EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000006549 (Gene tree)
Gene ID: 111236790
Gene Symbol: ccdc12
Alias: zgc:101038
Full Name: coiled-coil domain containing 12
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 7395 bases
Position: chrBDQW01000723.1:233910-241304
Accession: 111236790
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000009012	cwf18	PF08315.12	5.1e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000009188	-	492	XM_022765650	ENSSDUP00000009012	163 (aa)	XP_022621371	-

Gene Model

Click here to download ENSSDUG00000006549's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000006549's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000006549	ccdc12	96	68.987	ENSG00000160799	CCDC12	89	71.141	Homo_sapiens
ENSSDUG00000006549	ccdc12	100	89.571	ENSAPOG00000014426	ccdc12	60	89.571	Acanthochromis_polyacanthus
ENSSDUG00000006549	ccdc12	96	70.253	ENSAMEG00000012658	CCDC12	94	70.253	Ailuropoda_melanoleuca
ENSSDUG00000006549	ccdc12	69	96.429	ENSACIG00000015192	ccdc12	78	96.330	Amphilophus_citrinellus
ENSSDUG00000006549	ccdc12	75	95.082	ENSACIG00000022676	-	87	95.082	Amphilophus_citrinellus
ENSSDUG00000006549	ccdc12	96	92.357	ENSAOCG00000024127	ccdc12	94	92.357	Amphiprion_ocellaris
ENSSDUG00000006549	ccdc12	100	89.571	ENSAPEG00000009155	ccdc12	86	89.571	Amphiprion_percula
ENSSDUG00000006549	ccdc12	82	95.522	ENSATEG00000004807	ccdc12	100	95.522	Anabas_testudineus
ENSSDUG00000006549	ccdc12	79	73.846	ENSAPLG00000005482	CCDC12	80	79.817	Anas_platyrhynchos
ENSSDUG00000006549	ccdc12	96	73.292	ENSACAG00000004727	CCDC12	83	73.292	Anolis_carolinensis
ENSSDUG00000006549	ccdc12	82	70.149	ENSANAG00000024483	CCDC12	100	70.149	Aotus_nancymaae
ENSSDUG00000006549	ccdc12	100	87.117	ENSACLG00000005356	ccdc12	100	87.117	Astatotilapia_calliptera
ENSSDUG00000006549	ccdc12	94	79.221	ENSACLG00000012742	-	95	79.221	Astatotilapia_calliptera
ENSSDUG00000006549	ccdc12	100	80.982	ENSAMXG00000016319	ccdc12	100	80.982	Astyanax_mexicanus
ENSSDUG00000006549	ccdc12	87	72.535	ENSBTAG00000011311	CCDC12	94	68.750	Bos_taurus
ENSSDUG00000006549	ccdc12	83	39.855	WBGene00022092	Y69A2AR.21	90	36.076	Caenorhabditis_elegans
ENSSDUG00000006549	ccdc12	96	68.987	ENSCJAG00000002280	CCDC12	94	68.987	Callithrix_jacchus
ENSSDUG00000006549	ccdc12	96	70.253	ENSCAFG00000013588	CCDC12	94	70.253	Canis_familiaris
ENSSDUG00000006549	ccdc12	96	70.253	ENSCAFG00020014024	CCDC12	87	70.253	Canis_lupus_dingo
ENSSDUG00000006549	ccdc12	87	72.535	ENSCHIG00000014512	CCDC12	94	68.750	Capra_hircus
ENSSDUG00000006549	ccdc12	96	69.620	ENSTSYG00000032837	CCDC12	94	69.620	Carlito_syrichta
ENSSDUG00000006549	ccdc12	96	70.253	ENSCPOG00000032515	CCDC12	94	70.253	Cavia_porcellus
ENSSDUG00000006549	ccdc12	96	68.987	ENSCCAG00000020126	CCDC12	87	68.987	Cebus_capucinus
ENSSDUG00000006549	ccdc12	96	57.595	ENSCATG00000033681	CCDC12	86	54.491	Cercocebus_atys
ENSSDUG00000006549	ccdc12	96	70.253	ENSCLAG00000016013	CCDC12	94	70.253	Chinchilla_lanigera
ENSSDUG00000006549	ccdc12	96	68.354	ENSCSAG00000016154	CCDC12	87	68.354	Chlorocebus_sabaeus
ENSSDUG00000006549	ccdc12	96	71.069	ENSCPBG00000015804	CCDC12	75	71.338	Chrysemys_picta_bellii
ENSSDUG00000006549	ccdc12	91	51.678	ENSCING00000005261	-	87	51.007	Ciona_intestinalis
ENSSDUG00000006549	ccdc12	96	68.354	ENSCANG00000020857	CCDC12	82	70.470	Colobus_angolensis_palliatus
ENSSDUG00000006549	ccdc12	96	69.620	ENSCGRG00001000459	Ccdc12	94	69.620	Cricetulus_griseus_chok1gshd
ENSSDUG00000006549	ccdc12	96	69.620	ENSCGRG00000012816	Ccdc12	94	69.620	Cricetulus_griseus_crigri
ENSSDUG00000006549	ccdc12	100	88.344	ENSCSEG00000004543	ccdc12	100	88.344	Cynoglossus_semilaevis
ENSSDUG00000006549	ccdc12	82	96.269	ENSCVAG00000011342	ccdc12	100	96.269	Cyprinodon_variegatus
ENSSDUG00000006549	ccdc12	100	84.756	ENSDARG00000023003	ccdc12	100	83.436	Danio_rerio
ENSSDUG00000006549	ccdc12	96	63.057	ENSDORG00000024399	-	94	63.057	Dipodomys_ordii
ENSSDUG00000006549	ccdc12	88	71.034	ENSDORG00000016567	-	94	70.064	Dipodomys_ordii
ENSSDUG00000006549	ccdc12	95	41.026	FBgn0039732	CG15525	89	41.026	Drosophila_melanogaster
ENSSDUG00000006549	ccdc12	64	65.714	ENSETEG00000000030	CCDC12	91	65.714	Echinops_telfairi
ENSSDUG00000006549	ccdc12	100	57.317	ENSEBUG00000005674	ccdc12	100	57.317	Eptatretus_burgeri
ENSSDUG00000006549	ccdc12	96	69.620	ENSEASG00005008148	-	65	69.620	Equus_asinus_asinus
ENSSDUG00000006549	ccdc12	96	63.924	ENSECAG00000008649	CCDC12	94	63.924	Equus_caballus
ENSSDUG00000006549	ccdc12	100	81.212	ENSELUG00000024105	ccdc12	100	81.212	Esox_lucius
ENSSDUG00000006549	ccdc12	96	69.620	ENSFCAG00000015474	CCDC12	94	69.620	Felis_catus
ENSSDUG00000006549	ccdc12	96	62.893	ENSFALG00000001895	CCDC12	98	62.893	Ficedula_albicollis
ENSSDUG00000006549	ccdc12	96	70.253	ENSFDAG00000002549	CCDC12	95	70.253	Fukomys_damarensis
ENSSDUG00000006549	ccdc12	100	89.571	ENSFHEG00000016247	ccdc12	93	89.571	Fundulus_heteroclitus
ENSSDUG00000006549	ccdc12	100	73.006	ENSGMOG00000016901	ccdc12	100	73.006	Gadus_morhua
ENSSDUG00000006549	ccdc12	100	88.344	ENSGAFG00000006762	ccdc12	100	88.344	Gambusia_affinis
ENSSDUG00000006549	ccdc12	100	87.730	ENSGACG00000008629	ccdc12	100	87.730	Gasterosteus_aculeatus
ENSSDUG00000006549	ccdc12	96	71.698	ENSGAGG00000019688	CCDC12	93	70.701	Gopherus_agassizii
ENSSDUG00000006549	ccdc12	91	71.141	ENSGGOG00000009012	CCDC12	82	71.141	Gorilla_gorilla
ENSSDUG00000006549	ccdc12	100	87.117	ENSHBUG00000016447	ccdc12	100	87.117	Haplochromis_burtoni
ENSSDUG00000006549	ccdc12	96	70.253	ENSHGLG00000014058	CCDC12	94	70.253	Heterocephalus_glaber_female
ENSSDUG00000006549	ccdc12	96	70.253	ENSHGLG00100005918	CCDC12	94	70.253	Heterocephalus_glaber_male
ENSSDUG00000006549	ccdc12	100	85.366	ENSHCOG00000015164	ccdc12	100	85.366	Hippocampus_comes
ENSSDUG00000006549	ccdc12	100	79.878	ENSIPUG00000001310	Ccdc12	100	79.878	Ictalurus_punctatus
ENSSDUG00000006549	ccdc12	96	70.886	ENSSTOG00000003085	CCDC12	94	70.886	Ictidomys_tridecemlineatus
ENSSDUG00000006549	ccdc12	96	68.987	ENSJJAG00000014918	Ccdc12	94	68.987	Jaculus_jaculus
ENSSDUG00000006549	ccdc12	100	83.636	ENSKMAG00000013891	ccdc12	100	81.818	Kryptolebias_marmoratus
ENSSDUG00000006549	ccdc12	99	90.683	ENSLBEG00000024714	ccdc12	86	90.683	Labrus_bergylta
ENSSDUG00000006549	ccdc12	100	79.755	ENSLOCG00000005683	ccdc12	92	79.755	Lepisosteus_oculatus
ENSSDUG00000006549	ccdc12	96	67.516	ENSLAFG00000027745	-	96	67.516	Loxodonta_africana
ENSSDUG00000006549	ccdc12	69	76.991	ENSLAFG00000022573	-	96	77.273	Loxodonta_africana
ENSSDUG00000006549	ccdc12	96	68.354	ENSMFAG00000002976	CCDC12	87	68.354	Macaca_fascicularis
ENSSDUG00000006549	ccdc12	96	68.354	ENSMMUG00000019810	CCDC12	87	68.354	Macaca_mulatta
ENSSDUG00000006549	ccdc12	96	68.354	ENSMNEG00000035785	CCDC12	87	68.354	Macaca_nemestrina
ENSSDUG00000006549	ccdc12	96	68.354	ENSMLEG00000038060	CCDC12	87	68.354	Mandrillus_leucophaeus
ENSSDUG00000006549	ccdc12	100	92.025	ENSMAMG00000012165	ccdc12	100	92.025	Mastacembelus_armatus
ENSSDUG00000006549	ccdc12	100	87.730	ENSMZEG00005014728	ccdc12	100	87.730	Maylandia_zebra
ENSSDUG00000006549	ccdc12	94	79.870	ENSMZEG00005019013	-	95	79.870	Maylandia_zebra
ENSSDUG00000006549	ccdc12	84	71.014	ENSMGAG00000002815	CCDC12	89	68.153	Meleagris_gallopavo
ENSSDUG00000006549	ccdc12	96	68.354	ENSMAUG00000008879	Ccdc12	94	68.354	Mesocricetus_auratus
ENSSDUG00000006549	ccdc12	96	68.553	ENSMICG00000032886	CCDC12	94	69.182	Microcebus_murinus
ENSSDUG00000006549	ccdc12	96	68.987	ENSMOCG00000004483	Ccdc12	94	68.987	Microtus_ochrogaster
ENSSDUG00000006549	ccdc12	68	92.793	ENSMMOG00000001860	ccdc12	75	93.578	Mola_mola
ENSSDUG00000006549	ccdc12	96	64.780	ENSMODG00000025021	-	94	64.331	Monodelphis_domestica
ENSSDUG00000006549	ccdc12	96	62.893	ENSMODG00000022615	-	94	62.420	Monodelphis_domestica
ENSSDUG00000006549	ccdc12	96	72.327	ENSMODG00000013967	-	94	72.327	Monodelphis_domestica
ENSSDUG00000006549	ccdc12	100	90.798	ENSMALG00000011850	ccdc12	100	90.798	Monopterus_albus
ENSSDUG00000006549	ccdc12	96	69.620	MGP_CAROLIEiJ_G0032737	-	94	69.620	Mus_caroli
ENSSDUG00000006549	ccdc12	96	70.000	ENSMUSG00000019659	Ccdc12	94	68.987	Mus_musculus
ENSSDUG00000006549	ccdc12	96	69.620	MGP_PahariEiJ_G0015604	Ccdc12	94	69.620	Mus_pahari
ENSSDUG00000006549	ccdc12	96	70.000	MGP_SPRETEiJ_G0033885	Ccdc12	94	68.987	Mus_spretus
ENSSDUG00000006549	ccdc12	96	67.089	ENSMLUG00000009547	CCDC12	92	70.161	Myotis_lucifugus
ENSSDUG00000006549	ccdc12	96	69.620	ENSNGAG00000004149	Ccdc12	94	69.620	Nannospalax_galili
ENSSDUG00000006549	ccdc12	100	76.608	ENSNBRG00000015275	ccdc12	100	75.439	Neolamprologus_brichardi
ENSSDUG00000006549	ccdc12	96	68.987	ENSNLEG00000006219	CCDC12	94	68.987	Nomascus_leucogenys
ENSSDUG00000006549	ccdc12	91	68.456	ENSOPRG00000005086	CCDC12	89	68.456	Ochotona_princeps
ENSSDUG00000006549	ccdc12	96	70.253	ENSODEG00000012202	CCDC12	94	70.253	Octodon_degus
ENSSDUG00000006549	ccdc12	100	87.730	ENSONIG00000003061	ccdc12	100	87.730	Oreochromis_niloticus
ENSSDUG00000006549	ccdc12	81	74.436	ENSOANG00000004263	-	92	71.642	Ornithorhynchus_anatinus
ENSSDUG00000006549	ccdc12	96	69.620	ENSOCUG00000012431	CCDC12	80	69.620	Oryctolagus_cuniculus
ENSSDUG00000006549	ccdc12	100	84.848	ENSORLG00000008126	ccdc12	100	84.848	Oryzias_latipes
ENSSDUG00000006549	ccdc12	100	88.344	ENSORLG00020013927	ccdc12	100	88.344	Oryzias_latipes_hni
ENSSDUG00000006549	ccdc12	100	88.344	ENSORLG00015020115	ccdc12	100	88.344	Oryzias_latipes_hsok
ENSSDUG00000006549	ccdc12	100	89.571	ENSOMEG00000014082	ccdc12	100	89.571	Oryzias_melastigma
ENSSDUG00000006549	ccdc12	100	89.571	ENSOMEG00000022304	ccdc12	100	89.571	Oryzias_melastigma
ENSSDUG00000006549	ccdc12	68	75.000	ENSOGAG00000016807	CCDC12	98	74.545	Otolemur_garnettii
ENSSDUG00000006549	ccdc12	73	73.950	ENSOARG00000006426	CCDC12	100	69.343	Ovis_aries
ENSSDUG00000006549	ccdc12	91	71.141	ENSPPAG00000028782	CCDC12	82	71.141	Pan_paniscus
ENSSDUG00000006549	ccdc12	96	69.620	ENSPPRG00000013547	CCDC12	94	69.620	Panthera_pardus
ENSSDUG00000006549	ccdc12	96	69.620	ENSPTIG00000014875	CCDC12	90	69.620	Panthera_tigris_altaica
ENSSDUG00000006549	ccdc12	91	71.141	ENSPTRG00000014862	CCDC12	82	71.141	Pan_troglodytes
ENSSDUG00000006549	ccdc12	96	68.354	ENSPANG00000017485	CCDC12	89	68.354	Papio_anubis
ENSSDUG00000006549	ccdc12	100	74.390	ENSPKIG00000019130	ccdc12	100	77.439	Paramormyrops_kingsleyae
ENSSDUG00000006549	ccdc12	68	85.586	ENSPSIG00000010867	CCDC12	98	85.321	Pelodiscus_sinensis
ENSSDUG00000006549	ccdc12	100	86.503	ENSPMGG00000012211	ccdc12	100	86.503	Periophthalmus_magnuspinnatus
ENSSDUG00000006549	ccdc12	96	55.696	ENSPEMG00000001376	-	94	55.696	Peromyscus_maniculatus_bairdii
ENSSDUG00000006549	ccdc12	96	69.620	ENSPEMG00000022196	-	94	69.620	Peromyscus_maniculatus_bairdii
ENSSDUG00000006549	ccdc12	96	71.975	ENSPMAG00000000005	ccdc12	92	70.701	Petromyzon_marinus
ENSSDUG00000006549	ccdc12	96	72.611	ENSPCIG00000025941	CCDC12	94	72.611	Phascolarctos_cinereus
ENSSDUG00000006549	ccdc12	88	89.583	ENSPFOG00000000343	ccdc12	100	89.571	Poecilia_formosa
ENSSDUG00000006549	ccdc12	100	89.571	ENSPLAG00000019010	ccdc12	100	89.571	Poecilia_latipinna
ENSSDUG00000006549	ccdc12	88	89.583	ENSPMEG00000022371	ccdc12	81	89.571	Poecilia_mexicana
ENSSDUG00000006549	ccdc12	100	90.184	ENSPREG00000020932	ccdc12	81	90.184	Poecilia_reticulata
ENSSDUG00000006549	ccdc12	96	68.987	ENSPPYG00000013924	CCDC12	77	68.987	Pongo_abelii
ENSSDUG00000006549	ccdc12	96	69.620	ENSPCAG00000005800	CCDC12	94	69.620	Procavia_capensis
ENSSDUG00000006549	ccdc12	100	66.272	ENSPCOG00000018682	CCDC12	93	66.272	Propithecus_coquereli
ENSSDUG00000006549	ccdc12	96	69.620	ENSPVAG00000004204	CCDC12	94	69.620	Pteropus_vampyrus
ENSSDUG00000006549	ccdc12	100	87.730	ENSPNYG00000016295	ccdc12	100	87.730	Pundamilia_nyererei
ENSSDUG00000006549	ccdc12	100	64.024	ENSPNAG00000028558	ccdc12	88	94.495	Pygocentrus_nattereri
ENSSDUG00000006549	ccdc12	96	69.620	ENSRNOG00000020946	Ccdc12	94	69.620	Rattus_norvegicus
ENSSDUG00000006549	ccdc12	91	70.470	ENSRBIG00000039910	CCDC12	82	70.470	Rhinopithecus_bieti
ENSSDUG00000006549	ccdc12	96	68.354	ENSRROG00000039721	CCDC12	94	68.354	Rhinopithecus_roxellana
ENSSDUG00000006549	ccdc12	96	68.987	ENSSBOG00000035443	CCDC12	87	68.987	Saimiri_boliviensis_boliviensis
ENSSDUG00000006549	ccdc12	96	70.513	ENSSHAG00000003265	-	94	70.513	Sarcophilus_harrisii
ENSSDUG00000006549	ccdc12	100	76.829	ENSSFOG00015001307	ccdc12	100	74.390	Scleropages_formosus
ENSSDUG00000006549	ccdc12	91	91.216	ENSSMAG00000019856	ccdc12	100	90.244	Scophthalmus_maximus
ENSSDUG00000006549	ccdc12	100	95.092	ENSSLDG00000015956	ccdc12	100	95.092	Seriola_lalandi_dorsalis
ENSSDUG00000006549	ccdc12	90	52.381	ENSSPUG00000013054	CCDC12	91	52.381	Sphenodon_punctatus
ENSSDUG00000006549	ccdc12	100	88.957	ENSSPAG00000007010	ccdc12	100	88.957	Stegastes_partitus
ENSSDUG00000006549	ccdc12	72	46.154	ENSSSCG00000007882	-	81	46.154	Sus_scrofa
ENSSDUG00000006549	ccdc12	96	69.427	ENSSSCG00000011329	-	94	69.427	Sus_scrofa
ENSSDUG00000006549	ccdc12	64	66.981	ENSTGUG00000000186	CCDC12	83	66.981	Taeniopygia_guttata
ENSSDUG00000006549	ccdc12	100	75.460	ENSTRUG00000014023	ccdc12	85	74.233	Takifugu_rubripes
ENSSDUG00000006549	ccdc12	100	80.982	ENSTNIG00000018407	ccdc12	98	80.982	Tetraodon_nigroviridis
ENSSDUG00000006549	ccdc12	96	46.541	ENSTBEG00000000048	CCDC12	94	46.541	Tupaia_belangeri
ENSSDUG00000006549	ccdc12	96	65.823	ENSTTRG00000015854	CCDC12	94	65.823	Tursiops_truncatus
ENSSDUG00000006549	ccdc12	96	63.924	ENSUAMG00000025548	CCDC12	90	74.242	Ursus_americanus
ENSSDUG00000006549	ccdc12	96	70.253	ENSUMAG00000004346	CCDC12	94	70.253	Ursus_maritimus
ENSSDUG00000006549	ccdc12	64	59.048	ENSVPAG00000000070	-	91	58.095	Vicugna_pacos
ENSSDUG00000006549	ccdc12	96	70.253	ENSVVUG00000004582	CCDC12	94	70.253	Vulpes_vulpes
ENSSDUG00000006549	ccdc12	82	74.627	ENSXETG00000013123	ccdc12	82	80.734	Xenopus_tropicalis
ENSSDUG00000006549	ccdc12	100	88.957	ENSXCOG00000019741	ccdc12	100	88.957	Xiphophorus_couchianus
ENSSDUG00000006549	ccdc12	100	88.957	ENSXMAG00000014098	ccdc12	81	88.957	Xiphophorus_maculatus