EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000006482 (Gene tree)
Gene ID: 111238391
Gene Symbol: mrpl16
Alias: zgc:91951
Full Name: mitochondrial ribosomal protein L16
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 4860 bases
Position: chrBDQW01001299.1:1317193-1322052
Accession: 111238391
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000008818	Ribosomal_L16	PF00252.18	1.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000008988	-	2752	XM_022767866	ENSSDUP00000008818	258 (aa)	XP_022623587	UPI000BBF24D4

Gene Model

Click here to download ENSSDUG00000006482's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000006482's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000006482	mrpl16	91	55.932	ENSG00000166902	MRPL16	99	65.882	Homo_sapiens
ENSSDUG00000006482	mrpl16	100	79.845	ENSAPOG00000003818	mrpl16	100	79.845	Acanthochromis_polyacanthus
ENSSDUG00000006482	mrpl16	87	61.333	ENSAMEG00000014289	MRPL16	90	61.333	Ailuropoda_melanoleuca
ENSSDUG00000006482	mrpl16	100	85.659	ENSACIG00000022204	mrpl16	100	85.659	Amphilophus_citrinellus
ENSSDUG00000006482	mrpl16	100	80.620	ENSAOCG00000002647	mrpl16	100	80.620	Amphiprion_ocellaris
ENSSDUG00000006482	mrpl16	100	80.620	ENSAPEG00000020339	mrpl16	100	80.620	Amphiprion_percula
ENSSDUG00000006482	mrpl16	100	86.434	ENSATEG00000012565	mrpl16	100	86.434	Anabas_testudineus
ENSSDUG00000006482	mrpl16	88	62.719	ENSACAG00000009952	MRPL16	90	62.719	Anolis_carolinensis
ENSSDUG00000006482	mrpl16	87	58.222	ENSANAG00000029141	MRPL16	90	58.222	Aotus_nancymaae
ENSSDUG00000006482	mrpl16	81	89.048	ENSACLG00000024282	mrpl16	92	89.048	Astatotilapia_calliptera
ENSSDUG00000006482	mrpl16	98	70.751	ENSAMXG00000014688	mrpl16	96	75.107	Astyanax_mexicanus
ENSSDUG00000006482	mrpl16	87	61.607	ENSBTAG00000021188	MRPL16	89	61.607	Bos_taurus
ENSSDUG00000006482	mrpl16	87	59.111	ENSCJAG00000016306	MRPL16	90	59.111	Callithrix_jacchus
ENSSDUG00000006482	mrpl16	87	59.821	ENSCAFG00000029686	-	89	59.821	Canis_familiaris
ENSSDUG00000006482	mrpl16	87	59.821	ENSCAFG00000031711	-	89	59.821	Canis_familiaris
ENSSDUG00000006482	mrpl16	87	59.821	ENSCAFG00020000230	MRPL16	89	59.821	Canis_lupus_dingo
ENSSDUG00000006482	mrpl16	87	60.714	ENSCHIG00000012712	MRPL16	89	60.714	Capra_hircus
ENSSDUG00000006482	mrpl16	91	58.898	ENSTSYG00000013336	MRPL16	94	58.898	Carlito_syrichta
ENSSDUG00000006482	mrpl16	87	58.482	ENSCPOG00000005035	MRPL16	89	58.482	Cavia_porcellus
ENSSDUG00000006482	mrpl16	87	58.667	ENSCCAG00000035372	MRPL16	90	58.667	Cebus_capucinus
ENSSDUG00000006482	mrpl16	87	57.333	ENSCATG00000035790	MRPL16	90	57.333	Cercocebus_atys
ENSSDUG00000006482	mrpl16	86	57.399	ENSCLAG00000003811	MRPL16	97	55.932	Chinchilla_lanigera
ENSSDUG00000006482	mrpl16	87	57.778	ENSCSAG00000006107	MRPL16	90	57.778	Chlorocebus_sabaeus
ENSSDUG00000006482	mrpl16	64	67.683	ENSCHOG00000009976	MRPL16	80	67.683	Choloepus_hoffmanni
ENSSDUG00000006482	mrpl16	88	60.965	ENSCPBG00000009578	MRPL16	91	60.965	Chrysemys_picta_bellii
ENSSDUG00000006482	mrpl16	60	39.744	ENSCING00000020946	-	85	39.744	Ciona_intestinalis
ENSSDUG00000006482	mrpl16	87	56.889	ENSCANG00000027375	MRPL16	90	56.889	Colobus_angolensis_palliatus
ENSSDUG00000006482	mrpl16	87	57.778	ENSCGRG00001000785	Mrpl16	90	57.778	Cricetulus_griseus_chok1gshd
ENSSDUG00000006482	mrpl16	81	59.048	ENSCGRG00000015073	Mrpl16	100	59.048	Cricetulus_griseus_crigri
ENSSDUG00000006482	mrpl16	100	77.132	ENSCSEG00000006169	mrpl16	100	77.132	Cynoglossus_semilaevis
ENSSDUG00000006482	mrpl16	100	81.783	ENSCVAG00000013739	mrpl16	100	81.783	Cyprinodon_variegatus
ENSSDUG00000006482	mrpl16	100	81.783	ENSCVAG00000014885	mrpl16	100	81.783	Cyprinodon_variegatus
ENSSDUG00000006482	mrpl16	100	62.791	ENSDARG00000075325	mrpl16	100	67.568	Danio_rerio
ENSSDUG00000006482	mrpl16	87	56.889	ENSDNOG00000034262	-	90	56.889	Dasypus_novemcinctus
ENSSDUG00000006482	mrpl16	78	40.594	ENSDNOG00000041871	-	99	40.594	Dasypus_novemcinctus
ENSSDUG00000006482	mrpl16	87	60.000	ENSDORG00000024946	Mrpl16	90	60.000	Dipodomys_ordii
ENSSDUG00000006482	mrpl16	81	48.826	FBgn0023519	mRpL16	88	48.826	Drosophila_melanogaster
ENSSDUG00000006482	mrpl16	62	64.596	ENSETEG00000011252	MRPL16	64	64.596	Echinops_telfairi
ENSSDUG00000006482	mrpl16	91	56.170	ENSEBUG00000001257	mrpl16	91	56.170	Eptatretus_burgeri
ENSSDUG00000006482	mrpl16	87	60.889	ENSEASG00005007994	MRPL16	90	60.889	Equus_asinus_asinus
ENSSDUG00000006482	mrpl16	87	60.444	ENSECAG00000014926	MRPL16	90	60.444	Equus_caballus
ENSSDUG00000006482	mrpl16	87	58.667	ENSEEUG00000011076	MRPL16	90	58.667	Erinaceus_europaeus
ENSSDUG00000006482	mrpl16	100	73.846	ENSELUG00000002608	mrpl16	100	73.846	Esox_lucius
ENSSDUG00000006482	mrpl16	87	60.444	ENSFCAG00000007540	MRPL16	90	60.444	Felis_catus
ENSSDUG00000006482	mrpl16	82	56.604	ENSFALG00000012123	MRPL16	99	57.143	Ficedula_albicollis
ENSSDUG00000006482	mrpl16	88	60.352	ENSFDAG00000012285	MRPL16	98	60.352	Fukomys_damarensis
ENSSDUG00000006482	mrpl16	100	79.457	ENSFHEG00000015359	mrpl16	98	79.457	Fundulus_heteroclitus
ENSSDUG00000006482	mrpl16	76	72.449	ENSGMOG00000008546	mrpl16	100	72.449	Gadus_morhua
ENSSDUG00000006482	mrpl16	77	55.779	ENSGALG00000029419	MRPL16	100	55.779	Gallus_gallus
ENSSDUG00000006482	mrpl16	100	77.519	ENSGAFG00000012264	mrpl16	100	77.519	Gambusia_affinis
ENSSDUG00000006482	mrpl16	100	85.659	ENSGACG00000015363	mrpl16	100	85.659	Gasterosteus_aculeatus
ENSSDUG00000006482	mrpl16	88	60.965	ENSGAGG00000023594	MRPL16	91	60.965	Gopherus_agassizii
ENSSDUG00000006482	mrpl16	91	55.882	ENSGGOG00000015703	MRPL16	95	55.882	Gorilla_gorilla
ENSSDUG00000006482	mrpl16	100	85.271	ENSHBUG00000001596	mrpl16	100	85.271	Haplochromis_burtoni
ENSSDUG00000006482	mrpl16	87	57.143	ENSHGLG00000010777	MRPL16	89	57.143	Heterocephalus_glaber_female
ENSSDUG00000006482	mrpl16	87	57.143	ENSHGLG00100010477	MRPL16	89	57.143	Heterocephalus_glaber_male
ENSSDUG00000006482	mrpl16	100	81.783	ENSHCOG00000003499	mrpl16	100	81.783	Hippocampus_comes
ENSSDUG00000006482	mrpl16	100	74.131	ENSIPUG00000009966	mrpl16	99	74.131	Ictalurus_punctatus
ENSSDUG00000006482	mrpl16	87	60.000	ENSSTOG00000021462	MRPL16	90	60.000	Ictidomys_tridecemlineatus
ENSSDUG00000006482	mrpl16	87	59.556	ENSJJAG00000018928	Mrpl16	90	59.556	Jaculus_jaculus
ENSSDUG00000006482	mrpl16	100	75.969	ENSKMAG00000022035	mrpl16	100	75.969	Kryptolebias_marmoratus
ENSSDUG00000006482	mrpl16	100	86.047	ENSLBEG00000013193	mrpl16	100	86.047	Labrus_bergylta
ENSSDUG00000006482	mrpl16	88	67.105	ENSLACG00000002060	MRPL16	91	67.105	Latimeria_chalumnae
ENSSDUG00000006482	mrpl16	100	68.992	ENSLOCG00000010979	mrpl16	100	68.992	Lepisosteus_oculatus
ENSSDUG00000006482	mrpl16	87	57.778	ENSLAFG00000001490	MRPL16	90	57.778	Loxodonta_africana
ENSSDUG00000006482	mrpl16	87	57.778	ENSMFAG00000002379	MRPL16	90	57.778	Macaca_fascicularis
ENSSDUG00000006482	mrpl16	87	57.778	ENSMMUG00000022321	MRPL16	90	57.778	Macaca_mulatta
ENSSDUG00000006482	mrpl16	87	57.778	ENSMNEG00000040325	MRPL16	90	57.778	Macaca_nemestrina
ENSSDUG00000006482	mrpl16	82	58.962	ENSMLEG00000033890	MRPL16	93	58.962	Mandrillus_leucophaeus
ENSSDUG00000006482	mrpl16	100	82.239	ENSMAMG00000003085	mrpl16	100	82.239	Mastacembelus_armatus
ENSSDUG00000006482	mrpl16	100	85.659	ENSMZEG00005000716	mrpl16	100	85.659	Maylandia_zebra
ENSSDUG00000006482	mrpl16	88	54.185	ENSMGAG00000003328	MRPL16	96	51.969	Meleagris_gallopavo
ENSSDUG00000006482	mrpl16	87	59.556	ENSMAUG00000011181	Mrpl16	90	59.556	Mesocricetus_auratus
ENSSDUG00000006482	mrpl16	91	59.322	ENSMICG00000011027	MRPL16	94	59.322	Microcebus_murinus
ENSSDUG00000006482	mrpl16	87	60.000	ENSMOCG00000003604	Mrpl16	89	61.611	Microtus_ochrogaster
ENSSDUG00000006482	mrpl16	100	87.308	ENSMMOG00000018112	mrpl16	100	87.308	Mola_mola
ENSSDUG00000006482	mrpl16	92	56.723	ENSMODG00000020205	MRPL16	94	56.723	Monodelphis_domestica
ENSSDUG00000006482	mrpl16	100	82.171	ENSMALG00000016263	mrpl16	100	82.171	Monopterus_albus
ENSSDUG00000006482	mrpl16	87	58.482	MGP_CAROLIEiJ_G0022733	Mrpl16	89	58.482	Mus_caroli
ENSSDUG00000006482	mrpl16	87	57.778	ENSMUSG00000024683	Mrpl16	90	57.778	Mus_musculus
ENSSDUG00000006482	mrpl16	87	58.222	MGP_PahariEiJ_G0014227	Mrpl16	90	58.222	Mus_pahari
ENSSDUG00000006482	mrpl16	87	57.778	MGP_SPRETEiJ_G0023648	Mrpl16	90	57.778	Mus_spretus
ENSSDUG00000006482	mrpl16	87	61.778	ENSMPUG00000014583	MRPL16	90	61.778	Mustela_putorius_furo
ENSSDUG00000006482	mrpl16	87	60.444	ENSMLUG00000011224	-	90	60.444	Myotis_lucifugus
ENSSDUG00000006482	mrpl16	87	52.000	ENSMLUG00000027025	-	89	52.000	Myotis_lucifugus
ENSSDUG00000006482	mrpl16	87	60.000	ENSNGAG00000010636	Mrpl16	90	60.000	Nannospalax_galili
ENSSDUG00000006482	mrpl16	100	86.822	ENSNBRG00000017868	mrpl16	100	86.822	Neolamprologus_brichardi
ENSSDUG00000006482	mrpl16	87	58.667	ENSNLEG00000013137	MRPL16	90	58.667	Nomascus_leucogenys
ENSSDUG00000006482	mrpl16	81	60.952	ENSMEUG00000016437	MRPL16	100	60.952	Notamacropus_eugenii
ENSSDUG00000006482	mrpl16	87	60.268	ENSOPRG00000014638	-	89	60.268	Ochotona_princeps
ENSSDUG00000006482	mrpl16	87	58.222	ENSODEG00000001664	MRPL16	90	58.222	Octodon_degus
ENSSDUG00000006482	mrpl16	100	86.434	ENSONIG00000003122	mrpl16	100	86.434	Oreochromis_niloticus
ENSSDUG00000006482	mrpl16	87	61.333	ENSOCUG00000013390	MRPL16	90	61.333	Oryctolagus_cuniculus
ENSSDUG00000006482	mrpl16	100	84.109	ENSORLG00000026229	mrpl16	100	84.109	Oryzias_latipes
ENSSDUG00000006482	mrpl16	100	84.496	ENSORLG00020016055	mrpl16	75	84.496	Oryzias_latipes_hni
ENSSDUG00000006482	mrpl16	100	83.721	ENSORLG00015014562	mrpl16	95	83.721	Oryzias_latipes_hsok
ENSSDUG00000006482	mrpl16	100	82.558	ENSOMEG00000016848	mrpl16	100	82.558	Oryzias_melastigma
ENSSDUG00000006482	mrpl16	91	58.475	ENSOGAG00000001486	MRPL16	94	58.475	Otolemur_garnettii
ENSSDUG00000006482	mrpl16	87	60.714	ENSOARG00000012266	MRPL16	89	60.714	Ovis_aries
ENSSDUG00000006482	mrpl16	87	57.333	ENSPPAG00000038990	MRPL16	90	57.333	Pan_paniscus
ENSSDUG00000006482	mrpl16	87	60.444	ENSPPRG00000013233	MRPL16	90	60.444	Panthera_pardus
ENSSDUG00000006482	mrpl16	87	60.444	ENSPTIG00000014818	MRPL16	90	60.444	Panthera_tigris_altaica
ENSSDUG00000006482	mrpl16	87	57.333	ENSPTRG00000003700	MRPL16	90	57.333	Pan_troglodytes
ENSSDUG00000006482	mrpl16	87	57.333	ENSPANG00000010272	MRPL16	90	57.333	Papio_anubis
ENSSDUG00000006482	mrpl16	100	66.279	ENSPKIG00000010334	mrpl16	100	66.279	Paramormyrops_kingsleyae
ENSSDUG00000006482	mrpl16	95	57.959	ENSPSIG00000016182	MRPL16	99	57.959	Pelodiscus_sinensis
ENSSDUG00000006482	mrpl16	100	75.969	ENSPMGG00000001444	mrpl16	100	75.969	Periophthalmus_magnuspinnatus
ENSSDUG00000006482	mrpl16	87	58.222	ENSPEMG00000001887	Mrpl16	90	58.222	Peromyscus_maniculatus_bairdii
ENSSDUG00000006482	mrpl16	99	55.894	ENSPMAG00000001603	mrpl16	99	55.894	Petromyzon_marinus
ENSSDUG00000006482	mrpl16	88	59.735	ENSPCIG00000009443	MRPL16	90	59.735	Phascolarctos_cinereus
ENSSDUG00000006482	mrpl16	100	79.457	ENSPFOG00000009144	mrpl16	100	79.457	Poecilia_formosa
ENSSDUG00000006482	mrpl16	100	79.457	ENSPLAG00000010811	mrpl16	100	79.457	Poecilia_latipinna
ENSSDUG00000006482	mrpl16	100	79.457	ENSPMEG00000023095	mrpl16	100	79.457	Poecilia_mexicana
ENSSDUG00000006482	mrpl16	100	74.615	ENSPREG00000021826	mrpl16	100	78.723	Poecilia_reticulata
ENSSDUG00000006482	mrpl16	87	56.889	ENSPPYG00000003227	MRPL16	90	56.889	Pongo_abelii
ENSSDUG00000006482	mrpl16	87	58.222	ENSPCAG00000008055	MRPL16	90	58.222	Procavia_capensis
ENSSDUG00000006482	mrpl16	91	59.746	ENSPCOG00000025205	MRPL16	94	59.746	Propithecus_coquereli
ENSSDUG00000006482	mrpl16	87	60.444	ENSPVAG00000012250	MRPL16	90	60.444	Pteropus_vampyrus
ENSSDUG00000006482	mrpl16	100	84.496	ENSPNYG00000003647	mrpl16	100	84.496	Pundamilia_nyererei
ENSSDUG00000006482	mrpl16	99	72.941	ENSPNAG00000010473	mrpl16	100	72.941	Pygocentrus_nattereri
ENSSDUG00000006482	mrpl16	87	57.778	ENSRNOG00000021005	Mrpl16	90	57.778	Rattus_norvegicus
ENSSDUG00000006482	mrpl16	87	58.667	ENSRBIG00000018289	MRPL16	90	58.667	Rhinopithecus_bieti
ENSSDUG00000006482	mrpl16	87	58.222	ENSRROG00000040273	MRPL16	90	58.222	Rhinopithecus_roxellana
ENSSDUG00000006482	mrpl16	87	57.778	ENSSBOG00000005353	MRPL16	94	59.242	Saimiri_boliviensis_boliviensis
ENSSDUG00000006482	mrpl16	88	60.619	ENSSHAG00000006665	MRPL16	90	60.619	Sarcophilus_harrisii
ENSSDUG00000006482	mrpl16	88	71.806	ENSSFOG00015008725	mrpl16	89	72.381	Scleropages_formosus
ENSSDUG00000006482	mrpl16	100	89.147	ENSSMAG00000021324	mrpl16	100	89.147	Scophthalmus_maximus
ENSSDUG00000006482	mrpl16	100	99.612	ENSSLDG00000000994	mrpl16	100	99.612	Seriola_lalandi_dorsalis
ENSSDUG00000006482	mrpl16	81	61.905	ENSSARG00000004666	MRPL16	100	61.905	Sorex_araneus
ENSSDUG00000006482	mrpl16	95	55.738	ENSSPUG00000018047	MRPL16	97	55.738	Sphenodon_punctatus
ENSSDUG00000006482	mrpl16	100	80.233	ENSSPAG00000017237	mrpl16	100	80.233	Stegastes_partitus
ENSSDUG00000006482	mrpl16	87	60.889	ENSSSCG00000013118	MRPL16	90	60.889	Sus_scrofa
ENSSDUG00000006482	mrpl16	57	55.405	ENSTGUG00000006277	MRPL16	100	55.405	Taeniopygia_guttata
ENSSDUG00000006482	mrpl16	91	76.068	ENSTRUG00000017231	mrpl16	90	76.068	Takifugu_rubripes
ENSSDUG00000006482	mrpl16	100	81.154	ENSTNIG00000009438	mrpl16	100	81.154	Tetraodon_nigroviridis
ENSSDUG00000006482	mrpl16	87	58.667	ENSTBEG00000007959	MRPL16	90	58.667	Tupaia_belangeri
ENSSDUG00000006482	mrpl16	87	59.111	ENSTTRG00000009428	MRPL16	90	59.111	Tursiops_truncatus
ENSSDUG00000006482	mrpl16	87	60.444	ENSUAMG00000009824	MRPL16	98	61.860	Ursus_americanus
ENSSDUG00000006482	mrpl16	87	60.889	ENSUMAG00000018814	MRPL16	98	62.326	Ursus_maritimus
ENSSDUG00000006482	mrpl16	87	59.821	ENSVVUG00000026682	MRPL16	92	59.821	Vulpes_vulpes
ENSSDUG00000006482	mrpl16	91	56.780	ENSXETG00000024210	mrpl16	93	56.780	Xenopus_tropicalis
ENSSDUG00000006482	mrpl16	92	79.832	ENSXCOG00000002880	mrpl16	96	79.832	Xiphophorus_couchianus
ENSSDUG00000006482	mrpl16	100	79.070	ENSXMAG00000019187	mrpl16	100	79.070	Xiphophorus_maculatus