EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000006507 (Gene tree)
Gene ID: 111219970
Gene Symbol: sall1a
Alias: cb896|id:ibd5077|sall1|sb:eu809|spa1a|spalt1a
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 12517 bases
Position: chrBDQW01000003.1:9594906-9607422
Accession: 111219970
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000008846	zf-C2H2	PF00096.26	3.1e-37	1	7
ENSSDUP00000008846	zf-C2H2	PF00096.26	3.1e-37	2	7
ENSSDUP00000008846	zf-C2H2	PF00096.26	3.1e-37	3	7
ENSSDUP00000008846	zf-C2H2	PF00096.26	3.1e-37	4	7
ENSSDUP00000008846	zf-C2H2	PF00096.26	3.1e-37	5	7
ENSSDUP00000008846	zf-C2H2	PF00096.26	3.1e-37	6	7
ENSSDUP00000008846	zf-C2H2	PF00096.26	3.1e-37	7	7
ENSSDUP00000008842	zf-C2H2	PF00096.26	4.4e-35	1	7
ENSSDUP00000008842	zf-C2H2	PF00096.26	4.4e-35	2	7
ENSSDUP00000008842	zf-C2H2	PF00096.26	4.4e-35	3	7
ENSSDUP00000008842	zf-C2H2	PF00096.26	4.4e-35	4	7
ENSSDUP00000008842	zf-C2H2	PF00096.26	4.4e-35	5	7
ENSSDUP00000008842	zf-C2H2	PF00096.26	4.4e-35	6	7
ENSSDUP00000008842	zf-C2H2	PF00096.26	4.4e-35	7	7
ENSSDUP00000008846	zf-met	PF12874.7	5.1e-24	1	5
ENSSDUP00000008846	zf-met	PF12874.7	5.1e-24	2	5
ENSSDUP00000008846	zf-met	PF12874.7	5.1e-24	3	5
ENSSDUP00000008846	zf-met	PF12874.7	5.1e-24	4	5
ENSSDUP00000008846	zf-met	PF12874.7	5.1e-24	5	5
ENSSDUP00000008842	zf-met	PF12874.7	8.8e-24	1	5
ENSSDUP00000008842	zf-met	PF12874.7	8.8e-24	2	5
ENSSDUP00000008842	zf-met	PF12874.7	8.8e-24	3	5
ENSSDUP00000008842	zf-met	PF12874.7	8.8e-24	4	5
ENSSDUP00000008842	zf-met	PF12874.7	8.8e-24	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000009020	-	5223	-	ENSSDUP00000008846	1210 (aa)	-	-
ENSSDUT00000009016	-	6001	XM_022742860	ENSSDUP00000008842	1306 (aa)	XP_022598581	UPI000BBF3551

Gene Model

Click here to download ENSSDUG00000006507's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000006507's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000006507	sall1a	54	52.000	ENSSDUG00000009601	-	90	56.000
ENSSDUG00000006507	sall1a	82	59.184	ENSSDUG00000000748	sall1b	99	59.184
ENSSDUG00000006507	sall1a	50	36.364	ENSSDUG00000008943	-	99	54.717
ENSSDUG00000006507	sall1a	97	63.265	ENSSDUG00000011099	sall3a	90	67.857
ENSSDUG00000006507	sall1a	51	48.000	ENSSDUG00000000695	-	69	48.000
ENSSDUG00000006507	sall1a	99	65.385	ENSSDUG00000004657	sall4	99	65.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000006507	sall1a	100	68.731	ENSG00000103449	SALL1	100	69.277	Homo_sapiens
ENSSDUG00000006507	sall1a	99	95.620	ENSAPOG00000022764	sall1a	99	95.559	Acanthochromis_polyacanthus
ENSSDUG00000006507	sall1a	100	68.145	ENSAMEG00000006817	SALL1	100	68.165	Ailuropoda_melanoleuca
ENSSDUG00000006507	sall1a	99	93.645	ENSACIG00000004231	sall1a	99	93.645	Amphilophus_citrinellus
ENSSDUG00000006507	sall1a	99	96.116	ENSAOCG00000002800	sall1a	99	96.018	Amphiprion_ocellaris
ENSSDUG00000006507	sall1a	99	96.033	ENSAPEG00000010179	sall1a	99	95.942	Amphiprion_percula
ENSSDUG00000006507	sall1a	100	95.103	ENSATEG00000003006	sall1a	100	95.103	Anabas_testudineus
ENSSDUG00000006507	sall1a	99	70.150	ENSAPLG00000003356	SALL1	99	70.376	Anas_platyrhynchos
ENSSDUG00000006507	sall1a	99	68.476	ENSACAG00000014399	SALL1	96	67.703	Anolis_carolinensis
ENSSDUG00000006507	sall1a	100	68.685	ENSANAG00000027238	SALL1	100	69.305	Aotus_nancymaae
ENSSDUG00000006507	sall1a	99	94.104	ENSACLG00000017148	sall1a	99	94.104	Astatotilapia_calliptera
ENSSDUG00000006507	sall1a	99	81.569	ENSAMXG00000018599	sall1a	99	81.950	Astyanax_mexicanus
ENSSDUG00000006507	sall1a	99	51.887	ENSAMXG00000017702	sall1b	99	52.663	Astyanax_mexicanus
ENSSDUG00000006507	sall1a	100	68.167	ENSBTAG00000008544	SALL1	100	68.433	Bos_taurus
ENSSDUG00000006507	sall1a	100	68.984	ENSCJAG00000001740	SALL1	100	69.604	Callithrix_jacchus
ENSSDUG00000006507	sall1a	100	68.498	ENSCAFG00000009755	SALL1	100	68.685	Canis_familiaris
ENSSDUG00000006507	sall1a	100	68.498	ENSCAFG00020002842	SALL1	100	68.685	Canis_lupus_dingo
ENSSDUG00000006507	sall1a	100	68.039	ENSCHIG00000026074	SALL1	100	68.362	Capra_hircus
ENSSDUG00000006507	sall1a	100	69.484	ENSTSYG00000029464	SALL1	100	69.536	Carlito_syrichta
ENSSDUG00000006507	sall1a	100	68.710	ENSCPOG00000006564	SALL1	100	68.674	Cavia_porcellus
ENSSDUG00000006507	sall1a	100	67.040	ENSCCAG00000001639	SALL1	100	67.513	Cebus_capucinus
ENSSDUG00000006507	sall1a	100	68.909	ENSCATG00000004982	SALL1	100	69.529	Cercocebus_atys
ENSSDUG00000006507	sall1a	100	68.331	ENSCLAG00000006380	SALL1	100	68.354	Chinchilla_lanigera
ENSSDUG00000006507	sall1a	100	68.311	ENSCSAG00000005319	SALL1	100	68.783	Chlorocebus_sabaeus
ENSSDUG00000006507	sall1a	71	66.998	ENSCHOG00000000800	-	69	65.882	Choloepus_hoffmanni
ENSSDUG00000006507	sall1a	99	69.970	ENSCPBG00000015924	SALL1	99	70.495	Chrysemys_picta_bellii
ENSSDUG00000006507	sall1a	100	69.357	ENSCANG00000036664	SALL1	100	69.708	Colobus_angolensis_palliatus
ENSSDUG00000006507	sall1a	100	67.339	ENSCGRG00001023314	-	100	67.638	Cricetulus_griseus_chok1gshd
ENSSDUG00000006507	sall1a	100	67.284	ENSCGRG00000009496	Sall1	100	67.607	Cricetulus_griseus_crigri
ENSSDUG00000006507	sall1a	100	93.163	ENSCSEG00000009349	sall1a	100	92.901	Cynoglossus_semilaevis
ENSSDUG00000006507	sall1a	90	91.660	ENSCVAG00000020513	sall1a	99	91.660	Cyprinodon_variegatus
ENSSDUG00000006507	sall1a	100	79.836	ENSDARG00000074319	sall1a	99	79.772	Danio_rerio
ENSSDUG00000006507	sall1a	99	47.734	ENSDARG00000075891	sall1b	99	47.112	Danio_rerio
ENSSDUG00000006507	sall1a	100	69.051	ENSDNOG00000016413	SALL1	100	68.955	Dasypus_novemcinctus
ENSSDUG00000006507	sall1a	100	68.548	ENSETEG00000015150	SALL1	100	68.502	Echinops_telfairi
ENSSDUG00000006507	sall1a	67	42.943	ENSEBUG00000008798	SALL1	94	36.468	Eptatretus_burgeri
ENSSDUG00000006507	sall1a	64	65.385	ENSEBUG00000011732	SALL1	97	65.385	Eptatretus_burgeri
ENSSDUG00000006507	sall1a	100	68.614	ENSEASG00005014602	SALL1	100	68.914	Equus_asinus_asinus
ENSSDUG00000006507	sall1a	91	66.639	ENSECAG00000011334	SALL1	99	66.887	Equus_caballus
ENSSDUG00000006507	sall1a	100	68.896	ENSEEUG00000002014	SALL1	100	68.702	Erinaceus_europaeus
ENSSDUG00000006507	sall1a	99	54.421	ENSELUG00000017774	-	99	54.911	Esox_lucius
ENSSDUG00000006507	sall1a	100	78.164	ENSELUG00000006159	sall1a	99	78.592	Esox_lucius
ENSSDUG00000006507	sall1a	100	67.311	ENSFCAG00000024654	SALL1	100	67.906	Felis_catus
ENSSDUG00000006507	sall1a	99	70.526	ENSFALG00000000074	SALL1	99	70.730	Ficedula_albicollis
ENSSDUG00000006507	sall1a	99	92.727	ENSFHEG00000012579	sall1a	99	92.573	Fundulus_heteroclitus
ENSSDUG00000006507	sall1a	75	63.265	ENSFHEG00000008424	-	99	65.816	Fundulus_heteroclitus
ENSSDUG00000006507	sall1a	99	85.736	ENSGMOG00000006103	sall1a	99	85.736	Gadus_morhua
ENSSDUG00000006507	sall1a	97	40.372	ENSGMOG00000013383	-	98	41.115	Gadus_morhua
ENSSDUG00000006507	sall1a	99	70.451	ENSGALG00000039238	SALL1	99	70.579	Gallus_gallus
ENSSDUG00000006507	sall1a	99	92.890	ENSGAFG00000009964	sall1a	99	92.890	Gambusia_affinis
ENSSDUG00000006507	sall1a	100	92.349	ENSGACG00000016702	sall1a	100	92.349	Gasterosteus_aculeatus
ENSSDUG00000006507	sall1a	99	69.895	ENSGAGG00000013979	SALL1	99	70.420	Gopherus_agassizii
ENSSDUG00000006507	sall1a	100	68.862	ENSGGOG00000000663	SALL1	100	69.213	Gorilla_gorilla
ENSSDUG00000006507	sall1a	99	94.028	ENSHBUG00000022005	sall1a	99	94.028	Haplochromis_burtoni
ENSSDUG00000006507	sall1a	100	68.741	ENSHGLG00000004288	-	100	69.288	Heterocephalus_glaber_female
ENSSDUG00000006507	sall1a	100	68.741	ENSHGLG00100017496	SALL1	100	69.288	Heterocephalus_glaber_male
ENSSDUG00000006507	sall1a	99	85.920	ENSHCOG00000000974	sall1a	99	85.844	Hippocampus_comes
ENSSDUG00000006507	sall1a	99	51.764	ENSIPUG00000022928	sall1b	99	51.098	Ictalurus_punctatus
ENSSDUG00000006507	sall1a	99	81.594	ENSIPUG00000016265	SALL1	99	80.564	Ictalurus_punctatus
ENSSDUG00000006507	sall1a	100	68.300	ENSSTOG00000020885	SALL1	100	68.648	Ictidomys_tridecemlineatus
ENSSDUG00000006507	sall1a	99	93.388	ENSKMAG00000016681	sall1a	99	93.338	Kryptolebias_marmoratus
ENSSDUG00000006507	sall1a	100	92.498	ENSLBEG00000012207	sall1a	96	92.488	Labrus_bergylta
ENSSDUG00000006507	sall1a	99	69.503	ENSLACG00000003556	SALL1	99	69.654	Latimeria_chalumnae
ENSSDUG00000006507	sall1a	99	38.743	ENSLACG00000014018	-	93	39.739	Latimeria_chalumnae
ENSSDUG00000006507	sall1a	99	78.868	ENSLOCG00000007283	sall1b	99	78.900	Lepisosteus_oculatus
ENSSDUG00000006507	sall1a	100	68.629	ENSLAFG00000015251	SALL1	100	68.674	Loxodonta_africana
ENSSDUG00000006507	sall1a	100	69.081	ENSMFAG00000003298	SALL1	100	69.604	Macaca_fascicularis
ENSSDUG00000006507	sall1a	100	68.841	ENSMMUG00000017200	SALL1	100	69.404	Macaca_mulatta
ENSSDUG00000006507	sall1a	100	69.187	ENSMNEG00000034770	SALL1	100	69.243	Macaca_nemestrina
ENSSDUG00000006507	sall1a	100	69.357	ENSMLEG00000036406	SALL1	100	69.708	Mandrillus_leucophaeus
ENSSDUG00000006507	sall1a	100	95.795	ENSMAMG00000004164	sall1a	100	95.795	Mastacembelus_armatus
ENSSDUG00000006507	sall1a	99	94.028	ENSMZEG00005006479	sall1a	99	94.028	Maylandia_zebra
ENSSDUG00000006507	sall1a	99	70.235	ENSMGAG00000004704	SALL1	99	70.399	Meleagris_gallopavo
ENSSDUG00000006507	sall1a	100	66.967	ENSMAUG00000019093	Sall1	100	67.267	Mesocricetus_auratus
ENSSDUG00000006507	sall1a	100	68.539	ENSMICG00000036486	SALL1	100	68.666	Microcebus_murinus
ENSSDUG00000006507	sall1a	100	93.573	ENSMMOG00000016400	sall1a	100	93.573	Mola_mola
ENSSDUG00000006507	sall1a	100	69.597	ENSMODG00000013114	SALL1	100	69.565	Monodelphis_domestica
ENSSDUG00000006507	sall1a	100	95.128	ENSMALG00000013400	sall1a	100	95.027	Monopterus_albus
ENSSDUG00000006507	sall1a	100	67.013	MGP_CAROLIEiJ_G0031362	Sall1	100	67.333	Mus_caroli
ENSSDUG00000006507	sall1a	100	66.741	ENSMUSG00000031665	Sall1	100	67.235	Mus_musculus
ENSSDUG00000006507	sall1a	100	66.642	MGP_PahariEiJ_G0022961	Sall1	100	66.913	Mus_pahari
ENSSDUG00000006507	sall1a	100	66.667	MGP_SPRETEiJ_G0032480	Sall1	100	67.161	Mus_spretus
ENSSDUG00000006507	sall1a	100	67.661	ENSMPUG00000003265	SALL1	96	67.705	Mustela_putorius_furo
ENSSDUG00000006507	sall1a	100	65.942	ENSMLUG00000015541	SALL1	99	66.284	Myotis_lucifugus
ENSSDUG00000006507	sall1a	99	94.181	ENSNBRG00000009307	sall1a	99	94.181	Neolamprologus_brichardi
ENSSDUG00000006507	sall1a	95	81.111	ENSNLEG00000001008	SALL1	99	81.111	Nomascus_leucogenys
ENSSDUG00000006507	sall1a	100	69.555	ENSMEUG00000012206	SALL1	100	69.647	Notamacropus_eugenii
ENSSDUG00000006507	sall1a	87	73.421	ENSOPRG00000005645	SALL1	71	73.049	Ochotona_princeps
ENSSDUG00000006507	sall1a	100	68.614	ENSODEG00000003685	SALL1	100	68.488	Octodon_degus
ENSSDUG00000006507	sall1a	99	94.410	ENSONIG00000002831	sall1a	99	94.410	Oreochromis_niloticus
ENSSDUG00000006507	sall1a	95	64.059	ENSOANG00000013399	SALL1	97	77.049	Ornithorhynchus_anatinus
ENSSDUG00000006507	sall1a	99	92.479	ENSORLG00000013827	sall1a	99	92.984	Oryzias_latipes
ENSSDUG00000006507	sall1a	99	92.479	ENSORLG00020020570	sall1a	99	92.343	Oryzias_latipes_hni
ENSSDUG00000006507	sall1a	99	92.479	ENSORLG00015018830	sall1a	99	92.984	Oryzias_latipes_hsok
ENSSDUG00000006507	sall1a	99	92.645	ENSOMEG00000016043	sall1a	99	92.645	Oryzias_melastigma
ENSSDUG00000006507	sall1a	100	68.904	ENSOGAG00000027316	SALL1	100	69.058	Otolemur_garnettii
ENSSDUG00000006507	sall1a	100	64.195	ENSOARG00000017583	SALL1	100	64.093	Ovis_aries
ENSSDUG00000006507	sall1a	100	51.168	ENSPPAG00000035136	-	100	51.618	Pan_paniscus
ENSSDUG00000006507	sall1a	100	68.946	ENSPPAG00000035657	SALL1	100	69.535	Pan_paniscus
ENSSDUG00000006507	sall1a	100	67.230	ENSPPRG00000023283	SALL1	100	67.825	Panthera_pardus
ENSSDUG00000006507	sall1a	89	72.180	ENSPTIG00000013539	-	94	72.212	Panthera_tigris_altaica
ENSSDUG00000006507	sall1a	99	51.261	ENSPTRG00000045256	-	99	51.954	Pan_troglodytes
ENSSDUG00000006507	sall1a	100	68.852	ENSPTRG00000008108	SALL1	100	69.455	Pan_troglodytes
ENSSDUG00000006507	sall1a	100	69.283	ENSPANG00000024176	SALL1	100	69.634	Papio_anubis
ENSSDUG00000006507	sall1a	99	73.491	ENSPKIG00000022251	sall1a	99	73.374	Paramormyrops_kingsleyae
ENSSDUG00000006507	sall1a	99	71.266	ENSPKIG00000005383	-	99	71.645	Paramormyrops_kingsleyae
ENSSDUG00000006507	sall1a	99	70.226	ENSPSIG00000008582	SALL1	99	70.429	Pelodiscus_sinensis
ENSSDUG00000006507	sall1a	100	87.222	ENSPMGG00000021788	sall1a	100	85.736	Periophthalmus_magnuspinnatus
ENSSDUG00000006507	sall1a	99	49.722	ENSPMAG00000008148	sall1b	96	49.436	Petromyzon_marinus
ENSSDUG00000006507	sall1a	100	69.685	ENSPCIG00000017840	SALL1	100	69.647	Phascolarctos_cinereus
ENSSDUG00000006507	sall1a	99	92.904	ENSPFOG00000015799	sall1a	96	92.846	Poecilia_formosa
ENSSDUG00000006507	sall1a	99	93.119	ENSPLAG00000022539	sall1a	99	93.119	Poecilia_latipinna
ENSSDUG00000006507	sall1a	99	93.272	ENSPMEG00000020894	sall1a	99	93.272	Poecilia_mexicana
ENSSDUG00000006507	sall1a	99	92.737	ENSPREG00000006802	sall1a	99	92.737	Poecilia_reticulata
ENSSDUG00000006507	sall1a	90	67.812	ENSPPYG00000007345	SALL1	96	68.425	Pongo_abelii
ENSSDUG00000006507	sall1a	84	70.370	ENSPCAG00000008162	SALL1	93	70.370	Procavia_capensis
ENSSDUG00000006507	sall1a	100	68.464	ENSPCOG00000028192	SALL1	100	68.937	Propithecus_coquereli
ENSSDUG00000006507	sall1a	72	70.473	ENSPVAG00000015374	SALL1	100	70.751	Pteropus_vampyrus
ENSSDUG00000006507	sall1a	99	94.181	ENSPNYG00000010865	sall1a	99	94.181	Pundamilia_nyererei
ENSSDUG00000006507	sall1a	58	65.306	ENSPNAG00000028248	-	99	66.837	Pygocentrus_nattereri
ENSSDUG00000006507	sall1a	99	79.985	ENSPNAG00000023644	sall1a	99	80.137	Pygocentrus_nattereri
ENSSDUG00000006507	sall1a	99	53.985	ENSPNAG00000007442	sall1b	99	53.916	Pygocentrus_nattereri
ENSSDUG00000006507	sall1a	100	67.438	ENSRNOG00000013907	Sall1	100	67.588	Rattus_norvegicus
ENSSDUG00000006507	sall1a	100	68.735	ENSRBIG00000015707	SALL1	100	69.243	Rhinopithecus_bieti
ENSSDUG00000006507	sall1a	100	68.735	ENSRROG00000035777	SALL1	100	69.243	Rhinopithecus_roxellana
ENSSDUG00000006507	sall1a	100	68.857	ENSSBOG00000032186	SALL1	100	69.529	Saimiri_boliviensis_boliviensis
ENSSDUG00000006507	sall1a	100	68.988	ENSSHAG00000009477	SALL1	100	68.896	Sarcophilus_harrisii
ENSSDUG00000006507	sall1a	99	74.734	ENSSFOG00015020020	sall1a	99	73.660	Scleropages_formosus
ENSSDUG00000006507	sall1a	99	72.549	ENSSFOG00015001590	sall1a	99	72.608	Scleropages_formosus
ENSSDUG00000006507	sall1a	100	96.172	ENSSMAG00000009160	sall1a	100	96.172	Scophthalmus_maximus
ENSSDUG00000006507	sall1a	100	99.770	ENSSLDG00000017721	sall1a	100	99.770	Seriola_lalandi_dorsalis
ENSSDUG00000006507	sall1a	99	67.817	ENSSARG00000000661	SALL1	100	68.185	Sorex_araneus
ENSSDUG00000006507	sall1a	99	69.323	ENSSPUG00000000156	SALL1	99	69.699	Sphenodon_punctatus
ENSSDUG00000006507	sall1a	99	96.119	ENSSPAG00000021615	sall1a	99	96.098	Stegastes_partitus
ENSSDUG00000006507	sall1a	100	67.578	ENSSSCG00000002836	SALL1	100	67.961	Sus_scrofa
ENSSDUG00000006507	sall1a	99	70.150	ENSTGUG00000007514	SALL1	99	70.203	Taeniopygia_guttata
ENSSDUG00000006507	sall1a	91	89.372	ENSTRUG00000008950	sall1a	100	89.372	Takifugu_rubripes
ENSSDUG00000006507	sall1a	92	87.760	ENSTNIG00000004257	sall1a	100	87.760	Tetraodon_nigroviridis
ENSSDUG00000006507	sall1a	67	77.397	ENSTBEG00000002119	-	53	77.397	Tupaia_belangeri
ENSSDUG00000006507	sall1a	90	67.003	ENSUAMG00000023379	-	92	67.448	Ursus_americanus
ENSSDUG00000006507	sall1a	90	67.029	ENSVVUG00000019383	-	99	67.420	Vulpes_vulpes
ENSSDUG00000006507	sall1a	97	34.739	ENSXETG00000017176	sall2	94	38.188	Xenopus_tropicalis
ENSSDUG00000006507	sall1a	99	67.690	ENSXETG00000018417	sall1	99	65.934	Xenopus_tropicalis
ENSSDUG00000006507	sall1a	99	92.966	ENSXMAG00000016273	sall1a	99	92.966	Xiphophorus_maculatus