EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000006631 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 5862 bases
Position: chrBDQW01000161.1:712871-718732
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000009055	Sua5_yciO_yrdC	PF01300.18	1.1e-27	1	1
ENSSDUP00000009037	Sua5_yciO_yrdC	PF01300.18	2.4e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000009213	-	711	-	ENSSDUP00000009037	236 (aa)	-	-
ENSSDUT00000009232	-	591	-	ENSSDUP00000009055	196 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000006631's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000006631's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000006631	-	91	80.976	ENSSDUG00000006736	-	97	85.646

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000006631	-	62	30.405	ENSG00000196449	YRDC	50	30.405	Homo_sapiens
ENSSDUG00000006631	-	65	31.288	ENSATEG00000010086	yrdc	57	31.288	Anabas_testudineus
ENSSDUG00000006631	-	66	30.147	ENSANAG00000028788	-	56	30.714	Aotus_nancymaae
ENSSDUG00000006631	-	64	31.538	ENSAMXG00000037791	yrdc	53	32.353	Astyanax_mexicanus
ENSSDUG00000006631	-	64	30.303	WBGene00012997	Y48C3A.18	70	30.303	Caenorhabditis_elegans
ENSSDUG00000006631	-	61	30.137	ENSCAFG00000003253	YRDC	50	30.137	Canis_familiaris
ENSSDUG00000006631	-	61	31.507	ENSCAFG00020007843	YRDC	50	31.507	Canis_lupus_dingo
ENSSDUG00000006631	-	76	31.098	ENSCHIG00000007882	YRDC	58	31.098	Capra_hircus
ENSSDUG00000006631	-	62	30.405	ENSCATG00000036928	YRDC	50	30.405	Cercocebus_atys
ENSSDUG00000006631	-	61	30.380	ENSCLAG00000015012	YRDC	57	30.994	Chinchilla_lanigera
ENSSDUG00000006631	-	62	30.405	ENSCSAG00000001116	YRDC	50	30.405	Chlorocebus_sabaeus
ENSSDUG00000006631	-	70	30.612	ENSCHOG00000005500	YRDC	67	31.126	Choloepus_hoffmanni
ENSSDUG00000006631	-	64	35.385	ENSCPBG00000018446	YRDC	55	36.029	Chrysemys_picta_bellii
ENSSDUG00000006631	-	64	33.588	ENSCING00000007564	-	60	33.588	Ciona_intestinalis
ENSSDUG00000006631	-	64	34.351	ENSCSAVG00000009982	-	60	35.036	Ciona_savignyi
ENSSDUG00000006631	-	70	30.556	ENSCANG00000031111	YRDC	50	31.081	Colobus_angolensis_palliatus
ENSSDUG00000006631	-	64	32.331	ENSDARG00000041428	yrdc	54	31.818	Danio_rerio
ENSSDUG00000006631	-	67	30.952	ENSDNOG00000038789	-	63	30.952	Dasypus_novemcinctus
ENSSDUG00000006631	-	60	33.065	FBgn0061361	CG33786	50	33.846	Drosophila_melanogaster
ENSSDUG00000006631	-	63	31.538	ENSEBUG00000014080	yrdc	53	33.088	Eptatretus_burgeri
ENSSDUG00000006631	-	78	31.646	ENSELUG00000018071	yrdc	53	31.548	Esox_lucius
ENSSDUG00000006631	-	62	31.081	ENSFCAG00000011018	YRDC	50	31.081	Felis_catus
ENSSDUG00000006631	-	89	59.813	ENSFALG00000011333	-	64	59.583	Ficedula_albicollis
ENSSDUG00000006631	-	60	32.258	ENSFALG00000000964	YRDC	57	33.083	Ficedula_albicollis
ENSSDUG00000006631	-	64	31.852	ENSGMOG00000015635	yrdc	62	31.852	Gadus_morhua
ENSSDUG00000006631	-	81	37.688	ENSGMOG00000006012	-	83	39.698	Gadus_morhua
ENSSDUG00000006631	-	64	31.818	ENSGALG00000029001	YRDC	50	32.353	Gallus_gallus
ENSSDUG00000006631	-	82	39.000	ENSGALG00000054964	-	77	40.500	Gallus_gallus
ENSSDUG00000006631	-	92	55.645	ENSGALG00000025899	-	84	55.645	Gallus_gallus
ENSSDUG00000006631	-	63	32.031	ENSGACG00000013878	yrdc	53	32.090	Gasterosteus_aculeatus
ENSSDUG00000006631	-	81	36.181	ENSGACG00000018246	-	77	37.688	Gasterosteus_aculeatus
ENSSDUG00000006631	-	72	30.128	ENSGAGG00000014968	YRDC	67	30.864	Gopherus_agassizii
ENSSDUG00000006631	-	62	30.405	ENSGGOG00000007619	YRDC	50	30.405	Gorilla_gorilla
ENSSDUG00000006631	-	67	30.409	ENSHGLG00000014075	YRDC	57	30.409	Heterocephalus_glaber_female
ENSSDUG00000006631	-	71	30.189	ENSHGLG00100002734	YRDC	55	30.675	Heterocephalus_glaber_male
ENSSDUG00000006631	-	67	30.216	ENSHCOG00000006598	yrdc	54	32.168	Hippocampus_comes
ENSSDUG00000006631	-	74	33.548	ENSIPUG00000014985	yrdc	63	33.750	Ictalurus_punctatus
ENSSDUG00000006631	-	89	62.791	ENSLACG00000017624	si:ch211-153b23.3	71	62.025	Latimeria_chalumnae
ENSSDUG00000006631	-	64	32.847	ENSLACG00000010689	YRDC	59	33.094	Latimeria_chalumnae
ENSSDUG00000006631	-	64	30.534	ENSLOCG00000003321	yrdc	53	31.387	Lepisosteus_oculatus
ENSSDUG00000006631	-	62	31.081	ENSLAFG00000017556	YRDC	50	31.081	Loxodonta_africana
ENSSDUG00000006631	-	66	30.147	ENSMFAG00000003487	YRDC	62	30.714	Macaca_fascicularis
ENSSDUG00000006631	-	62	30.405	ENSMNEG00000029348	YRDC	50	30.405	Macaca_nemestrina
ENSSDUG00000006631	-	64	31.061	ENSMGAG00000002833	YRDC	62	31.618	Meleagris_gallopavo
ENSSDUG00000006631	-	89	57.944	ENSMGAG00000005489	-	64	56.667	Meleagris_gallopavo
ENSSDUG00000006631	-	71	30.137	ENSMOCG00000000164	-	55	30.137	Microtus_ochrogaster
ENSSDUG00000006631	-	67	30.409	MGP_CAROLIEiJ_G0026453	Yrdc	57	30.409	Mus_caroli
ENSSDUG00000006631	-	71	30.872	MGP_SPRETEiJ_G0027432	Yrdc	67	30.872	Mus_spretus
ENSSDUG00000006631	-	63	30.667	ENSMPUG00000014542	YRDC	57	30.667	Mustela_putorius_furo
ENSSDUG00000006631	-	76	31.098	ENSODEG00000007401	YRDC	67	30.457	Octodon_degus
ENSSDUG00000006631	-	64	30.000	ENSONIG00000016213	yrdc	54	31.618	Oreochromis_niloticus
ENSSDUG00000006631	-	76	30.247	ENSOGAG00000030474	YRDC	58	30.952	Otolemur_garnettii
ENSSDUG00000006631	-	76	31.098	ENSOARG00000019873	YRDC	57	31.098	Ovis_aries
ENSSDUG00000006631	-	62	31.081	ENSPPRG00000007752	YRDC	50	31.081	Panthera_pardus
ENSSDUG00000006631	-	62	30.405	ENSPTRG00000000557	YRDC	50	30.405	Pan_troglodytes
ENSSDUG00000006631	-	66	34.559	ENSPMGG00000004184	yrdc	52	34.559	Periophthalmus_magnuspinnatus
ENSSDUG00000006631	-	63	30.000	ENSPMAG00000002905	yrdc	69	30.370	Petromyzon_marinus
ENSSDUG00000006631	-	70	31.250	ENSPCAG00000016850	YRDC	50	31.757	Procavia_capensis
ENSSDUG00000006631	-	62	31.081	ENSPVAG00000010147	YRDC	50	31.081	Pteropus_vampyrus
ENSSDUG00000006631	-	75	32.237	ENSPNAG00000015625	yrdc	58	32.237	Pygocentrus_nattereri
ENSSDUG00000006631	-	67	30.357	ENSRNOG00000025424	Yrdc	57	30.357	Rattus_norvegicus
ENSSDUG00000006631	-	62	30.405	ENSRBIG00000032289	YRDC	50	30.405	Rhinopithecus_bieti
ENSSDUG00000006631	-	66	33.088	ENSSFOG00015006128	yrdc	58	33.803	Scleropages_formosus
ENSSDUG00000006631	-	68	33.333	ENSSMAG00000005195	yrdc	51	34.028	Scophthalmus_maximus
ENSSDUG00000006631	-	100	98.980	ENSSLDG00000008694	-	99	98.980	Seriola_lalandi_dorsalis
ENSSDUG00000006631	-	65	31.343	ENSSPUG00000003946	YRDC	50	32.609	Sphenodon_punctatus
ENSSDUG00000006631	-	66	30.882	ENSUAMG00000006150	YRDC	65	31.429	Ursus_americanus
ENSSDUG00000006631	-	71	31.176	ENSXETG00000014420	yrdc	68	31.176	Xenopus_tropicalis