EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000006583 (Gene tree)
Gene ID: 111222640
Gene Symbol: gpatch4
Alias: im:7138553|si:dkey-202i12.4
Full Name: G-patch domain containing 4
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 3329 bases
Position: chrBDQW01000104.1:578776-582104
Accession: 111222640
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000008951	G-patch	PF01585.23	1.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000009126	-	1209	XM_022746435	ENSSDUP00000008951	402 (aa)	XP_022602156	UPI000BBF24F6

Gene Model

Click here to download ENSSDUG00000006583's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000006583's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000006583	gpatch4	98	65.796	ENSAPOG00000008436	gpatch4	99	64.953	Acanthochromis_polyacanthus
ENSSDUG00000006583	gpatch4	76	97.222	ENSAOCG00000015494	gpatch4	96	97.222	Amphiprion_ocellaris
ENSSDUG00000006583	gpatch4	98	68.171	ENSAPEG00000022243	gpatch4	99	64.434	Amphiprion_percula
ENSSDUG00000006583	gpatch4	92	73.383	ENSATEG00000006359	gpatch4	99	69.752	Anabas_testudineus
ENSSDUG00000006583	gpatch4	79	71.988	ENSACLG00000010456	gpatch4	83	71.386	Astatotilapia_calliptera
ENSSDUG00000006583	gpatch4	52	44.286	ENSCJAG00000006048	GPATCH4	66	55.556	Callithrix_jacchus
ENSSDUG00000006583	gpatch4	52	44.762	ENSCCAG00000036114	GPATCH4	66	55.556	Cebus_capucinus
ENSSDUG00000006583	gpatch4	50	61.000	ENSCPBG00000025803	GPATCH4	63	61.500	Chrysemys_picta_bellii
ENSSDUG00000006583	gpatch4	52	45.714	ENSCANG00000030031	GPATCH4	57	55.556	Colobus_angolensis_palliatus
ENSSDUG00000006583	gpatch4	79	56.061	ENSCSEG00000012030	gpatch4	58	68.599	Cynoglossus_semilaevis
ENSSDUG00000006583	gpatch4	55	76.126	ENSDARG00000091931	gpatch4	82	77.019	Danio_rerio
ENSSDUG00000006583	gpatch4	50	47.291	ENSECAG00000011135	GPATCH4	54	45.545	Equus_caballus
ENSSDUG00000006583	gpatch4	59	73.745	ENSFHEG00000003097	gpatch4	66	72.374	Fundulus_heteroclitus
ENSSDUG00000006583	gpatch4	50	50.000	ENSGALG00000048365	GPATCH4	51	52.604	Gallus_gallus
ENSSDUG00000006583	gpatch4	53	76.526	ENSGAFG00000021732	gpatch4	65	76.812	Gambusia_affinis
ENSSDUG00000006583	gpatch4	92	63.172	ENSGACG00000013318	gpatch4	99	62.331	Gasterosteus_aculeatus
ENSSDUG00000006583	gpatch4	51	61.353	ENSGAGG00000020710	GPATCH4	63	63.317	Gopherus_agassizii
ENSSDUG00000006583	gpatch4	51	46.377	ENSGGOG00000000753	GPATCH4	57	55.556	Gorilla_gorilla
ENSSDUG00000006583	gpatch4	79	72.289	ENSHBUG00000009675	gpatch4	82	71.386	Haplochromis_burtoni
ENSSDUG00000006583	gpatch4	98	50.000	ENSHCOG00000007016	gpatch4	67	66.803	Hippocampus_comes
ENSSDUG00000006583	gpatch4	52	75.120	ENSIPUG00000006348	gpatch4	65	68.932	Ictalurus_punctatus
ENSSDUG00000006583	gpatch4	53	45.872	ENSSTOG00000020510	GPATCH4	89	45.669	Ictidomys_tridecemlineatus
ENSSDUG00000006583	gpatch4	99	57.447	ENSKMAG00000015765	gpatch4	55	88.889	Kryptolebias_marmoratus
ENSSDUG00000006583	gpatch4	98	71.463	ENSLBEG00000009364	-	94	84.653	Labrus_bergylta
ENSSDUG00000006583	gpatch4	98	67.955	ENSLBEG00000016296	gpatch4	99	67.785	Labrus_bergylta
ENSSDUG00000006583	gpatch4	53	63.380	ENSLACG00000009700	GPATCH4	57	62.621	Latimeria_chalumnae
ENSSDUG00000006583	gpatch4	53	62.780	ENSLOCG00000008820	gpatch4	59	63.256	Lepisosteus_oculatus
ENSSDUG00000006583	gpatch4	52	44.286	ENSMMUG00000002624	GPATCH4	85	40.909	Macaca_mulatta
ENSSDUG00000006583	gpatch4	52	44.286	ENSMNEG00000028844	GPATCH4	85	40.909	Macaca_nemestrina
ENSSDUG00000006583	gpatch4	52	44.286	ENSMLEG00000037909	GPATCH4	85	41.985	Mandrillus_leucophaeus
ENSSDUG00000006583	gpatch4	97	65.574	ENSMAMG00000010151	gpatch4	99	64.665	Mastacembelus_armatus
ENSSDUG00000006583	gpatch4	79	71.903	ENSMZEG00005017452	gpatch4	82	71.601	Maylandia_zebra
ENSSDUG00000006583	gpatch4	74	97.333	ENSMMOG00000017095	gpatch4	69	97.333	Mola_mola
ENSSDUG00000006583	gpatch4	51	49.510	ENSMODG00000016818	-	66	48.039	Monodelphis_domestica
ENSSDUG00000006583	gpatch4	51	48.039	ENSMODG00000014154	-	92	47.549	Monodelphis_domestica
ENSSDUG00000006583	gpatch4	99	66.820	ENSMALG00000003793	gpatch4	99	65.668	Monopterus_albus
ENSSDUG00000006583	gpatch4	53	47.032	MGP_CAROLIEiJ_G0025152	Gpatch4	77	44.608	Mus_caroli
ENSSDUG00000006583	gpatch4	53	46.119	ENSMUSG00000028069	Gpatch4	77	44.608	Mus_musculus
ENSSDUG00000006583	gpatch4	53	47.032	MGP_PahariEiJ_G0026595	-	77	44.608	Mus_pahari
ENSSDUG00000006583	gpatch4	53	46.119	MGP_SPRETEiJ_G0026093	Gpatch4	77	44.608	Mus_spretus
ENSSDUG00000006583	gpatch4	51	45.098	ENSMPUG00000004136	-	65	32.566	Mustela_putorius_furo
ENSSDUG00000006583	gpatch4	99	66.667	ENSONIG00000002261	gpatch4	99	65.375	Oreochromis_niloticus
ENSSDUG00000006583	gpatch4	78	63.462	ENSORLG00020013892	gpatch4	56	82.266	Oryzias_latipes_hni
ENSSDUG00000006583	gpatch4	51	82.039	ENSORLG00015019725	gpatch4	56	81.773	Oryzias_latipes_hsok
ENSSDUG00000006583	gpatch4	50	47.291	ENSPTIG00000006717	GPATCH4	84	44.882	Panthera_tigris_altaica
ENSSDUG00000006583	gpatch4	52	44.286	ENSPANG00000018543	GPATCH4	85	40.909	Papio_anubis
ENSSDUG00000006583	gpatch4	53	59.434	ENSPSIG00000011317	GPATCH4	69	61.275	Pelodiscus_sinensis
ENSSDUG00000006583	gpatch4	52	55.660	ENSPMAG00000009175	gpatch4	69	56.863	Petromyzon_marinus
ENSSDUG00000006583	gpatch4	98	55.288	ENSPFOG00000011835	gpatch4	53	80.288	Poecilia_formosa
ENSSDUG00000006583	gpatch4	98	55.181	ENSPLAG00000019504	gpatch4	53	80.288	Poecilia_latipinna
ENSSDUG00000006583	gpatch4	99	55.924	ENSPMEG00000001375	gpatch4	54	80.288	Poecilia_mexicana
ENSSDUG00000006583	gpatch4	93	56.219	ENSPREG00000017029	gpatch4	56	78.846	Poecilia_reticulata
ENSSDUG00000006583	gpatch4	79	72.289	ENSPNYG00000018461	gpatch4	83	71.687	Pundamilia_nyererei
ENSSDUG00000006583	gpatch4	67	43.494	ENSSHAG00000015436	-	67	47.059	Sarcophilus_harrisii
ENSSDUG00000006583	gpatch4	98	72.311	ENSSMAG00000016329	gpatch4	99	72.523	Scophthalmus_maximus
ENSSDUG00000006583	gpatch4	100	98.010	ENSSLDG00000012365	gpatch4	100	98.010	Seriola_lalandi_dorsalis
ENSSDUG00000006583	gpatch4	53	57.674	ENSSPUG00000002674	GPATCH4	66	59.804	Sphenodon_punctatus
ENSSDUG00000006583	gpatch4	97	67.064	ENSSPAG00000011683	gpatch4	99	67.366	Stegastes_partitus
ENSSDUG00000006583	gpatch4	50	77.561	ENSTNIG00000005156	gpatch4	70	78.049	Tetraodon_nigroviridis
ENSSDUG00000006583	gpatch4	51	40.773	ENSVVUG00000006004	-	82	47.107	Vulpes_vulpes
ENSSDUG00000006583	gpatch4	57	59.072	ENSXETG00000020397	gpatch4	78	57.613	Xenopus_tropicalis
ENSSDUG00000006583	gpatch4	99	53.717	ENSXCOG00000003911	gpatch4	54	77.778	Xiphophorus_couchianus
ENSSDUG00000006583	gpatch4	98	54.126	ENSXMAG00000024520	gpatch4	54	80.288	Xiphophorus_maculatus