EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000006543 (Gene tree)
Gene ID: 111235031
Gene Symbol: RAB29
Alias: RAB7L|RAB7L1
Full Name: ras-related protein Rab-7L1-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 10361 bases
Position: chrBDQW01000468.1:5211589-5221949
Accession: 111235031
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000008908	MMR_HSR1	PF01926.23	2.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000009069	RAB29-201	3075	XM_022763323	ENSSDUP00000008893	197 (aa)	XP_022619044	-
ENSSDUT00000009084	RAB29-202	600	XM_022763321	ENSSDUP00000008908	199 (aa)	XP_022619042	-

Gene Model

Click here to download ENSSDUG00000006543's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000006543's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000006543	RAB29	80	33.125	ENSSDUG00000006618	RAB17	68	33.125
ENSSDUG00000006543	RAB29	97	31.841	ENSSDUG00000023008	rab5c	89	31.841
ENSSDUG00000006543	RAB29	75	35.333	ENSSDUG00000005960	rab18b	71	35.333
ENSSDUG00000006543	RAB29	79	40.127	ENSSDUG00000005037	-	73	40.127
ENSSDUG00000006543	RAB29	82	35.366	ENSSDUG00000008011	-	79	35.366
ENSSDUG00000006543	RAB29	84	37.870	ENSSDUG00000004950	rab35b	98	34.146
ENSSDUG00000006543	RAB29	76	35.484	ENSSDUG00000023508	rab23	75	37.805
ENSSDUG00000006543	RAB29	97	31.156	ENSSDUG00000013496	-	93	31.156
ENSSDUG00000006543	RAB29	85	32.402	ENSSDUG00000009122	rheb	92	32.402
ENSSDUG00000006543	RAB29	61	31.967	ENSSDUG00000012529	arl8bb	61	31.967
ENSSDUG00000006543	RAB29	97	32.663	ENSSDUG00000009835	rab5aa	89	32.663
ENSSDUG00000006543	RAB29	77	31.169	ENSSDUG00000006260	rab25b	76	31.169
ENSSDUG00000006543	RAB29	83	34.132	ENSSDUG00000014091	-	77	34.132
ENSSDUG00000006543	RAB29	88	32.402	ENSSDUG00000013724	rab2a	77	33.750
ENSSDUG00000006543	RAB29	68	30.882	ENSSDUG00000000578	arl8a	68	30.882
ENSSDUG00000006543	RAB29	76	39.490	ENSSDUG00000019885	-	63	39.490
ENSSDUG00000006543	RAB29	85	37.791	ENSSDUG00000008505	rab12	79	35.678
ENSSDUG00000006543	RAB29	86	35.028	ENSSDUG00000008151	zgc:101559	74	35.028
ENSSDUG00000006543	RAB29	98	30.049	ENSSDUG00000009735	rab25a	93	30.049
ENSSDUG00000006543	RAB29	99	32.843	ENSSDUG00000016888	rab1ab	91	32.843
ENSSDUG00000006543	RAB29	61	38.843	ENSSDUG00000003823	rab18a	95	30.808
ENSSDUG00000006543	RAB29	81	37.037	ENSSDUG00000013050	-	73	37.037
ENSSDUG00000006543	RAB29	84	34.524	ENSSDUG00000004445	zgc:171927	76	34.524
ENSSDUG00000006543	RAB29	80	33.540	ENSSDUG00000013558	rab11bb	71	33.540
ENSSDUG00000006543	RAB29	79	32.704	ENSSDUG00000006278	rab11al	71	32.704
ENSSDUG00000006543	RAB29	84	38.095	ENSSDUG00000005719	si:dkey-16l2.16	97	33.493
ENSSDUG00000006543	RAB29	98	35.961	ENSSDUG00000003386	rab9a	97	35.961
ENSSDUG00000006543	RAB29	84	35.119	ENSSDUG00000011851	rab42a	75	35.119
ENSSDUG00000006543	RAB29	99	33.333	ENSSDUG00000022535	RAB1A	98	33.333
ENSSDUG00000006543	RAB29	97	33.005	ENSSDUG00000005627	rab15	92	33.005
ENSSDUG00000006543	RAB29	81	32.530	ENSSDUG00000014765	rabl2	69	32.530
ENSSDUG00000006543	RAB29	85	36.628	ENSSDUG00000001791	rab33ba	69	36.628
ENSSDUG00000006543	RAB29	88	37.778	ENSSDUG00000006307	-	87	37.778
ENSSDUG00000006543	RAB29	83	33.533	ENSSDUG00000004633	RAB15	76	33.533
ENSSDUG00000006543	RAB29	97	30.693	ENSSDUG00000009251	rab6bb	93	30.693
ENSSDUG00000006543	RAB29	78	40.000	ENSSDUG00000019738	si:dkey-13a21.4	76	40.000
ENSSDUG00000006543	RAB29	79	34.591	ENSSDUG00000002580	rab11a	71	34.591
ENSSDUG00000006543	RAB29	79	31.250	ENSSDUG00000007311	rhebl1	83	31.250
ENSSDUG00000006543	RAB29	80	33.540	ENSSDUG00000002965	rab11ba	72	33.125
ENSSDUG00000006543	RAB29	78	39.744	ENSSDUG00000007575	rab9b	76	39.744
ENSSDUG00000006543	RAB29	84	34.682	ENSSDUG00000013968	rab33a	69	34.682
ENSSDUG00000006543	RAB29	97	30.151	ENSSDUG00000021882	rab6ba	93	30.151
ENSSDUG00000006543	RAB29	79	37.342	ENSSDUG00000004551	rab14	71	37.342
ENSSDUG00000006543	RAB29	99	31.841	ENSSDUG00000004698	rab1ba	97	31.841
ENSSDUG00000006543	RAB29	80	33.540	ENSSDUG00000002934	-	71	33.540
ENSSDUG00000006543	RAB29	50	31.683	ENSSDUG00000010675	si:ch73-116o1.2	67	30.921
ENSSDUG00000006543	RAB29	81	34.969	ENSSDUG00000013325	rab30	77	34.969

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000006543	RAB29	100	78.744	ENSATEG00000024739	RAB29	100	78.744	Anabas_testudineus
ENSSDUG00000006543	RAB29	81	87.654	ENSACLG00000008602	RAB29	98	87.654	Astatotilapia_calliptera
ENSSDUG00000006543	RAB29	100	71.014	ENSCVAG00000014038	RAB29	100	71.014	Cyprinodon_variegatus
ENSSDUG00000006543	RAB29	97	52.500	ENSEBUG00000002259	RAB29	96	52.500	Eptatretus_burgeri
ENSSDUG00000006543	RAB29	81	77.160	ENSFHEG00000015993	RAB29	79	77.160	Fundulus_heteroclitus
ENSSDUG00000006543	RAB29	82	78.659	ENSGMOG00000018475	RAB29	99	78.659	Gadus_morhua
ENSSDUG00000006543	RAB29	100	71.014	ENSGAFG00000000629	RAB29	100	71.014	Gambusia_affinis
ENSSDUG00000006543	RAB29	100	74.879	ENSGACG00000010473	RAB29	99	74.879	Gasterosteus_aculeatus
ENSSDUG00000006543	RAB29	100	76.442	ENSHBUG00000012594	RAB29	100	76.442	Haplochromis_burtoni
ENSSDUG00000006543	RAB29	97	70.936	ENSKMAG00000017150	-	91	70.936	Kryptolebias_marmoratus
ENSSDUG00000006543	RAB29	100	79.227	ENSLBEG00000006152	-	100	79.227	Labrus_bergylta
ENSSDUG00000006543	RAB29	100	79.227	ENSLBEG00000018812	RAB29	100	79.227	Labrus_bergylta
ENSSDUG00000006543	RAB29	99	52.451	ENSLACG00000002523	RAB29	98	52.451	Latimeria_chalumnae
ENSSDUG00000006543	RAB29	100	76.329	ENSMAMG00000006963	RAB29	100	76.329	Mastacembelus_armatus
ENSSDUG00000006543	RAB29	100	76.923	ENSMZEG00005026799	RAB29	100	76.923	Maylandia_zebra
ENSSDUG00000006543	RAB29	100	78.261	ENSMALG00000018436	RAB29	90	78.261	Monopterus_albus
ENSSDUG00000006543	RAB29	83	86.061	ENSNBRG00000008714	RAB29	72	86.061	Neolamprologus_brichardi
ENSSDUG00000006543	RAB29	100	76.442	ENSONIG00000014892	RAB29	100	76.442	Oreochromis_niloticus
ENSSDUG00000006543	RAB29	100	70.531	ENSORLG00000027892	RAB29	100	70.531	Oryzias_latipes
ENSSDUG00000006543	RAB29	100	68.116	ENSORLG00020005240	RAB29	100	68.116	Oryzias_latipes_hni
ENSSDUG00000006543	RAB29	100	69.565	ENSORLG00015020441	-	100	69.565	Oryzias_latipes_hsok
ENSSDUG00000006543	RAB29	100	71.359	ENSOMEG00000000336	RAB29	100	71.359	Oryzias_melastigma
ENSSDUG00000006543	RAB29	100	64.677	ENSPMGG00000008290	-	100	64.677	Periophthalmus_magnuspinnatus
ENSSDUG00000006543	RAB29	100	67.633	ENSPFOG00000013066	RAB29	99	67.633	Poecilia_formosa
ENSSDUG00000006543	RAB29	98	66.176	ENSPLAG00000002600	RAB29	95	66.176	Poecilia_latipinna
ENSSDUG00000006543	RAB29	100	68.599	ENSPMEG00000021807	RAB29	100	68.599	Poecilia_mexicana
ENSSDUG00000006543	RAB29	100	69.082	ENSPREG00000020276	RAB29	100	69.082	Poecilia_reticulata
ENSSDUG00000006543	RAB29	100	76.923	ENSPNYG00000015355	RAB29	100	76.923	Pundamilia_nyererei
ENSSDUG00000006543	RAB29	83	58.788	ENSSPUG00000015007	RAB29	81	58.788	Sphenodon_punctatus
ENSSDUG00000006543	RAB29	100	73.430	ENSSPAG00000002062	RAB29	100	73.430	Stegastes_partitus
ENSSDUG00000006543	RAB29	100	70.531	ENSXCOG00000016370	RAB29	100	70.531	Xiphophorus_couchianus
ENSSDUG00000006543	RAB29	100	71.014	ENSXMAG00000029823	RAB29	100	71.014	Xiphophorus_maculatus