000020583	-	100	68.254	Gadus_morhua
ENSSDUG00000006287	-	77	60.769	ENSGMOG00000020613	-	100	60.769	Gadus_morhua
ENSSDUG00000006287	-	89	64.474	ENSGMOG00000019928	-	99	64.474	Gadus_morhua
ENSSDUG00000006287	-	89	66.667	ENSGMOG00000013817	-	99	66.667	Gadus_morhua
ENSSDUG00000006287	-	85	65.734	ENSGMOG00000020321	-	99	65.734	Gadus_morhua
ENSSDUG00000006287	-	89	63.333	ENSGMOG00000019914	-	99	63.333	Gadus_morhua
ENSSDUG00000006287	-	85	63.194	ENSGMOG00000020063	-	100	63.194	Gadus_morhua
ENSSDUG00000006287	-	74	65.354	ENSGMOG00000020414	-	99	65.354	Gadus_morhua
ENSSDUG00000006287	-	75	65.079	ENSGAFG00000004666	-	100	65.079	Gambusia_affinis
ENSSDUG00000006287	-	93	65.432	ENSGAFG00000005347	-	97	65.432	Gambusia_affinis
ENSSDUG00000006287	-	90	70.779	ENSGACG00000014936	-	100	70.779	Gasterosteus_aculeatus
ENSSDUG00000006287	-	90	66.447	ENSHBUG00000018905	-	91	66.447	Haplochromis_burtoni
ENSSDUG00000006287	-	91	64.052	ENSHCOG00000006694	-	93	64.052	Hippocampus_comes
ENSSDUG00000006287	-	90	65.132	ENSKMAG00000004246	-	91	65.132	Kryptolebias_marmoratus
ENSSDUG00000006287	-	75	60.156	ENSLBEG00000007229	-	50	60.156	Labrus_bergylta
ENSSDUG00000006287	-	79	66.917	ENSLBEG00000007220	-	74	66.917	Labrus_bergylta
ENSSDUG00000006287	-	88	73.649	ENSLBEG00000010100	-	94	73.649	Labrus_bergylta
ENSSDUG00000006287	-	73	75.610	ENSLBEG00000007243	-	92	75.610	Labrus_bergylta
ENSSDUG00000006287	-	90	72.368	ENSLBEG00000010046	-	96	72.368	Labrus_bergylta
ENSSDUG00000006287	-	91	67.974	ENSLBEG00000010115	-	91	67.974	Labrus_bergylta
ENSSDUG00000006287	-	78	59.542	ENSLBEG00000007190	-	87	60.305	Labrus_bergylta
ENSSDUG00000006287	-	92	68.590	ENSMAMG00000019358	-	93	68.590	Mastacembelus_armatus
ENSSDUG00000006287	-	91	67.320	ENSMZEG00005002350	-	91	67.320	Maylandia_zebra
ENSSDUG00000006287	-	96	64.815	ENSMZEG00005002337	-	99	64.815	Maylandia_zebra
ENSSDUG00000006287	-	91	68.182	ENSMMOG00000020154	-	93	68.182	Mola_mola
ENSSDUG00000006287	-	89	68.874	ENSMMOG00000020156	-	94	68.874	Mola_mola
ENSSDUG00000006287	-	88	68.243	ENSMMOG00000020157	-	95	68.243	Mola_mola
ENSSDUG00000006287	-	73	62.097	ENSMALG00000014591	-	72	62.097	Monopterus_albus
ENSSDUG00000006287	-	75	74.016	ENSMALG00000021097	-	100	74.016	Monopterus_albus
ENSSDUG00000006287	-	91	63.399	ENSNBRG00000009099	-	88	63.399	Neolamprologus_brichardi
ENSSDUG00000006287	-	91	66.013	ENSNBRG00000009079	-	90	66.013	Neolamprologus_brichardi
ENSSDUG00000006287	-	91	65.584	ENSONIG00000021378	-	98	65.584	Oreochromis_niloticus
ENSSDUG00000006287	-	91	66.667	ENSONIG00000009459	-	91	66.234	Oreochromis_niloticus
ENSSDUG00000006287	-	86	64.384	ENSORLG00000001055	-	87	64.384	Oryzias_latipes
ENSSDUG00000006287	-	91	63.636	ENSORLG00020017394	-	52	63.636	Oryzias_latipes_hni
ENSSDUG00000006287	-	92	60.256	ENSOMEG00000015296	-	66	60.256	Oryzias_melastigma
ENSSDUG00000006287	-	91	64.706	ENSOMEG00000015284	-	92	64.706	Oryzias_melastigma
ENSSDUG00000006287	-	91	67.320	ENSPMGG00000017877	-	89	67.320	Periophthalmus_magnuspinnatus
ENSSDUG00000006287	-	91	66.667	ENSPMGG00000017878	-	94	66.667	Periophthalmus_magnuspinnatus
ENSSDUG00000006287	-	89	64.901	ENSPFOG00000020434	-	100	64.901	Poecilia_formosa
ENSSDUG00000006287	-	89	64.238	ENSPLAG00000014302	-	92	64.238	Poecilia_latipinna
ENSSDUG00000006287	-	90	66.447	ENSPLAG00000020837	-	91	66.447	Poecilia_latipinna
ENSSDUG00000006287	-	100	60.000	ENSPMEG00000011183	-	84	60.000	Poecilia_mexicana
ENSSDUG00000006287	-	90	64.474	ENSPREG00000013691	-	95	64.474	Poecilia_reticulata
ENSSDUG00000006287	-	85	72.028	ENSSMAG00000014710	-	98	68.072	Scophthalmus_maximus
ENSSDUG00000006287	-	79	66.917	ENSSMAG00000014637	-	90	66.917	Scophthalmus_maximus
ENSSDUG00000006287	-	92	67.949	ENSSMAG00000014601	-	92	67.949	Scophthalmus_maximus
ENSSDUG00000006287	-	92	96.129	ENSSLDG00000012388	-	91	96.129	Seriola_lalandi_dorsalis
ENSSDUG00000006287	-	89	71.523	ENSSLDG00000013905	-	89	71.523	Seriola_lalandi_dorsalis
ENSSDUG00000006287	-	91	67.532	ENSSPAG00000005387	-	84	67.532	Stegastes_partitus
ENSSDUG00000006287	-	87	70.068	ENSSPAG00000005395	-	94	70.068	Stegastes_partitus
ENSSDUG00000006287	-	86	68.966	ENSTRUG00000020594	-	87	68.966	Takifugu_rubripes
ENSSDUG00000006287	-	87	66.667	ENSTRUG00000024239	-	99	66.667	Takifugu_rubripes
ENSSDUG00000006287	-	90	66.447	ENSTRUG00000023048	-	100	66.447	Takifugu_rubripes
ENSSDUG00000006287	-	75	69.291	ENSTRUG00000025007	-	79	69.291	Takifugu_rubripes
ENSSDUG00000006287	-	78	70.229	ENSXCOG00000018144	-	88	70.229	Xiphophorus_couchianus
ENSSDUG00000006287	-	89	65.132	ENSXCOG00000000142	-	91	65.132	Xiphophorus_couchianus
ENSSDUG00000006287	-	88	63.514	ENSXMAG00000023121	-	95	63.514	Xiphophorus_maculatus
ENSSDUG00000006287	-	90	67.105	ENSXMAG00000019489	-	93	67.105	Xiphophorus_maculatus