EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000006590 (Gene tree)
Gene ID: 111229967
Gene Symbol: polr3c
Alias: zgc:56348
Full Name: RNA polymerase III subunit C
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 7984 bases
Position: chrBDQW01000258.1:616286-624269
Accession: 111229967
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000008980	RNA_pol_Rpc82	PF05645.13	7.9e-47	1	1
ENSSDUP00000009017	RNA_pol_Rpc82	PF05645.13	1.4e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000009155	-	2293	-	ENSSDUP00000008980	581 (aa)	-	-
ENSSDUT00000009194	-	1602	XM_022756478	ENSSDUP00000009017	533 (aa)	XP_022612199	-

Gene Model

Click here to download ENSSDUG00000006590's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03020	RNA polymerase	KEGG
sdu04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000006590's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000006590	polr3c	99	65.672	ENSG00000186141	POLR3C	99	65.672	Homo_sapiens
ENSSDUG00000006590	polr3c	99	91.360	ENSAPOG00000008722	polr3c	99	91.544	Acanthochromis_polyacanthus
ENSSDUG00000006590	polr3c	99	66.041	ENSAMEG00000017531	POLR3C	99	66.045	Ailuropoda_melanoleuca
ENSSDUG00000006590	polr3c	99	88.504	ENSACIG00000008064	polr3c	100	88.504	Amphilophus_citrinellus
ENSSDUG00000006590	polr3c	100	92.495	ENSAOCG00000011695	polr3c	100	92.495	Amphiprion_ocellaris
ENSSDUG00000006590	polr3c	100	92.683	ENSAPEG00000004426	polr3c	100	92.683	Amphiprion_percula
ENSSDUG00000006590	polr3c	99	90.370	ENSATEG00000023618	polr3c	92	91.111	Anabas_testudineus
ENSSDUG00000006590	polr3c	99	65.858	ENSANAG00000036434	POLR3C	99	65.858	Aotus_nancymaae
ENSSDUG00000006590	polr3c	99	88.117	ENSACLG00000019970	polr3c	100	88.117	Astatotilapia_calliptera
ENSSDUG00000006590	polr3c	99	76.667	ENSAMXG00000008273	polr3c	99	76.852	Astyanax_mexicanus
ENSSDUG00000006590	polr3c	99	66.729	ENSBTAG00000021637	POLR3C	99	66.729	Bos_taurus
ENSSDUG00000006590	polr3c	99	65.858	ENSCJAG00000002314	POLR3C	99	65.858	Callithrix_jacchus
ENSSDUG00000006590	polr3c	99	65.858	ENSCAFG00000011257	POLR3C	99	65.858	Canis_familiaris
ENSSDUG00000006590	polr3c	95	65.370	ENSCAFG00020020066	POLR3C	99	65.370	Canis_lupus_dingo
ENSSDUG00000006590	polr3c	99	66.542	ENSCHIG00000022431	POLR3C	99	66.542	Capra_hircus
ENSSDUG00000006590	polr3c	99	65.103	ENSTSYG00000002292	POLR3C	99	65.112	Carlito_syrichta
ENSSDUG00000006590	polr3c	95	50.586	ENSCAPG00000011559	POLR3C	100	50.586	Cavia_aperea
ENSSDUG00000006590	polr3c	99	64.860	ENSCPOG00000004654	POLR3C	99	64.860	Cavia_porcellus
ENSSDUG00000006590	polr3c	99	65.858	ENSCCAG00000027077	POLR3C	99	65.858	Cebus_capucinus
ENSSDUG00000006590	polr3c	99	65.485	ENSCATG00000040166	POLR3C	99	65.485	Cercocebus_atys
ENSSDUG00000006590	polr3c	87	73.469	ENSCLAG00000001652	POLR3C	99	73.469	Chinchilla_lanigera
ENSSDUG00000006590	polr3c	99	65.858	ENSCSAG00000001762	POLR3C	99	65.858	Chlorocebus_sabaeus
ENSSDUG00000006590	polr3c	99	63.977	ENSCHOG00000006911	POLR3C	99	63.993	Choloepus_hoffmanni
ENSSDUG00000006590	polr3c	99	66.231	ENSCPBG00000007883	POLR3C	99	66.355	Chrysemys_picta_bellii
ENSSDUG00000006590	polr3c	99	43.470	ENSCING00000007024	-	100	43.657	Ciona_intestinalis
ENSSDUG00000006590	polr3c	99	44.569	ENSCSAVG00000008586	-	99	44.569	Ciona_savignyi
ENSSDUG00000006590	polr3c	99	65.672	ENSCANG00000032538	POLR3C	99	65.672	Colobus_angolensis_palliatus
ENSSDUG00000006590	polr3c	99	66.165	ENSCGRG00001005471	Polr3c	99	66.105	Cricetulus_griseus_chok1gshd
ENSSDUG00000006590	polr3c	99	66.165	ENSCGRG00000016787	Polr3c	99	66.105	Cricetulus_griseus_crigri
ENSSDUG00000006590	polr3c	99	88.577	ENSCSEG00000002425	polr3c	98	88.951	Cynoglossus_semilaevis
ENSSDUG00000006590	polr3c	99	84.432	ENSCVAG00000009443	polr3c	100	85.219	Cyprinodon_variegatus
ENSSDUG00000006590	polr3c	99	84.432	ENSCVAG00000022458	polr3c	100	85.219	Cyprinodon_variegatus
ENSSDUG00000006590	polr3c	99	80.297	ENSDARG00000057562	polr3c	99	80.297	Danio_rerio
ENSSDUG00000006590	polr3c	70	67.895	ENSDNOG00000012149	POLR3C	99	67.885	Dasypus_novemcinctus
ENSSDUG00000006590	polr3c	99	65.356	ENSDORG00000013430	Polr3c	99	65.356	Dipodomys_ordii
ENSSDUG00000006590	polr3c	99	31.157	FBgn0038057	CG12267	98	31.157	Drosophila_melanogaster
ENSSDUG00000006590	polr3c	99	57.090	ENSETEG00000017696	POLR3C	99	57.143	Echinops_telfairi
ENSSDUG00000006590	polr3c	99	65.291	ENSEASG00005007417	POLR3C	99	65.299	Equus_asinus_asinus
ENSSDUG00000006590	polr3c	99	63.227	ENSECAG00000023713	POLR3C	99	63.246	Equus_caballus
ENSSDUG00000006590	polr3c	99	63.910	ENSEEUG00000011124	POLR3C	99	63.858	Erinaceus_europaeus
ENSSDUG00000006590	polr3c	99	82.746	ENSELUG00000013209	polr3c	99	83.117	Esox_lucius
ENSSDUG00000006590	polr3c	99	65.804	ENSFCAG00000013360	POLR3C	99	65.804	Felis_catus
ENSSDUG00000006590	polr3c	99	65.047	ENSFDAG00000021078	POLR3C	99	65.047	Fukomys_damarensis
ENSSDUG00000006590	polr3c	99	83.150	ENSFHEG00000000872	polr3c	100	84.489	Fundulus_heteroclitus
ENSSDUG00000006590	polr3c	99	80.952	ENSGMOG00000018937	polr3c	99	81.273	Gadus_morhua
ENSSDUG00000006590	polr3c	86	62.338	ENSGALG00000052515	-	100	62.851	Gallus_gallus
ENSSDUG00000006590	polr3c	99	84.615	ENSGAFG00000014721	polr3c	100	85.949	Gambusia_affinis
ENSSDUG00000006590	polr3c	99	91.729	ENSGACG00000011829	polr3c	100	91.729	Gasterosteus_aculeatus
ENSSDUG00000006590	polr3c	99	66.045	ENSGAGG00000010176	POLR3C	99	66.045	Gopherus_agassizii
ENSSDUG00000006590	polr3c	99	65.485	ENSGGOG00000007279	POLR3C	99	65.485	Gorilla_gorilla
ENSSDUG00000006590	polr3c	99	88.117	ENSHBUG00000003619	polr3c	100	88.117	Haplochromis_burtoni
ENSSDUG00000006590	polr3c	99	64.486	ENSHGLG00000014978	POLR3C	99	64.486	Heterocephalus_glaber_female
ENSSDUG00000006590	polr3c	99	64.486	ENSHGLG00100015620	POLR3C	99	64.486	Heterocephalus_glaber_male
ENSSDUG00000006590	polr3c	99	83.364	ENSHCOG00000000823	polr3c	99	83.364	Hippocampus_comes
ENSSDUG00000006590	polr3c	99	77.615	ENSIPUG00000008657	polr3c	99	78.532	Ictalurus_punctatus
ENSSDUG00000006590	polr3c	99	65.858	ENSSTOG00000014601	POLR3C	99	65.858	Ictidomys_tridecemlineatus
ENSSDUG00000006590	polr3c	99	66.041	ENSJJAG00000011447	Polr3c	99	66.041	Jaculus_jaculus
ENSSDUG00000006590	polr3c	99	84.715	ENSKMAG00000001574	polr3c	99	85.267	Kryptolebias_marmoratus
ENSSDUG00000006590	polr3c	99	90.459	ENSLBEG00000026567	polr3c	99	91.058	Labrus_bergylta
ENSSDUG00000006590	polr3c	99	65.478	ENSLACG00000017216	POLR3C	99	65.478	Latimeria_chalumnae
ENSSDUG00000006590	polr3c	99	65.250	ENSLOCG00000006400	polr3c	99	65.434	Lepisosteus_oculatus
ENSSDUG00000006590	polr3c	99	65.666	ENSLAFG00000029485	POLR3C	99	65.672	Loxodonta_africana
ENSSDUG00000006590	polr3c	99	65.672	ENSMFAG00000040338	POLR3C	99	65.672	Macaca_fascicularis
ENSSDUG00000006590	polr3c	99	65.672	ENSMMUG00000016735	POLR3C	99	65.672	Macaca_mulatta
ENSSDUG00000006590	polr3c	99	65.672	ENSMNEG00000040944	POLR3C	99	65.672	Macaca_nemestrina
ENSSDUG00000006590	polr3c	99	65.672	ENSMLEG00000031091	POLR3C	99	65.672	Mandrillus_leucophaeus
ENSSDUG00000006590	polr3c	99	89.011	ENSMAMG00000014770	polr3c	99	89.617	Mastacembelus_armatus
ENSSDUG00000006590	polr3c	99	86.837	ENSMZEG00005015882	polr3c	100	86.837	Maylandia_zebra
ENSSDUG00000006590	polr3c	77	55.924	ENSMAUG00000021521	-	98	55.924	Mesocricetus_auratus
ENSSDUG00000006590	polr3c	99	65.977	ENSMAUG00000001454	-	99	65.918	Mesocricetus_auratus
ENSSDUG00000006590	polr3c	99	66.418	ENSMICG00000034253	POLR3C	99	66.418	Microcebus_murinus
ENSSDUG00000006590	polr3c	99	61.698	ENSMOCG00000000997	Polr3c	99	61.698	Microtus_ochrogaster
ENSSDUG00000006590	polr3c	99	89.815	ENSMMOG00000003989	polr3c	100	89.815	Mola_mola
ENSSDUG00000006590	polr3c	99	66.978	ENSMODG00000018745	-	74	67.041	Monodelphis_domestica
ENSSDUG00000006590	polr3c	99	89.890	ENSMALG00000000156	polr3c	99	90.528	Monopterus_albus
ENSSDUG00000006590	polr3c	99	65.789	MGP_CAROLIEiJ_G0025390	Polr3c	99	65.794	Mus_caroli
ENSSDUG00000006590	polr3c	99	65.356	ENSMUSG00000028099	Polr3c	99	65.356	Mus_musculus
ENSSDUG00000006590	polr3c	99	65.414	MGP_PahariEiJ_G0026835	Polr3c	99	65.421	Mus_pahari
ENSSDUG00000006590	polr3c	99	65.226	MGP_SPRETEiJ_G0026337	Polr3c	99	65.234	Mus_spretus
ENSSDUG00000006590	polr3c	99	66.045	ENSMPUG00000000656	POLR3C	99	66.045	Mustela_putorius_furo
ENSSDUG00000006590	polr3c	99	65.356	ENSMLUG00000004060	POLR3C	99	65.356	Myotis_lucifugus
ENSSDUG00000006590	polr3c	99	65.666	ENSNGAG00000013090	Polr3c	99	65.981	Nannospalax_galili
ENSSDUG00000006590	polr3c	99	87.569	ENSNBRG00000003707	polr3c	100	87.569	Neolamprologus_brichardi
ENSSDUG00000006590	polr3c	99	65.672	ENSNLEG00000005645	POLR3C	99	65.672	Nomascus_leucogenys
ENSSDUG00000006590	polr3c	86	73.984	ENSMEUG00000012664	POLR3C	86	73.984	Notamacropus_eugenii
ENSSDUG00000006590	polr3c	99	64.673	ENSOPRG00000004244	POLR3C	99	64.673	Ochotona_princeps
ENSSDUG00000006590	polr3c	99	64.112	ENSODEG00000000304	POLR3C	99	64.112	Octodon_degus
ENSSDUG00000006590	polr3c	99	88.848	ENSONIG00000006370	polr3c	100	88.848	Oreochromis_niloticus
ENSSDUG00000006590	polr3c	67	48.199	ENSOANG00000000559	-	100	48.199	Ornithorhynchus_anatinus
ENSSDUG00000006590	polr3c	99	65.421	ENSOCUG00000003050	POLR3C	99	65.421	Oryctolagus_cuniculus
ENSSDUG00000006590	polr3c	99	85.978	ENSORLG00000010133	polr3c	99	85.978	Oryzias_latipes
ENSSDUG00000006590	polr3c	99	84.375	ENSORLG00020009245	polr3c	99	85.478	Oryzias_latipes_hni
ENSSDUG00000006590	polr3c	99	85.609	ENSORLG00015015223	polr3c	99	85.609	Oryzias_latipes_hsok
ENSSDUG00000006590	polr3c	99	85.556	ENSOMEG00000008558	polr3c	99	85.556	Oryzias_melastigma
ENSSDUG00000006590	polr3c	99	64.728	ENSOGAG00000000209	POLR3C	99	64.739	Otolemur_garnettii
ENSSDUG00000006590	polr3c	99	66.542	ENSOARG00000020588	POLR3C	99	66.542	Ovis_aries
ENSSDUG00000006590	polr3c	99	65.858	ENSPPAG00000025184	POLR3C	99	65.858	Pan_paniscus
ENSSDUG00000006590	polr3c	99	65.804	ENSPPRG00000008809	POLR3C	99	65.804	Panthera_pardus
ENSSDUG00000006590	polr3c	99	65.804	ENSPTIG00000009916	POLR3C	99	65.804	Panthera_tigris_altaica
ENSSDUG00000006590	polr3c	99	65.672	ENSPTRG00000001208	POLR3C	99	65.672	Pan_troglodytes
ENSSDUG00000006590	polr3c	99	65.672	ENSPANG00000019404	POLR3C	99	65.672	Papio_anubis
ENSSDUG00000006590	polr3c	99	74.861	ENSPKIG00000014883	polr3c	99	74.861	Paramormyrops_kingsleyae
ENSSDUG00000006590	polr3c	99	65.356	ENSPSIG00000004694	POLR3C	99	65.981	Pelodiscus_sinensis
ENSSDUG00000006590	polr3c	99	85.794	ENSPMGG00000007761	polr3c	99	85.794	Periophthalmus_magnuspinnatus
ENSSDUG00000006590	polr3c	99	65.414	ENSPEMG00000016322	Polr3c	99	65.421	Peromyscus_maniculatus_bairdii
ENSSDUG00000006590	polr3c	99	60.668	ENSPMAG00000006993	polr3c	99	60.668	Petromyzon_marinus
ENSSDUG00000006590	polr3c	99	66.978	ENSPCIG00000011954	POLR3C	99	67.041	Phascolarctos_cinereus
ENSSDUG00000006590	polr3c	99	84.826	ENSPFOG00000014106	polr3c	100	86.314	Poecilia_formosa
ENSSDUG00000006590	polr3c	99	86.629	ENSPLAG00000018932	polr3c	100	87.194	Poecilia_latipinna
ENSSDUG00000006590	polr3c	99	85.009	ENSPMEG00000023273	polr3c	100	86.131	Poecilia_mexicana
ENSSDUG00000006590	polr3c	99	85.926	ENSPREG00000017050	polr3c	100	86.481	Poecilia_reticulata
ENSSDUG00000006590	polr3c	99	65.858	ENSPPYG00000000936	POLR3C	99	65.858	Pongo_abelii
ENSSDUG00000006590	polr3c	90	65.839	ENSPCAG00000010501	POLR3C	99	66.119	Procavia_capensis
ENSSDUG00000006590	polr3c	99	59.012	ENSPCOG00000024937	POLR3C	99	59.357	Propithecus_coquereli
ENSSDUG00000006590	polr3c	99	65.478	ENSPVAG00000014483	POLR3C	99	65.485	Pteropus_vampyrus
ENSSDUG00000006590	polr3c	99	87.934	ENSPNYG00000004504	polr3c	100	87.934	Pundamilia_nyererei
ENSSDUG00000006590	polr3c	98	78.277	ENSPNAG00000018675	polr3c	99	78.637	Pygocentrus_nattereri
ENSSDUG00000006590	polr3c	99	65.478	ENSRNOG00000033560	Polr3c	99	65.607	Rattus_norvegicus
ENSSDUG00000006590	polr3c	99	65.299	ENSRBIG00000035432	POLR3C	99	65.485	Rhinopithecus_bieti
ENSSDUG00000006590	polr3c	99	65.299	ENSRROG00000039959	POLR3C	99	65.485	Rhinopithecus_roxellana
ENSSDUG00000006590	polr3c	90	64.389	ENSSBOG00000028429	POLR3C	99	64.389	Saimiri_boliviensis_boliviensis
ENSSDUG00000006590	polr3c	99	66.791	ENSSHAG00000018565	POLR3C	99	66.854	Sarcophilus_harrisii
ENSSDUG00000006590	polr3c	99	77.095	ENSSFOG00015021863	polr3c	99	76.654	Scleropages_formosus
ENSSDUG00000006590	polr3c	99	90.824	ENSSMAG00000016000	polr3c	99	91.257	Scophthalmus_maximus
ENSSDUG00000006590	polr3c	100	96.283	ENSSLDG00000015614	polr3c	100	96.283	Seriola_lalandi_dorsalis
ENSSDUG00000006590	polr3c	62	71.471	ENSSARG00000014380	POLR3C	99	71.471	Sorex_araneus
ENSSDUG00000006590	polr3c	99	66.168	ENSSPUG00000001834	POLR3C	99	66.168	Sphenodon_punctatus
ENSSDUG00000006590	polr3c	99	91.165	ENSSPAG00000022520	polr3c	99	91.165	Stegastes_partitus
ENSSDUG00000006590	polr3c	99	65.607	ENSSSCG00000006691	POLR3C	99	65.607	Sus_scrofa
ENSSDUG00000006590	polr3c	99	60.487	ENSTGUG00000016941	POLR3C	99	61.049	Taeniopygia_guttata
ENSSDUG00000006590	polr3c	99	85.529	ENSTRUG00000010726	polr3c	100	85.900	Takifugu_rubripes
ENSSDUG00000006590	polr3c	99	87.199	ENSTNIG00000019501	polr3c	100	87.199	Tetraodon_nigroviridis
ENSSDUG00000006590	polr3c	73	67.595	ENSTBEG00000015610	POLR3C	99	67.337	Tupaia_belangeri
ENSSDUG00000006590	polr3c	54	65.574	ENSTTRG00000009216	POLR3C	55	65.574	Tursiops_truncatus
ENSSDUG00000006590	polr3c	99	66.041	ENSUAMG00000021906	POLR3C	99	66.045	Ursus_americanus
ENSSDUG00000006590	polr3c	99	66.041	ENSUMAG00000010180	POLR3C	99	66.045	Ursus_maritimus
ENSSDUG00000006590	polr3c	99	65.666	ENSVVUG00000007421	POLR3C	99	65.666	Vulpes_vulpes
ENSSDUG00000006590	polr3c	99	80.488	ENSXCOG00000019524	polr3c	100	80.488	Xiphophorus_couchianus
ENSSDUG00000006590	polr3c	99	84.249	ENSXMAG00000016215	polr3c	100	85.584	Xiphophorus_maculatus