EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000006422 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: 7SK snRNA methylphosphate capping enzyme-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 3105 bases
Position: chrBDQW01010526.1:30902-34006
Accession: 111240082
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000008748	MTS	PF05175.14	2.2e-06	1	1
ENSSDUP00000008748	Bin3	PF06859.12	7.7e-30	1	1
ENSSDUP00000008748	Methyltransf_31	PF13847.6	8.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000008917	-	1602	XM_022770059	ENSSDUP00000008748	533 (aa)	XP_022625780	-

Gene Model

Click here to download ENSSDUG00000006422's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000006422's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000006422	-	83	39.962	ENSG00000146834	MEPCE	88	39.175	Homo_sapiens
ENSSDUG00000006422	-	82	63.838	ENSAPOG00000009313	-	100	61.039	Acanthochromis_polyacanthus
ENSSDUG00000006422	-	50	63.240	ENSAPOG00000010701	-	94	62.733	Acanthochromis_polyacanthus
ENSSDUG00000006422	-	83	40.111	ENSAMEG00000015035	MEPCE	83	39.852	Ailuropoda_melanoleuca
ENSSDUG00000006422	-	83	42.363	ENSACIG00000012358	mepce	81	40.443	Amphilophus_citrinellus
ENSSDUG00000006422	-	85	65.295	ENSAOCG00000018539	si:ch1073-157b13.1	99	64.222	Amphiprion_ocellaris
ENSSDUG00000006422	-	85	68.809	ENSAOCG00000018483	-	99	64.222	Amphiprion_ocellaris
ENSSDUG00000006422	-	92	64.696	ENSAPEG00000021439	-	97	64.334	Amphiprion_percula
ENSSDUG00000006422	-	86	78.814	ENSATEG00000018752	si:ch1073-157b13.1	83	81.250	Anabas_testudineus
ENSSDUG00000006422	-	86	77.119	ENSATEG00000001673	-	83	79.464	Anabas_testudineus
ENSSDUG00000006422	-	84	37.240	ENSACAG00000011551	MEPCE	79	36.981	Anolis_carolinensis
ENSSDUG00000006422	-	83	39.662	ENSANAG00000035127	MEPCE	76	39.212	Aotus_nancymaae
ENSSDUG00000006422	-	91	61.601	ENSACLG00000021966	-	96	61.881	Astatotilapia_calliptera
ENSSDUG00000006422	-	77	59.649	ENSAMXG00000033849	si:ch1073-157b13.1	71	59.649	Astyanax_mexicanus
ENSSDUG00000006422	-	80	39.139	ENSBTAG00000016763	MEPCE	75	39.098	Bos_taurus
ENSSDUG00000006422	-	83	39.662	ENSCJAG00000015348	MEPCE	76	39.212	Callithrix_jacchus
ENSSDUG00000006422	-	83	40.149	ENSCAFG00000014458	MEPCE	75	39.889	Canis_familiaris
ENSSDUG00000006422	-	83	40.149	ENSCAFG00020014018	MEPCE	75	39.889	Canis_lupus_dingo
ENSSDUG00000006422	-	80	39.139	ENSCHIG00000008713	MEPCE	77	38.910	Capra_hircus
ENSSDUG00000006422	-	83	39.811	ENSCPOG00000015225	MEPCE	76	40.866	Cavia_porcellus
ENSSDUG00000006422	-	83	39.662	ENSCCAG00000028766	MEPCE	76	39.212	Cebus_capucinus
ENSSDUG00000006422	-	83	40.000	ENSCLAG00000003470	MEPCE	79	41.055	Chinchilla_lanigera
ENSSDUG00000006422	-	83	39.587	ENSCSAG00000017894	MEPCE	75	38.662	Chlorocebus_sabaeus
ENSSDUG00000006422	-	83	39.587	ENSCANG00000030898	MEPCE	88	40.206	Colobus_angolensis_palliatus
ENSSDUG00000006422	-	83	39.292	ENSCGRG00001008844	Mepce	78	38.817	Cricetulus_griseus_chok1gshd
ENSSDUG00000006422	-	91	57.661	ENSCSEG00000005838	-	96	58.236	Cynoglossus_semilaevis
ENSSDUG00000006422	-	91	61.429	ENSCVAG00000001392	si:ch1073-157b13.1	96	61.302	Cyprinodon_variegatus
ENSSDUG00000006422	-	84	40.734	ENSDARG00000035771	MEPCE	84	40.917	Danio_rerio
ENSSDUG00000006422	-	83	38.619	ENSDORG00000005311	Mepce	91	55.172	Dipodomys_ordii
ENSSDUG00000006422	-	83	40.602	ENSETEG00000001440	-	87	41.165	Echinops_telfairi
ENSSDUG00000006422	-	60	36.275	ENSEBUG00000003854	-	56	36.275	Eptatretus_burgeri
ENSSDUG00000006422	-	83	39.474	ENSEASG00005017074	MEPCE	75	40.525	Equus_asinus_asinus
ENSSDUG00000006422	-	83	39.474	ENSECAG00000024124	MEPCE	75	40.525	Equus_caballus
ENSSDUG00000006422	-	83	41.011	ENSFCAG00000010803	MEPCE	75	40.748	Felis_catus
ENSSDUG00000006422	-	83	39.252	ENSFDAG00000001651	MEPCE	92	40.299	Fukomys_damarensis
ENSSDUG00000006422	-	88	41.129	ENSGALG00000048263	MEPCE	54	68.478	Gallus_gallus
ENSSDUG00000006422	-	90	58.453	ENSGAFG00000020426	si:ch1073-157b13.1	99	59.369	Gambusia_affinis
ENSSDUG00000006422	-	52	62.928	ENSGACG00000001158	-	84	65.836	Gasterosteus_aculeatus
ENSSDUG00000006422	-	83	42.032	ENSGAGG00000016614	MEPCE	84	42.629	Gopherus_agassizii
ENSSDUG00000006422	-	83	39.626	ENSGGOG00000005371	MEPCE	88	39.175	Gorilla_gorilla
ENSSDUG00000006422	-	83	39.319	ENSHGLG00000011263	MEPCE	78	40.377	Heterocephalus_glaber_female
ENSSDUG00000006422	-	90	37.627	ENSHGLG00100016274	MEPCE	96	38.475	Heterocephalus_glaber_male
ENSSDUG00000006422	-	90	64.213	ENSHCOG00000009246	-	95	62.012	Hippocampus_comes
ENSSDUG00000006422	-	84	39.960	ENSHCOG00000001737	mepce	78	40.159	Hippocampus_comes
ENSSDUG00000006422	-	61	64.103	ENSIPUG00000021852	mepce	85	42.640	Ictalurus_punctatus
ENSSDUG00000006422	-	90	43.525	ENSIPUG00000003387	si:ch1073-157b13.1	83	41.906	Ictalurus_punctatus
ENSSDUG00000006422	-	83	39.439	ENSSTOG00000007568	MEPCE	76	39.518	Ictidomys_tridecemlineatus
ENSSDUG00000006422	-	91	60.751	ENSKMAG00000007072	-	96	60.590	Kryptolebias_marmoratus
ENSSDUG00000006422	-	68	63.934	ENSLACG00000012355	MEPCE	85	43.290	Latimeria_chalumnae
ENSSDUG00000006422	-	83	40.187	ENSLAFG00000012347	MEPCE	78	39.925	Loxodonta_africana
ENSSDUG00000006422	-	83	39.626	ENSMFAG00000003007	MEPCE	76	39.139	Macaca_fascicularis
ENSSDUG00000006422	-	83	39.626	ENSMMUG00000012724	MEPCE	76	39.139	Macaca_mulatta
ENSSDUG00000006422	-	83	39.626	ENSMNEG00000038460	MEPCE	76	39.139	Macaca_nemestrina
ENSSDUG00000006422	-	81	39.341	ENSMLEG00000043318	MEPCE	88	39.175	Mandrillus_leucophaeus
ENSSDUG00000006422	-	89	88.136	ENSMAMG00000011139	si:ch1073-157b13.1	80	89.286	Mastacembelus_armatus
ENSSDUG00000006422	-	60	61.832	ENSMAMG00000017139	mepce	87	40.000	Mastacembelus_armatus
ENSSDUG00000006422	-	91	61.765	ENSMZEG00005022148	-	96	62.046	Maylandia_zebra
ENSSDUG00000006422	-	83	40.112	ENSMAUG00000001456	Mepce	78	39.739	Mesocricetus_auratus
ENSSDUG00000006422	-	83	39.033	ENSMICG00000030166	MEPCE	75	38.776	Microcebus_murinus
ENSSDUG00000006422	-	83	39.700	ENSMOCG00000015013	Mepce	78	39.400	Microtus_ochrogaster
ENSSDUG00000006422	-	61	63.025	ENSMMOG00000016706	mepce	59	61.345	Mola_mola
ENSSDUG00000006422	-	86	62.095	ENSMMOG00000011072	-	88	64.683	Mola_mola
ENSSDUG00000006422	-	83	40.901	ENSMODG00000004457	MEPCE	76	39.775	Monodelphis_domestica
ENSSDUG00000006422	-	91	62.420	ENSMALG00000004684	si:ch1073-157b13.1	97	60.995	Monopterus_albus
ENSSDUG00000006422	-	83	40.748	MGP_CAROLIEiJ_G0027892	Mepce	91	55.172	Mus_caroli
ENSSDUG00000006422	-	83	40.672	ENSMUSG00000029726	Mepce	91	55.172	Mus_musculus
ENSSDUG00000006422	-	83	40.824	MGP_SPRETEiJ_G0028897	Mepce	91	55.172	Mus_spretus
ENSSDUG00000006422	-	83	40.631	ENSMPUG00000015673	MEPCE	75	40.370	Mustela_putorius_furo
ENSSDUG00000006422	-	83	40.678	ENSMLUG00000009678	MEPCE	75	40.414	Myotis_lucifugus
ENSSDUG00000006422	-	83	40.113	ENSNGAG00000007098	Mepce	79	40.789	Nannospalax_galili
ENSSDUG00000006422	-	92	66.493	ENSNBRG00000006332	-	95	65.419	Neolamprologus_brichardi
ENSSDUG00000006422	-	52	33.426	ENSNLEG00000011734	MEPCE	65	31.850	Nomascus_leucogenys
ENSSDUG00000006422	-	65	39.120	ENSMEUG00000001370	MEPCE	72	37.731	Notamacropus_eugenii
ENSSDUG00000006422	-	87	38.146	ENSOPRG00000014811	MEPCE	77	39.925	Ochotona_princeps
ENSSDUG00000006422	-	83	39.698	ENSODEG00000016662	MEPCE	78	41.509	Octodon_degus
ENSSDUG00000006422	-	80	40.891	ENSONIG00000005231	mepce	50	43.678	Oreochromis_niloticus
ENSSDUG00000006422	-	84	71.150	ENSONIG00000009135	-	92	68.738	Oreochromis_niloticus
ENSSDUG00000006422	-	80	39.808	ENSOCUG00000029324	MEPCE	78	39.775	Oryctolagus_cuniculus
ENSSDUG00000006422	-	56	62.609	ENSORLG00020005817	mepce	50	55.474	Oryzias_latipes_hni
ENSSDUG00000006422	-	56	62.609	ENSORLG00015011129	mepce	50	55.474	Oryzias_latipes_hsok
ENSSDUG00000006422	-	91	60.702	ENSOMEG00000007393	si:ch1073-157b13.1	96	60.247	Oryzias_melastigma
ENSSDUG00000006422	-	83	39.700	ENSOGAG00000034770	MEPCE	76	41.055	Otolemur_garnettii
ENSSDUG00000006422	-	80	39.139	ENSOARG00000016948	MEPCE	78	38.910	Ovis_aries
ENSSDUG00000006422	-	83	39.587	ENSPPAG00000031579	MEPCE	75	39.139	Pan_paniscus
ENSSDUG00000006422	-	83	41.011	ENSPPRG00000002350	MEPCE	88	42.784	Panthera_pardus
ENSSDUG00000006422	-	83	39.626	ENSPTRG00000019487	MEPCE	76	39.139	Pan_troglodytes
ENSSDUG00000006422	-	83	39.626	ENSPTRG00000050679	-	76	39.139	Pan_troglodytes
ENSSDUG00000006422	-	83	39.626	ENSPANG00000022874	MEPCE	76	39.139	Papio_anubis
ENSSDUG00000006422	-	84	40.203	ENSPKIG00000021740	MEPCE	82	39.358	Paramormyrops_kingsleyae
ENSSDUG00000006422	-	88	50.435	ENSPKIG00000006607	mepce	67	55.000	Paramormyrops_kingsleyae
ENSSDUG00000006422	-	83	40.936	ENSPSIG00000007183	MEPCE	84	39.571	Pelodiscus_sinensis
ENSSDUG00000006422	-	63	62.595	ENSPMGG00000008592	mepce	59	60.833	Periophthalmus_magnuspinnatus
ENSSDUG00000006422	-	59	49.322	ENSPMGG00000021503	-	82	50.847	Periophthalmus_magnuspinnatus
ENSSDUG00000006422	-	83	41.276	ENSPEMG00000003157	Mepce	78	39.405	Peromyscus_maniculatus_bairdii
ENSSDUG00000006422	-	83	41.165	ENSPCIG00000012285	MEPCE	76	40.038	Phascolarctos_cinereus
ENSSDUG00000006422	-	85	63.599	ENSPFOG00000016062	si:ch1073-157b13.1	89	63.485	Poecilia_formosa
ENSSDUG00000006422	-	80	39.692	ENSPFOG00000019428	mepce	50	41.091	Poecilia_formosa
ENSSDUG00000006422	-	91	59.415	ENSPLAG00000017448	si:ch1073-157b13.1	96	59.630	Poecilia_latipinna
ENSSDUG00000006422	-	91	59.307	ENSPMEG00000003971	si:ch1073-157b13.1	96	58.595	Poecilia_mexicana
ENSSDUG00000006422	-	83	42.574	ENSPMEG00000013697	mepce	89	38.657	Poecilia_mexicana
ENSSDUG00000006422	-	83	58.774	ENSPREG00000012073	-	90	57.917	Poecilia_reticulata
ENSSDUG00000006422	-	83	39.813	ENSPPYG00000017411	MEPCE	75	39.326	Pongo_abelii
ENSSDUG00000006422	-	83	39.106	ENSPCOG00000020884	MEPCE	76	39.024	Propithecus_coquereli
ENSSDUG00000006422	-	83	41.276	ENSPVAG00000011996	MEPCE	76	40.150	Pteropus_vampyrus
ENSSDUG00000006422	-	92	68.343	ENSPNYG00000001274	-	94	68.750	Pundamilia_nyererei
ENSSDUG00000006422	-	95	37.293	ENSPNAG00000013102	si:ch1073-157b13.1	62	57.895	Pygocentrus_nattereri
ENSSDUG00000006422	-	83	41.055	ENSRNOG00000045911	Mepce	78	38.920	Rattus_norvegicus
ENSSDUG00000006422	-	83	41.055	ENSRNOG00000001387	LOC100910540	78	38.920	Rattus_norvegicus
ENSSDUG00000006422	-	83	39.513	ENSRBIG00000027050	MEPCE	76	39.065	Rhinopithecus_bieti
ENSSDUG00000006422	-	61	39.646	ENSRBIG00000032270	-	69	38.677	Rhinopithecus_bieti
ENSSDUG00000006422	-	83	39.332	ENSRROG00000031225	MEPCE	76	39.139	Rhinopithecus_roxellana
ENSSDUG00000006422	-	83	39.474	ENSSBOG00000011382	MEPCE	88	38.660	Saimiri_boliviensis_boliviensis
ENSSDUG00000006422	-	92	62.036	ENSSMAG00000004830	-	97	62.114	Scophthalmus_maximus
ENSSDUG00000006422	-	84	73.002	ENSSLDG00000019673	-	99	72.775	Seriola_lalandi_dorsalis
ENSSDUG00000006422	-	77	41.317	ENSSPUG00000004856	MEPCE	68	38.889	Sphenodon_punctatus
ENSSDUG00000006422	-	92	65.825	ENSSPAG00000008313	-	97	64.906	Stegastes_partitus
ENSSDUG00000006422	-	83	38.692	ENSSSCG00000023680	MEPCE	75	38.619	Sus_scrofa
ENSSDUG00000006422	-	92	59.241	ENSTRUG00000001890	-	97	57.000	Takifugu_rubripes
ENSSDUG00000006422	-	61	66.116	ENSTNIG00000010046	mepce	74	63.063	Tetraodon_nigroviridis
ENSSDUG00000006422	-	83	38.404	ENSTTRG00000008873	MEPCE	76	39.332	Tursiops_truncatus
ENSSDUG00000006422	-	77	39.489	ENSUAMG00000026470	MEPCE	75	38.627	Ursus_americanus
ENSSDUG00000006422	-	83	38.333	ENSUMAG00000010719	MEPCE	83	39.292	Ursus_maritimus
ENSSDUG00000006422	-	88	56.226	ENSXCOG00000013140	-	94	53.992	Xiphophorus_couchianus
ENSSDUG00000006422	-	67	58.667	ENSXCOG00000007070	mepce	60	63.025	Xiphophorus_couchianus
ENSSDUG00000006422	-	85	64.946	ENSXMAG00000016250	si:ch1073-157b13.1	96	59.032	Xiphophorus_maculatus