EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000006671 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-153b23.4 (1 of many)
Alias: fj08f03|fj10b02|im:7041150|wu:fj08f03|wu:fj10b02
Full Name: uncharacterized LOC111226508
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 3188 bases
Position: chrBDQW01000161.1:726553-729740
Accession: 111226508
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000009070	Sua5_yciO_yrdC	PF01300.18	8.5e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000009246	-	2414	XM_022751697	ENSSDUP00000009070	804 (aa)	XP_022607418	-

Gene Model

Click here to download ENSSDUG00000006671's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000006671's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000006671	si:ch211-153b23.4	88	91.321	ENSSDUG00000006842	si:ch211-153b23.4	91	91.321
ENSSDUG00000006671	si:ch211-153b23.4	84	99.112	ENSSDUG00000006931	si:ch211-153b23.4	92	99.112

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000006671	si:ch211-153b23.4	95	88.036	ENSAPOG00000006178	si:ch211-153b23.4	89	88.036	Acanthochromis_polyacanthus
ENSSDUG00000006671	si:ch211-153b23.4	97	87.101	ENSAPOG00000006144	si:ch211-153b23.4	90	88.136	Acanthochromis_polyacanthus
ENSSDUG00000006671	si:ch211-153b23.4	99	86.700	ENSACIG00000006997	si:ch211-153b23.4	93	86.700	Amphilophus_citrinellus
ENSSDUG00000006671	si:ch211-153b23.4	99	81.024	ENSAOCG00000010999	si:ch211-153b23.4	97	81.024	Amphiprion_ocellaris
ENSSDUG00000006671	si:ch211-153b23.4	64	31.002	ENSAOCG00000010974	si:ch211-153b23.3	59	31.002	Amphiprion_ocellaris
ENSSDUG00000006671	si:ch211-153b23.4	99	83.686	ENSAPEG00000014665	si:ch211-153b23.4	94	83.686	Amphiprion_percula
ENSSDUG00000006671	si:ch211-153b23.4	64	30.344	ENSAPEG00000014700	si:ch211-153b23.3	59	30.344	Amphiprion_percula
ENSSDUG00000006671	si:ch211-153b23.4	63	32.453	ENSATEG00000004956	si:ch211-153b23.3	58	32.453	Anabas_testudineus
ENSSDUG00000006671	si:ch211-153b23.4	100	87.639	ENSATEG00000004948	si:ch211-153b23.4	92	87.639	Anabas_testudineus
ENSSDUG00000006671	si:ch211-153b23.4	99	62.189	ENSAPLG00000013596	-	92	62.565	Anas_platyrhynchos
ENSSDUG00000006671	si:ch211-153b23.4	64	32.448	ENSACLG00000005894	si:ch211-153b23.3	59	32.448	Astatotilapia_calliptera
ENSSDUG00000006671	si:ch211-153b23.4	100	83.066	ENSACLG00000005471	si:ch211-153b23.4	92	83.066	Astatotilapia_calliptera
ENSSDUG00000006671	si:ch211-153b23.4	100	73.573	ENSAMXG00000013879	si:ch211-153b23.4	95	73.573	Astyanax_mexicanus
ENSSDUG00000006671	si:ch211-153b23.4	100	82.447	ENSCSEG00000014838	si:ch211-153b23.4	96	82.447	Cynoglossus_semilaevis
ENSSDUG00000006671	si:ch211-153b23.4	63	32.824	ENSCSEG00000014853	si:ch211-153b23.3	58	32.824	Cynoglossus_semilaevis
ENSSDUG00000006671	si:ch211-153b23.4	100	84.224	ENSCVAG00000021145	si:ch211-153b23.4	100	84.224	Cyprinodon_variegatus
ENSSDUG00000006671	si:ch211-153b23.4	100	69.790	ENSDARG00000077169	si:ch211-153b23.4	92	69.790	Danio_rerio
ENSSDUG00000006671	si:ch211-153b23.4	100	71.552	ENSELUG00000004961	si:ch211-153b23.4	91	71.552	Esox_lucius
ENSSDUG00000006671	si:ch211-153b23.4	99	58.137	ENSFALG00000011343	-	92	58.137	Ficedula_albicollis
ENSSDUG00000006671	si:ch211-153b23.4	85	88.384	ENSFHEG00000009888	si:ch211-153b23.4	76	88.384	Fundulus_heteroclitus
ENSSDUG00000006671	si:ch211-153b23.4	99	83.794	ENSFHEG00000010001	si:ch211-153b23.4	100	83.794	Fundulus_heteroclitus
ENSSDUG00000006671	si:ch211-153b23.4	78	30.093	ENSGAFG00000007455	si:ch211-153b23.3	72	30.093	Gambusia_affinis
ENSSDUG00000006671	si:ch211-153b23.4	93	81.976	ENSGAFG00000007442	si:ch211-153b23.4	90	82.095	Gambusia_affinis
ENSSDUG00000006671	si:ch211-153b23.4	100	85.043	ENSGACG00000018253	si:ch211-153b23.4	95	85.043	Gasterosteus_aculeatus
ENSSDUG00000006671	si:ch211-153b23.4	86	64.183	ENSGAGG00000024601	-	93	64.183	Gopherus_agassizii
ENSSDUG00000006671	si:ch211-153b23.4	82	84.139	ENSHBUG00000000013	si:ch211-153b23.4	88	84.139	Haplochromis_burtoni
ENSSDUG00000006671	si:ch211-153b23.4	64	32.448	ENSHBUG00000001760	si:ch211-153b23.3	59	32.448	Haplochromis_burtoni
ENSSDUG00000006671	si:ch211-153b23.4	64	31.286	ENSIPUG00000015213	si:ch211-153b23.3	57	31.549	Ictalurus_punctatus
ENSSDUG00000006671	si:ch211-153b23.4	100	70.530	ENSIPUG00000015205	si:ch211-153b23.4	96	70.530	Ictalurus_punctatus
ENSSDUG00000006671	si:ch211-153b23.4	100	85.785	ENSKMAG00000006919	-	92	85.785	Kryptolebias_marmoratus
ENSSDUG00000006671	si:ch211-153b23.4	98	85.985	ENSKMAG00000006829	si:ch211-153b23.4	98	85.985	Kryptolebias_marmoratus
ENSSDUG00000006671	si:ch211-153b23.4	64	31.418	ENSLBEG00000026324	si:ch211-153b23.3	56	31.418	Labrus_bergylta
ENSSDUG00000006671	si:ch211-153b23.4	100	85.043	ENSLBEG00000026309	si:ch211-153b23.4	93	84.920	Labrus_bergylta
ENSSDUG00000006671	si:ch211-153b23.4	99	64.764	ENSLACG00000017592	si:ch211-153b23.4	96	64.888	Latimeria_chalumnae
ENSSDUG00000006671	si:ch211-153b23.4	100	90.174	ENSMAMG00000009358	si:ch211-153b23.4	99	90.174	Mastacembelus_armatus
ENSSDUG00000006671	si:ch211-153b23.4	99	89.513	ENSMAMG00000009277	si:ch211-153b23.4	96	89.638	Mastacembelus_armatus
ENSSDUG00000006671	si:ch211-153b23.4	63	31.429	ENSMAMG00000009328	si:ch211-153b23.3	58	31.429	Mastacembelus_armatus
ENSSDUG00000006671	si:ch211-153b23.4	100	83.478	ENSMZEG00005011433	si:ch211-153b23.4	99	83.478	Maylandia_zebra
ENSSDUG00000006671	si:ch211-153b23.4	64	32.381	ENSMZEG00005011450	si:ch211-153b23.3	59	32.381	Maylandia_zebra
ENSSDUG00000006671	si:ch211-153b23.4	99	62.531	ENSMGAG00000005478	-	97	62.531	Meleagris_gallopavo
ENSSDUG00000006671	si:ch211-153b23.4	100	84.845	ENSMMOG00000004425	si:ch211-153b23.4	100	84.845	Mola_mola
ENSSDUG00000006671	si:ch211-153b23.4	64	32.448	ENSNBRG00000013370	si:ch211-153b23.3	59	32.448	Neolamprologus_brichardi
ENSSDUG00000006671	si:ch211-153b23.4	99	82.850	ENSNBRG00000013392	si:ch211-153b23.4	100	82.850	Neolamprologus_brichardi
ENSSDUG00000006671	si:ch211-153b23.4	100	83.189	ENSONIG00000017875	si:ch211-153b23.4	93	83.189	Oreochromis_niloticus
ENSSDUG00000006671	si:ch211-153b23.4	76	30.109	ENSORLG00000006161	si:ch211-153b23.3	73	30.109	Oryzias_latipes
ENSSDUG00000006671	si:ch211-153b23.4	99	82.673	ENSORLG00000006169	si:ch211-153b23.4	92	82.673	Oryzias_latipes
ENSSDUG00000006671	si:ch211-153b23.4	99	83.045	ENSORLG00020009905	si:ch211-153b23.4	92	83.168	Oryzias_latipes_hni
ENSSDUG00000006671	si:ch211-153b23.4	99	82.921	ENSORLG00015003709	si:ch211-153b23.4	92	82.921	Oryzias_latipes_hsok
ENSSDUG00000006671	si:ch211-153b23.4	76	30.374	ENSOMEG00000007661	si:ch211-153b23.3	73	30.374	Oryzias_melastigma
ENSSDUG00000006671	si:ch211-153b23.4	100	83.189	ENSOMEG00000007682	si:ch211-153b23.4	92	83.189	Oryzias_melastigma
ENSSDUG00000006671	si:ch211-153b23.4	100	71.358	ENSPKIG00000025681	si:ch211-153b23.4	94	71.358	Paramormyrops_kingsleyae
ENSSDUG00000006671	si:ch211-153b23.4	100	67.778	ENSPKIG00000014429	si:ch211-153b23.4	96	67.618	Paramormyrops_kingsleyae
ENSSDUG00000006671	si:ch211-153b23.4	98	66.625	ENSPMGG00000001313	si:ch211-153b23.4	85	66.840	Periophthalmus_magnuspinnatus
ENSSDUG00000006671	si:ch211-153b23.4	64	32.514	ENSPFOG00000012289	si:ch211-153b23.3	59	32.514	Poecilia_formosa
ENSSDUG00000006671	si:ch211-153b23.4	84	84.412	ENSPFOG00000012164	si:ch211-153b23.4	95	84.412	Poecilia_formosa
ENSSDUG00000006671	si:ch211-153b23.4	63	32.136	ENSPLAG00000016320	si:ch211-153b23.3	59	32.514	Poecilia_latipinna
ENSSDUG00000006671	si:ch211-153b23.4	99	82.397	ENSPLAG00000016295	si:ch211-153b23.4	99	82.397	Poecilia_latipinna
ENSSDUG00000006671	si:ch211-153b23.4	64	32.203	ENSPMEG00000008884	si:ch211-153b23.3	59	32.203	Poecilia_mexicana
ENSSDUG00000006671	si:ch211-153b23.4	97	80.666	ENSPMEG00000007538	si:ch211-153b23.4	95	80.666	Poecilia_mexicana
ENSSDUG00000006671	si:ch211-153b23.4	100	83.354	ENSPNYG00000000250	si:ch211-153b23.4	99	83.354	Pundamilia_nyererei
ENSSDUG00000006671	si:ch211-153b23.4	64	32.448	ENSPNYG00000000251	si:ch211-153b23.3	59	32.448	Pundamilia_nyererei
ENSSDUG00000006671	si:ch211-153b23.4	100	73.613	ENSPNAG00000019554	si:ch211-153b23.4	92	73.613	Pygocentrus_nattereri
ENSSDUG00000006671	si:ch211-153b23.4	54	34.755	ENSSFOG00015009030	-	82	33.273	Scleropages_formosus
ENSSDUG00000006671	si:ch211-153b23.4	100	68.940	ENSSFOG00015003920	-	93	68.940	Scleropages_formosus
ENSSDUG00000006671	si:ch211-153b23.4	100	74.289	ENSSFOG00015010891	si:ch211-153b23.4	93	74.289	Scleropages_formosus
ENSSDUG00000006671	si:ch211-153b23.4	64	32.827	ENSSFOG00015010910	si:ch211-153b23.3	60	32.827	Scleropages_formosus
ENSSDUG00000006671	si:ch211-153b23.4	100	86.897	ENSSMAG00000010067	si:ch211-153b23.4	94	86.897	Scophthalmus_maximus
ENSSDUG00000006671	si:ch211-153b23.4	63	32.122	ENSSMAG00000005446	si:ch211-153b23.3	58	32.122	Scophthalmus_maximus
ENSSDUG00000006671	si:ch211-153b23.4	99	61.395	ENSTGUG00000005499	-	98	61.338	Taeniopygia_guttata
ENSSDUG00000006671	si:ch211-153b23.4	99	82.506	ENSTRUG00000003247	si:ch211-153b23.4	100	82.506	Takifugu_rubripes
ENSSDUG00000006671	si:ch211-153b23.4	63	32.890	ENSTRUG00000020530	si:ch211-153b23.3	59	32.700	Takifugu_rubripes
ENSSDUG00000006671	si:ch211-153b23.4	100	80.741	ENSTNIG00000008958	si:ch211-153b23.4	97	80.741	Tetraodon_nigroviridis
ENSSDUG00000006671	si:ch211-153b23.4	100	56.870	ENSXETG00000004489	-	91	56.870	Xenopus_tropicalis
ENSSDUG00000006671	si:ch211-153b23.4	99	82.960	ENSXMAG00000021388	si:ch211-153b23.4	97	83.066	Xiphophorus_maculatus
ENSSDUG00000006671	si:ch211-153b23.4	99	83.085	ENSXMAG00000009416	-	95	83.085	Xiphophorus_maculatus