EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000006564 (Gene tree)
Gene ID: 111227098
Gene Symbol: rabl6b
Alias: si:ch211-102c2.5
Full Name: RAB%2C member RAS oncogene family like 6
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 15193 bases
Position: chrBDQW01000017.1:12367682-12382874
Accession: 111227098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000008941	MMR_HSR1	PF01926.23	7.9e-05	1	1
ENSSDUP00000008985	MMR_HSR1	PF01926.23	9.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000009161	-	2145	-	ENSSDUP00000008985	714 (aa)	-	-
ENSSDUT00000009117	-	2263	XM_022752501	ENSSDUP00000008941	747 (aa)	XP_022608222	-

Gene Model

Click here to download ENSSDUG00000006564's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000006564's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000006564	rabl6b	100	81.604	ENSACIG00000010721	rabl6b	100	80.507	Amphilophus_citrinellus
ENSSDUG00000006564	rabl6b	100	87.067	ENSATEG00000012055	rabl6b	100	87.200	Anabas_testudineus
ENSSDUG00000006564	rabl6b	100	74.185	ENSCSEG00000012430	-	94	81.222	Cynoglossus_semilaevis
ENSSDUG00000006564	rabl6b	100	79.921	ENSCSEG00000016135	rabl6b	100	80.052	Cynoglossus_semilaevis
ENSSDUG00000006564	rabl6b	100	67.179	ENSELUG00000004448	rabl6b	100	67.871	Esox_lucius
ENSSDUG00000006564	rabl6b	100	78.238	ENSGAFG00000013561	rabl6b	100	79.916	Gambusia_affinis
ENSSDUG00000006564	rabl6b	100	81.275	ENSGACG00000005242	rabl6b	100	81.275	Gasterosteus_aculeatus
ENSSDUG00000006564	rabl6b	100	87.867	ENSHBUG00000014235	rabl6b	100	88.133	Haplochromis_burtoni
ENSSDUG00000006564	rabl6b	100	64.820	ENSIPUG00000019266	rabl6	100	65.677	Ictalurus_punctatus
ENSSDUG00000006564	rabl6b	84	58.514	ENSLOCG00000001402	rabl6b	94	60.635	Lepisosteus_oculatus
ENSSDUG00000006564	rabl6b	100	86.382	ENSMAMG00000019516	rabl6b	100	85.695	Mastacembelus_armatus
ENSSDUG00000006564	rabl6b	63	78.556	ENSMZEG00005003942	rabl6b	99	78.993	Maylandia_zebra
ENSSDUG00000006564	rabl6b	63	76.484	ENSMMOG00000009459	rabl6b	97	75.658	Mola_mola
ENSSDUG00000006564	rabl6b	100	89.052	ENSMALG00000002029	rabl6b	100	89.186	Monopterus_albus
ENSSDUG00000006564	rabl6b	63	79.650	ENSNBRG00000012512	rabl6b	99	79.869	Neolamprologus_brichardi
ENSSDUG00000006564	rabl6b	100	86.916	ENSONIG00000010408	rabl6b	100	86.515	Oreochromis_niloticus
ENSSDUG00000006564	rabl6b	100	78.864	ENSORLG00020017557	rabl6b	100	78.336	Oryzias_latipes_hni
ENSSDUG00000006564	rabl6b	89	79.228	ENSORLG00015007848	rabl6b	91	79.910	Oryzias_latipes_hsok
ENSSDUG00000006564	rabl6b	89	81.777	ENSOMEG00000022840	rabl6b	95	81.818	Oryzias_melastigma
ENSSDUG00000006564	rabl6b	100	61.954	ENSPKIG00000007459	RABL6	100	60.931	Paramormyrops_kingsleyae
ENSSDUG00000006564	rabl6b	90	60.333	ENSPCIG00000023722	RABL6	90	59.490	Phascolarctos_cinereus
ENSSDUG00000006564	rabl6b	100	85.180	ENSPFOG00000003250	rabl6b	100	83.979	Poecilia_formosa
ENSSDUG00000006564	rabl6b	100	85.047	ENSPLAG00000019562	rabl6b	100	83.845	Poecilia_latipinna
ENSSDUG00000006564	rabl6b	100	85.314	ENSPMEG00000020472	rabl6b	100	85.581	Poecilia_mexicana
ENSSDUG00000006564	rabl6b	90	86.053	ENSPREG00000014116	rabl6b	93	87.121	Poecilia_reticulata
ENSSDUG00000006564	rabl6b	100	63.526	ENSSFOG00015017388	RABL6	100	65.680	Scleropages_formosus
ENSSDUG00000006564	rabl6b	99	63.696	ENSSFOG00015013414	-	99	62.803	Scleropages_formosus
ENSSDUG00000006564	rabl6b	88	92.857	ENSSMAG00000012543	rabl6b	95	92.857	Scophthalmus_maximus
ENSSDUG00000006564	rabl6b	100	85.773	ENSSPAG00000021033	rabl6b	95	91.364	Stegastes_partitus
ENSSDUG00000006564	rabl6b	99	74.177	ENSTNIG00000010595	rabl6b	100	73.781	Tetraodon_nigroviridis