EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000006298 (Gene tree)
Gene ID: 111222630
Gene Symbol: -
Alias: -
Full Name: mex-3 RNA binding family member A
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 5358 bases
Position: chrBDQW01000104.1:480176-485533
Accession: 111222630
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000008572	KH_1	PF00013.29	2.3e-25	1	2
ENSSDUP00000008572	KH_1	PF00013.29	2.3e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000008731	-	2130	XM_022746425	ENSSDUP00000008572	628 (aa)	XP_022602146	-

Gene Model

Click here to download ENSSDUG00000006298's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000006298's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000006298	-	84	47.458	ENSSDUG00000015559	MEX3D	86	51.762

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000006298	-	84	99.241	ENSAPOG00000008262	-	100	99.241	Acanthochromis_polyacanthus
ENSSDUG00000006298	-	84	98.476	ENSACIG00000017394	-	97	98.476	Amphilophus_citrinellus
ENSSDUG00000006298	-	84	99.241	ENSAOCG00000015646	-	100	99.241	Amphiprion_ocellaris
ENSSDUG00000006298	-	84	99.241	ENSAPEG00000022160	-	100	99.241	Amphiprion_percula
ENSSDUG00000006298	-	84	99.241	ENSATEG00000006186	-	100	99.241	Anabas_testudineus
ENSSDUG00000006298	-	100	94.913	ENSACLG00000010278	-	100	94.754	Astatotilapia_calliptera
ENSSDUG00000006298	-	84	81.250	ENSAMXG00000024633	-	100	81.474	Astyanax_mexicanus
ENSSDUG00000006298	-	84	90.095	ENSCSEG00000012003	-	100	89.905	Cynoglossus_semilaevis
ENSSDUG00000006298	-	84	90.909	ENSCVAG00000020021	-	100	89.773	Cyprinodon_variegatus
ENSSDUG00000006298	-	84	83.835	ENSDARG00000076638	FO082781.1	100	82.895	Danio_rerio
ENSSDUG00000006298	-	84	91.825	ENSELUG00000012012	-	100	90.684	Esox_lucius
ENSSDUG00000006298	-	84	94.307	ENSFHEG00000003026	-	100	93.359	Fundulus_heteroclitus
ENSSDUG00000006298	-	56	87.097	ENSGMOG00000006456	-	70	80.556	Gadus_morhua
ENSSDUG00000006298	-	84	94.886	ENSGAFG00000021726	-	100	94.129	Gambusia_affinis
ENSSDUG00000006298	-	84	83.002	ENSGACG00000013282	-	100	81.475	Gasterosteus_aculeatus
ENSSDUG00000006298	-	100	94.913	ENSHBUG00000009342	-	100	94.754	Haplochromis_burtoni
ENSSDUG00000006298	-	82	77.675	ENSHCOG00000007164	-	100	77.491	Hippocampus_comes
ENSSDUG00000006298	-	85	77.132	ENSIPUG00000006083	mex3a	98	77.677	Ictalurus_punctatus
ENSSDUG00000006298	-	86	90.942	ENSKMAG00000015538	-	96	91.123	Kryptolebias_marmoratus
ENSSDUG00000006298	-	84	97.714	ENSLBEG00000016402	-	100	97.714	Labrus_bergylta
ENSSDUG00000006298	-	84	77.861	ENSLOCG00000008857	-	100	77.674	Lepisosteus_oculatus
ENSSDUG00000006298	-	84	99.048	ENSMAMG00000010269	-	100	99.048	Mastacembelus_armatus
ENSSDUG00000006298	-	84	97.905	ENSMZEG00005017507	-	100	97.905	Maylandia_zebra
ENSSDUG00000006298	-	81	95.108	ENSMMOG00000017114	-	90	95.108	Mola_mola
ENSSDUG00000006298	-	88	98.367	ENSMALG00000004078	-	98	98.367	Monopterus_albus
ENSSDUG00000006298	-	84	98.286	ENSNBRG00000005141	-	100	98.286	Neolamprologus_brichardi
ENSSDUG00000006298	-	84	90.095	ENSONIG00000002279	-	100	89.205	Oreochromis_niloticus
ENSSDUG00000006298	-	85	91.061	ENSORLG00000024166	-	99	88.174	Oryzias_latipes
ENSSDUG00000006298	-	85	91.434	ENSORLG00020013757	-	99	88.522	Oryzias_latipes_hni
ENSSDUG00000006298	-	85	91.061	ENSORLG00015019602	-	99	88.174	Oryzias_latipes_hsok
ENSSDUG00000006298	-	84	91.667	ENSOMEG00000020254	-	100	91.667	Oryzias_melastigma
ENSSDUG00000006298	-	84	82.765	ENSPKIG00000009869	-	97	82.514	Paramormyrops_kingsleyae
ENSSDUG00000006298	-	84	81.096	ENSPKIG00000020911	-	100	82.042	Paramormyrops_kingsleyae
ENSSDUG00000006298	-	84	78.293	ENSPMGG00000004206	-	100	78.293	Periophthalmus_magnuspinnatus
ENSSDUG00000006298	-	84	94.528	ENSPFOG00000011366	-	100	93.774	Poecilia_formosa
ENSSDUG00000006298	-	84	94.707	ENSPLAG00000007972	-	100	93.951	Poecilia_latipinna
ENSSDUG00000006298	-	84	94.518	ENSPMEG00000001392	-	100	93.762	Poecilia_mexicana
ENSSDUG00000006298	-	84	94.528	ENSPREG00000017309	-	100	93.962	Poecilia_reticulata
ENSSDUG00000006298	-	84	98.286	ENSPNYG00000018270	-	100	98.286	Pundamilia_nyererei
ENSSDUG00000006298	-	84	80.292	ENSPNAG00000004505	-	100	80.657	Pygocentrus_nattereri
ENSSDUG00000006298	-	60	94.737	ENSSFOG00015008589	-	93	63.781	Scleropages_formosus
ENSSDUG00000006298	-	84	79.924	ENSSFOG00015024157	-	100	80.303	Scleropages_formosus
ENSSDUG00000006298	-	84	96.198	ENSSMAG00000016216	-	100	96.198	Scophthalmus_maximus
ENSSDUG00000006298	-	100	99.841	ENSSLDG00000012129	-	100	99.841	Seriola_lalandi_dorsalis
ENSSDUG00000006298	-	84	98.667	ENSSPAG00000012030	-	100	98.667	Stegastes_partitus
ENSSDUG00000006298	-	84	94.286	ENSTRUG00000007796	-	100	94.286	Takifugu_rubripes
ENSSDUG00000006298	-	61	93.247	ENSTNIG00000004473	-	97	93.247	Tetraodon_nigroviridis
ENSSDUG00000006298	-	61	87.411	ENSXCOG00000004225	-	89	87.411	Xiphophorus_couchianus
ENSSDUG00000006298	-	84	94.886	ENSXMAG00000013412	-	100	94.129	Xiphophorus_maculatus