EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000006618 (Gene tree)
Gene ID: 111218799
Gene Symbol: RAB17
Alias: -
Full Name: ras-related protein Rab-17-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 3167 bases
Position: chrBDQW01000052.1:948465-951631
Accession: 111218799
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000008998	MMR_HSR1	PF01926.23	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000009174	RAB17-201	684	XM_022741276	ENSSDUP00000008998	227 (aa)	XP_022596997	UPI000BBEEAC2

Gene Model

Click here to download ENSSDUG00000006618's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000006618's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000006618	RAB17	56	32.824	ENSSDUG00000005037	-	61	32.824
ENSSDUG00000006618	RAB17	60	32.867	ENSSDUG00000005148	rab20	50	32.867
ENSSDUG00000006618	RAB17	81	31.383	ENSSDUG00000016760	rab34b	58	31.383
ENSSDUG00000006618	RAB17	66	46.000	ENSSDUG00000009735	rab25a	71	46.000
ENSSDUG00000006618	RAB17	72	38.788	ENSSDUG00000013724	rab2a	77	38.788
ENSSDUG00000006618	RAB17	70	35.404	ENSSDUG00000004950	rab35b	79	35.404
ENSSDUG00000006618	RAB17	66	41.060	ENSSDUG00000005960	rab18b	73	41.060
ENSSDUG00000006618	RAB17	86	32.487	ENSSDUG00000022535	RAB1A	96	32.143
ENSSDUG00000006618	RAB17	86	32.178	ENSSDUG00000008011	-	95	32.178
ENSSDUG00000006618	RAB17	78	37.222	ENSSDUG00000008505	rab12	74	37.222
ENSSDUG00000006618	RAB17	74	39.053	ENSSDUG00000009251	rab6bb	79	39.053
ENSSDUG00000006618	RAB17	74	42.012	ENSSDUG00000006278	rab11al	78	42.012
ENSSDUG00000006618	RAB17	65	33.557	ENSSDUG00000014082	si:cabz01085950.1	74	33.557
ENSSDUG00000006618	RAB17	58	30.303	ENSSDUG00000017779	kras	75	32.168
ENSSDUG00000006618	RAB17	52	40.650	ENSSDUG00000014765	rabl2	53	40.650
ENSSDUG00000006618	RAB17	69	36.709	ENSSDUG00000013325	rab30	77	36.709
ENSSDUG00000006618	RAB17	73	39.521	ENSSDUG00000013496	-	78	39.521
ENSSDUG00000006618	RAB17	78	41.111	ENSSDUG00000002934	-	82	41.111
ENSSDUG00000006618	RAB17	89	36.408	ENSSDUG00000018970	RAB6B	94	36.408
ENSSDUG00000006618	RAB17	55	30.075	ENSSDUG00000011151	-	63	30.075
ENSSDUG00000006618	RAB17	71	31.902	ENSSDUG00000023508	rab23	74	35.294
ENSSDUG00000006618	RAB17	50	33.884	ENSSDUG00000017824	-	85	35.659
ENSSDUG00000006618	RAB17	73	33.133	ENSSDUG00000004698	rab1ba	82	33.133
ENSSDUG00000006618	RAB17	68	33.125	ENSSDUG00000006543	RAB29	80	33.125
ENSSDUG00000006618	RAB17	74	42.012	ENSSDUG00000002965	rab11ba	78	41.667
ENSSDUG00000006618	RAB17	73	32.738	ENSSDUG00000011851	rab42a	77	32.738
ENSSDUG00000006618	RAB17	75	38.372	ENSSDUG00000004551	rab14	79	38.372
ENSSDUG00000006618	RAB17	66	32.258	ENSSDUG00000019885	-	64	32.258
ENSSDUG00000006618	RAB17	70	35.802	ENSSDUG00000005627	rab15	75	35.802
ENSSDUG00000006618	RAB17	73	50.000	ENSSDUG00000009835	rab5aa	76	50.000
ENSSDUG00000006618	RAB17	65	45.638	ENSSDUG00000006260	rab25b	76	45.638
ENSSDUG00000006618	RAB17	63	38.889	ENSSDUG00000014091	-	68	38.889
ENSSDUG00000006618	RAB17	51	34.426	ENSSDUG00000014258	RAP2B	88	36.154
ENSSDUG00000006618	RAB17	58	38.971	ENSSDUG00000019738	si:dkey-13a21.4	65	38.971
ENSSDUG00000006618	RAB17	72	35.152	ENSSDUG00000004633	RAB15	77	35.152
ENSSDUG00000006618	RAB17	71	34.356	ENSSDUG00000006307	-	85	34.783
ENSSDUG00000006618	RAB17	79	40.556	ENSSDUG00000002580	rab11a	82	40.556
ENSSDUG00000006618	RAB17	92	32.701	ENSSDUG00000016888	rab1ab	95	32.701
ENSSDUG00000006618	RAB17	75	38.953	ENSSDUG00000013050	-	79	38.953
ENSSDUG00000006618	RAB17	70	32.727	ENSSDUG00000008151	zgc:101559	71	32.727
ENSSDUG00000006618	RAB17	75	30.994	ENSSDUG00000009122	rheb	92	30.994
ENSSDUG00000006618	RAB17	70	32.919	ENSSDUG00000005719	si:dkey-16l2.16	95	30.348
ENSSDUG00000006618	RAB17	84	35.417	ENSSDUG00000021882	rab6ba	88	35.417
ENSSDUG00000006618	RAB17	72	30.952	ENSSDUG00000004119	rab36	55	30.952
ENSSDUG00000006618	RAB17	74	42.012	ENSSDUG00000013558	rab11bb	77	42.012
ENSSDUG00000006618	RAB17	75	36.047	ENSSDUG00000004445	zgc:171927	80	36.047
ENSSDUG00000006618	RAB17	75	39.884	ENSSDUG00000017131	rab22a	89	39.884
ENSSDUG00000006618	RAB17	74	49.438	ENSSDUG00000023008	rab5c	80	49.438
ENSSDUG00000006618	RAB17	66	39.735	ENSSDUG00000003823	rab18a	74	39.735
ENSSDUG00000006618	RAB17	78	30.435	ENSSDUG00000003036	dnajc27	67	30.435
ENSSDUG00000006618	RAB17	59	34.058	ENSSDUG00000007575	rab9b	67	34.058

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000006618	RAB17	100	76.652	ENSACIG00000006949	RAB17	100	76.652	Amphilophus_citrinellus
ENSSDUG00000006618	RAB17	100	76.652	ENSAOCG00000009167	-	100	76.652	Amphiprion_ocellaris
ENSSDUG00000006618	RAB17	100	76.652	ENSAPEG00000002915	RAB17	100	76.652	Amphiprion_percula
ENSSDUG00000006618	RAB17	90	43.689	ENSACAG00000004554	RAB17	92	43.689	Anolis_carolinensis
ENSSDUG00000006618	RAB17	100	75.330	ENSACLG00000001218	RAB17	100	75.330	Astatotilapia_calliptera
ENSSDUG00000006618	RAB17	75	48.824	ENSFCAG00000012724	RAB17	80	48.824	Felis_catus
ENSSDUG00000006618	RAB17	74	49.112	ENSFALG00000012783	RAB17	79	49.112	Ficedula_albicollis
ENSSDUG00000006618	RAB17	70	53.125	ENSGALG00000003899	RAB17	75	53.125	Gallus_gallus
ENSSDUG00000006618	RAB17	100	75.330	ENSHBUG00000001462	RAB17	100	75.330	Haplochromis_burtoni
ENSSDUG00000006618	RAB17	89	72.947	ENSLBEG00000027691	RAB17	90	72.947	Labrus_bergylta
ENSSDUG00000006618	RAB17	100	75.330	ENSMZEG00005013677	RAB17	100	75.330	Maylandia_zebra
ENSSDUG00000006618	RAB17	70	53.750	ENSMGAG00000003135	RAB17	74	53.750	Meleagris_gallopavo
ENSSDUG00000006618	RAB17	73	53.939	ENSMOCG00000006448	Rab17	77	53.939	Microtus_ochrogaster
ENSSDUG00000006618	RAB17	100	81.057	ENSMMOG00000019258	RAB17	100	81.057	Mola_mola
ENSSDUG00000006618	RAB17	86	46.667	ENSMODG00000008949	RAB17	90	46.667	Monodelphis_domestica
ENSSDUG00000006618	RAB17	95	62.963	ENSMALG00000007905	RAB17	89	62.963	Monopterus_albus
ENSSDUG00000006618	RAB17	91	75.728	ENSNBRG00000017793	RAB17	92	75.728	Neolamprologus_brichardi
ENSSDUG00000006618	RAB17	69	51.282	ENSMEUG00000005002	RAB17	89	51.282	Notamacropus_eugenii
ENSSDUG00000006618	RAB17	100	76.652	ENSONIG00000016776	RAB17	100	76.652	Oreochromis_niloticus
ENSSDUG00000006618	RAB17	71	49.383	ENSPPRG00000003974	RAB17	76	49.383	Panthera_pardus
ENSSDUG00000006618	RAB17	71	48.148	ENSPTIG00000014452	RAB17	76	48.148	Panthera_tigris_altaica
ENSSDUG00000006618	RAB17	69	49.682	ENSPSIG00000016995	RAB17	66	49.682	Pelodiscus_sinensis
ENSSDUG00000006618	RAB17	80	47.802	ENSPCIG00000021558	-	62	46.703	Phascolarctos_cinereus
ENSSDUG00000006618	RAB17	100	75.330	ENSPNYG00000011135	RAB17	100	75.330	Pundamilia_nyererei
ENSSDUG00000006618	RAB17	89	43.842	ENSSHAG00000009306	RAB17	93	43.842	Sarcophilus_harrisii
ENSSDUG00000006618	RAB17	100	96.916	ENSSLDG00000020918	RAB17	100	96.916	Seriola_lalandi_dorsalis
ENSSDUG00000006618	RAB17	57	55.385	ENSSPUG00000015409	RAB17	60	55.385	Sphenodon_punctatus
ENSSDUG00000006618	RAB17	100	75.771	ENSSPAG00000022624	-	100	75.771	Stegastes_partitus
ENSSDUG00000006618	RAB17	74	50.296	ENSTGUG00000003786	RAB17	80	50.296	Taeniopygia_guttata